Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4057 and Echvi_4058 are separated by 42 nucleotides Echvi_4058 and Echvi_4059 overlap by 4 nucleotides
Echvi_4057: Echvi_4057 - hypothetical protein, at 4,865,232 to 4,867,073
_4057
Echvi_4058: Echvi_4058 - PspC domain., at 4,867,116 to 4,867,334
_4058
Echvi_4059: Echvi_4059 - Predicted glycosyltransferases, at 4,867,331 to 4,868,338
_4059
Position (kb)
4867
4868 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4866.121 kb on + strand, within Echvi_4057 at 4866.141 kb on + strand, within Echvi_4057 at 4866.141 kb on + strand, within Echvi_4057 at 4866.142 kb on - strand, within Echvi_4057 at 4866.151 kb on + strand, within Echvi_4057 at 4866.152 kb on - strand, within Echvi_4057 at 4866.170 kb on + strand, within Echvi_4057 at 4866.170 kb on + strand, within Echvi_4057 at 4866.170 kb on + strand, within Echvi_4057 at 4866.170 kb on + strand, within Echvi_4057 at 4866.170 kb on + strand, within Echvi_4057 at 4866.171 kb on - strand, within Echvi_4057 at 4866.171 kb on - strand, within Echvi_4057 at 4866.174 kb on + strand, within Echvi_4057 at 4866.174 kb on + strand, within Echvi_4057 at 4866.174 kb on + strand, within Echvi_4057 at 4866.175 kb on - strand, within Echvi_4057 at 4866.273 kb on + strand, within Echvi_4057 at 4866.274 kb on - strand, within Echvi_4057 at 4866.340 kb on + strand, within Echvi_4057 at 4866.341 kb on - strand, within Echvi_4057 at 4866.384 kb on - strand, within Echvi_4057 at 4866.482 kb on - strand, within Echvi_4057 at 4866.484 kb on + strand, within Echvi_4057 at 4866.512 kb on + strand, within Echvi_4057 at 4866.526 kb on + strand, within Echvi_4057 at 4866.527 kb on - strand, within Echvi_4057 at 4866.527 kb on - strand, within Echvi_4057 at 4866.535 kb on + strand, within Echvi_4057 at 4866.535 kb on + strand, within Echvi_4057 at 4866.535 kb on + strand, within Echvi_4057 at 4866.535 kb on + strand, within Echvi_4057 at 4866.535 kb on + strand, within Echvi_4057 at 4866.536 kb on - strand, within Echvi_4057 at 4866.536 kb on - strand, within Echvi_4057 at 4866.536 kb on - strand, within Echvi_4057 at 4866.536 kb on - strand, within Echvi_4057 at 4866.536 kb on - strand, within Echvi_4057 at 4866.536 kb on - strand, within Echvi_4057 at 4866.543 kb on + strand, within Echvi_4057 at 4866.629 kb on - strand, within Echvi_4057 at 4866.629 kb on - strand, within Echvi_4057 at 4866.635 kb on + strand, within Echvi_4057 at 4866.635 kb on + strand, within Echvi_4057 at 4866.635 kb on + strand, within Echvi_4057 at 4866.635 kb on + strand, within Echvi_4057 at 4866.635 kb on + strand, within Echvi_4057 at 4866.635 kb on + strand, within Echvi_4057 at 4866.636 kb on - strand, within Echvi_4057 at 4866.636 kb on - strand, within Echvi_4057 at 4866.636 kb on - strand, within Echvi_4057 at 4866.636 kb on - strand, within Echvi_4057 at 4866.638 kb on + strand, within Echvi_4057 at 4866.641 kb on - strand, within Echvi_4057 at 4866.641 kb on - strand, within Echvi_4057 at 4866.702 kb on - strand, within Echvi_4057 at 4866.713 kb on - strand, within Echvi_4057 at 4866.836 kb on + strand, within Echvi_4057 at 4866.839 kb on - strand, within Echvi_4057 at 4866.884 kb on - strand, within Echvi_4057 at 4866.935 kb on + strand at 4866.936 kb on - strand at 4866.936 kb on - strand at 4867.068 kb on - strand at 4867.068 kb on - strand at 4867.076 kb on + strand at 4867.077 kb on - strand at 4867.077 kb on - strand at 4867.077 kb on - strand at 4867.080 kb on + strand at 4867.082 kb on + strand at 4867.085 kb on + strand at 4867.222 kb on - strand, within Echvi_4058 at 4867.233 kb on - strand, within Echvi_4058 at 4867.236 kb on - strand, within Echvi_4058 at 4867.261 kb on - strand, within Echvi_4058 at 4867.311 kb on - strand, within Echvi_4058 at 4867.311 kb on - strand, within Echvi_4058 at 4867.344 kb on + strand at 4867.345 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 4,866,121 + Echvi_4057 0.48 -0.4 4,866,141 + Echvi_4057 0.49 +0.0 4,866,141 + Echvi_4057 0.49 +0.4 4,866,142 - Echvi_4057 0.49 -0.7 4,866,151 + Echvi_4057 0.50 +1.2 4,866,152 - Echvi_4057 0.50 -1.1 4,866,170 + Echvi_4057 0.51 -2.1 4,866,170 + Echvi_4057 0.51 -0.8 4,866,170 + Echvi_4057 0.51 +1.6 4,866,170 + Echvi_4057 0.51 -0.3 4,866,170 + Echvi_4057 0.51 +0.1 4,866,171 - Echvi_4057 0.51 -1.6 4,866,171 - Echvi_4057 0.51 -0.4 4,866,174 + Echvi_4057 0.51 -1.3 4,866,174 + Echvi_4057 0.51 -2.2 4,866,174 + Echvi_4057 0.51 -0.7 4,866,175 - Echvi_4057 0.51 -2.4 4,866,273 + Echvi_4057 0.57 +1.3 4,866,274 - Echvi_4057 0.57 +0.3 4,866,340 + Echvi_4057 0.60 +0.7 4,866,341 - Echvi_4057 0.60 +1.3 4,866,384 - Echvi_4057 0.63 -2.2 4,866,482 - Echvi_4057 0.68 +1.4 4,866,484 + Echvi_4057 0.68 -0.3 4,866,512 + Echvi_4057 0.69 -1.0 4,866,526 + Echvi_4057 0.70 +1.0 4,866,527 - Echvi_4057 0.70 +0.1 4,866,527 - Echvi_4057 0.70 +1.4 4,866,535 + Echvi_4057 0.71 +0.2 4,866,535 + Echvi_4057 0.71 -0.9 4,866,535 + Echvi_4057 0.71 -0.8 4,866,535 + Echvi_4057 0.71 +1.0 4,866,535 + Echvi_4057 0.71 -0.9 4,866,536 - Echvi_4057 0.71 -1.4 4,866,536 - Echvi_4057 0.71 +0.5 4,866,536 - Echvi_4057 0.71 +1.7 4,866,536 - Echvi_4057 0.71 +1.0 4,866,536 - Echvi_4057 0.71 -0.6 4,866,536 - Echvi_4057 0.71 +1.6 4,866,543 + Echvi_4057 0.71 +1.0 4,866,629 - Echvi_4057 0.76 +2.0 4,866,629 - Echvi_4057 0.76 +0.9 4,866,635 + Echvi_4057 0.76 -0.3 4,866,635 + Echvi_4057 0.76 +0.1 4,866,635 + Echvi_4057 0.76 +2.6 4,866,635 + Echvi_4057 0.76 +0.3 4,866,635 + Echvi_4057 0.76 -0.1 4,866,635 + Echvi_4057 0.76 -2.1 4,866,636 - Echvi_4057 0.76 +1.0 4,866,636 - Echvi_4057 0.76 -0.3 4,866,636 - Echvi_4057 0.76 -1.0 4,866,636 - Echvi_4057 0.76 -1.5 4,866,638 + Echvi_4057 0.76 -3.1 4,866,641 - Echvi_4057 0.76 -1.3 4,866,641 - Echvi_4057 0.76 -0.8 4,866,702 - Echvi_4057 0.80 -1.6 4,866,713 - Echvi_4057 0.80 +0.6 4,866,836 + Echvi_4057 0.87 -1.9 4,866,839 - Echvi_4057 0.87 -1.8 4,866,884 - Echvi_4057 0.90 -1.0 4,866,935 + -1.2 4,866,936 - -0.4 4,866,936 - -0.3 4,867,068 - -1.1 4,867,068 - -0.9 4,867,076 + +0.0 4,867,077 - -2.7 4,867,077 - +0.7 4,867,077 - -0.3 4,867,080 + -1.8 4,867,082 + +0.5 4,867,085 + -0.1 4,867,222 - Echvi_4058 0.48 +1.9 4,867,233 - Echvi_4058 0.53 +0.5 4,867,236 - Echvi_4058 0.55 +1.0 4,867,261 - Echvi_4058 0.66 -0.6 4,867,311 - Echvi_4058 0.89 -0.2 4,867,311 - Echvi_4058 0.89 +0.0 4,867,344 + +0.4 4,867,345 - +0.8
Or see this region's nucleotide sequence