Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3759

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_3757 and Echvi_3758 are separated by 152 nucleotidesEchvi_3758 and Echvi_3759 overlap by 1 nucleotidesEchvi_3759 and Echvi_3760 are separated by 26 nucleotidesEchvi_3760 and Echvi_3761 overlap by 16 nucleotides Echvi_3757: Echvi_3757 - Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase, at 4,483,053 to 4,483,562 _3757 Echvi_3758: Echvi_3758 - Predicted ATPases of PP-loop superfamily, at 4,483,715 to 4,484,446 _3758 Echvi_3759: Echvi_3759 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 4,484,446 to 4,485,495 _3759 Echvi_3760: Echvi_3760 - Cobalamin-5-phosphate synthase, at 4,485,522 to 4,486,328 _3760 Echvi_3761: Echvi_3761 - Fructose-2,6-bisphosphatase, at 4,486,313 to 4,486,855 _3761 Position (kb) 4484 4485 4486Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4483.497 kb on + strand, within Echvi_3757at 4483.498 kb on - strand, within Echvi_3757at 4483.561 kb on - strandat 4483.604 kb on + strandat 4483.604 kb on + strandat 4483.604 kb on + strandat 4483.605 kb on - strandat 4483.605 kb on - strandat 4483.605 kb on - strandat 4483.605 kb on - strandat 4483.605 kb on - strandat 4483.609 kb on + strandat 4483.609 kb on + strandat 4483.610 kb on - strandat 4483.613 kb on + strandat 4483.917 kb on + strand, within Echvi_3758at 4483.936 kb on + strand, within Echvi_3758at 4483.946 kb on + strand, within Echvi_3758at 4483.946 kb on + strand, within Echvi_3758at 4483.946 kb on + strand, within Echvi_3758at 4483.946 kb on + strand, within Echvi_3758at 4483.946 kb on + strand, within Echvi_3758at 4483.946 kb on + strand, within Echvi_3758at 4483.947 kb on - strand, within Echvi_3758at 4483.947 kb on - strand, within Echvi_3758at 4483.947 kb on - strand, within Echvi_3758at 4483.947 kb on - strand, within Echvi_3758at 4483.947 kb on - strand, within Echvi_3758at 4483.948 kb on + strand, within Echvi_3758at 4483.958 kb on - strand, within Echvi_3758at 4484.162 kb on - strand, within Echvi_3758at 4484.175 kb on + strand, within Echvi_3758at 4484.273 kb on - strand, within Echvi_3758at 4484.682 kb on + strand, within Echvi_3759at 4484.683 kb on - strand, within Echvi_3759at 4484.683 kb on - strand, within Echvi_3759at 4484.687 kb on - strand, within Echvi_3759at 4484.870 kb on + strand, within Echvi_3759at 4484.923 kb on + strand, within Echvi_3759at 4484.923 kb on + strand, within Echvi_3759at 4484.923 kb on + strand, within Echvi_3759at 4484.924 kb on - strand, within Echvi_3759at 4484.967 kb on + strand, within Echvi_3759at 4485.000 kb on + strand, within Echvi_3759at 4485.096 kb on + strand, within Echvi_3759at 4485.097 kb on - strand, within Echvi_3759at 4485.147 kb on + strand, within Echvi_3759at 4485.238 kb on - strand, within Echvi_3759at 4485.290 kb on - strand, within Echvi_3759at 4485.290 kb on - strand, within Echvi_3759at 4485.296 kb on + strand, within Echvi_3759at 4485.296 kb on + strand, within Echvi_3759at 4485.300 kb on + strand, within Echvi_3759at 4485.300 kb on + strand, within Echvi_3759at 4485.338 kb on + strand, within Echvi_3759at 4485.338 kb on + strand, within Echvi_3759at 4485.338 kb on + strand, within Echvi_3759at 4485.338 kb on + strand, within Echvi_3759at 4485.356 kb on + strand, within Echvi_3759at 4485.356 kb on + strand, within Echvi_3759at 4485.412 kb on + strandat 4485.418 kb on - strandat 4485.565 kb on - strandat 4485.565 kb on - strandat 4485.609 kb on + strand, within Echvi_3760at 4485.676 kb on + strand, within Echvi_3760at 4485.676 kb on + strand, within Echvi_3760at 4485.677 kb on - strand, within Echvi_3760at 4485.683 kb on - strand, within Echvi_3760at 4485.685 kb on + strand, within Echvi_3760at 4485.685 kb on + strand, within Echvi_3760at 4485.685 kb on + strand, within Echvi_3760at 4485.686 kb on - strand, within Echvi_3760at 4485.686 kb on - strand, within Echvi_3760at 4485.686 kb on - strand, within Echvi_3760at 4485.686 kb on - strand, within Echvi_3760at 4485.686 kb on - strand, within Echvi_3760at 4485.686 kb on - strand, within Echvi_3760at 4485.686 kb on - strand, within Echvi_3760at 4485.686 kb on - strand, within Echvi_3760at 4485.688 kb on + strand, within Echvi_3760at 4485.688 kb on + strand, within Echvi_3760at 4485.688 kb on + strand, within Echvi_3760at 4485.689 kb on - strand, within Echvi_3760at 4485.689 kb on - strand, within Echvi_3760at 4485.689 kb on - strand, within Echvi_3760at 4485.689 kb on - strand, within Echvi_3760at 4485.689 kb on - strand, within Echvi_3760at 4485.691 kb on - strand, within Echvi_3760at 4485.700 kb on + strand, within Echvi_3760at 4485.740 kb on + strand, within Echvi_3760at 4485.744 kb on - strand, within Echvi_3760at 4485.875 kb on + strand, within Echvi_3760at 4485.875 kb on + strand, within Echvi_3760at 4485.875 kb on + strand, within Echvi_3760at 4485.876 kb on - strand, within Echvi_3760at 4485.943 kb on - strand, within Echvi_3760at 4485.965 kb on + strand, within Echvi_3760at 4485.965 kb on + strand, within Echvi_3760at 4486.038 kb on + strand, within Echvi_3760at 4486.039 kb on - strand, within Echvi_3760at 4486.039 kb on - strand, within Echvi_3760at 4486.039 kb on - strand, within Echvi_3760at 4486.043 kb on + strand, within Echvi_3760at 4486.044 kb on - strand, within Echvi_3760at 4486.044 kb on - strand, within Echvi_3760at 4486.049 kb on - strand, within Echvi_3760at 4486.056 kb on - strand, within Echvi_3760at 4486.067 kb on + strand, within Echvi_3760at 4486.067 kb on + strand, within Echvi_3760at 4486.068 kb on - strand, within Echvi_3760at 4486.162 kb on - strand, within Echvi_3760at 4486.169 kb on - strand, within Echvi_3760at 4486.182 kb on - strand, within Echvi_3760at 4486.193 kb on + strand, within Echvi_3760at 4486.242 kb on + strand, within Echvi_3760at 4486.286 kb on + strandat 4486.287 kb on - strandat 4486.368 kb on - strand, within Echvi_3761

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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4,483,497 + Echvi_3757 0.87 -0.7
4,483,498 - Echvi_3757 0.87 +0.1
4,483,561 - +0.6
4,483,604 + +0.4
4,483,604 + -1.0
4,483,604 + +0.2
4,483,605 - +0.1
4,483,605 - -2.2
4,483,605 - -0.1
4,483,605 - -1.5
4,483,605 - -0.6
4,483,609 + +2.0
4,483,609 + +2.2
4,483,610 - +0.1
4,483,613 + -1.5
4,483,917 + Echvi_3758 0.28 +1.5
4,483,936 + Echvi_3758 0.30 -0.0
4,483,946 + Echvi_3758 0.32 +1.3
4,483,946 + Echvi_3758 0.32 +1.0
4,483,946 + Echvi_3758 0.32 -0.8
4,483,946 + Echvi_3758 0.32 +0.4
4,483,946 + Echvi_3758 0.32 -0.7
4,483,946 + Echvi_3758 0.32 -2.2
4,483,947 - Echvi_3758 0.32 +0.5
4,483,947 - Echvi_3758 0.32 -2.5
4,483,947 - Echvi_3758 0.32 +0.5
4,483,947 - Echvi_3758 0.32 -1.3
4,483,947 - Echvi_3758 0.32 +0.3
4,483,948 + Echvi_3758 0.32 -1.5
4,483,958 - Echvi_3758 0.33 -0.7
4,484,162 - Echvi_3758 0.61 -1.6
4,484,175 + Echvi_3758 0.63 -1.8
4,484,273 - Echvi_3758 0.76 +0.4
4,484,682 + Echvi_3759 0.22 -1.2
4,484,683 - Echvi_3759 0.23 -0.5
4,484,683 - Echvi_3759 0.23 +0.1
4,484,687 - Echvi_3759 0.23 +0.7
4,484,870 + Echvi_3759 0.40 -1.5
4,484,923 + Echvi_3759 0.45 -2.6
4,484,923 + Echvi_3759 0.45 -0.6
4,484,923 + Echvi_3759 0.45 +2.0
4,484,924 - Echvi_3759 0.46 -1.4
4,484,967 + Echvi_3759 0.50 -2.1
4,485,000 + Echvi_3759 0.53 -2.1
4,485,096 + Echvi_3759 0.62 -0.6
4,485,097 - Echvi_3759 0.62 -1.1
4,485,147 + Echvi_3759 0.67 +1.7
4,485,238 - Echvi_3759 0.75 -0.2
4,485,290 - Echvi_3759 0.80 -0.0
4,485,290 - Echvi_3759 0.80 +0.2
4,485,296 + Echvi_3759 0.81 -2.5
4,485,296 + Echvi_3759 0.81 -0.0
4,485,300 + Echvi_3759 0.81 -0.5
4,485,300 + Echvi_3759 0.81 -0.5
4,485,338 + Echvi_3759 0.85 -1.9
4,485,338 + Echvi_3759 0.85 -1.7
4,485,338 + Echvi_3759 0.85 +3.1
4,485,338 + Echvi_3759 0.85 -1.2
4,485,356 + Echvi_3759 0.87 -0.6
4,485,356 + Echvi_3759 0.87 -2.7
4,485,412 + -2.7
4,485,418 - +0.2
4,485,565 - +0.3
4,485,565 - +0.2
4,485,609 + Echvi_3760 0.11 +2.0
4,485,676 + Echvi_3760 0.19 -1.8
4,485,676 + Echvi_3760 0.19 +0.6
4,485,677 - Echvi_3760 0.19 -1.0
4,485,683 - Echvi_3760 0.20 +0.0
4,485,685 + Echvi_3760 0.20 -2.7
4,485,685 + Echvi_3760 0.20 -1.0
4,485,685 + Echvi_3760 0.20 -0.1
4,485,686 - Echvi_3760 0.20 +0.7
4,485,686 - Echvi_3760 0.20 -1.1
4,485,686 - Echvi_3760 0.20 +0.9
4,485,686 - Echvi_3760 0.20 +2.0
4,485,686 - Echvi_3760 0.20 +1.8
4,485,686 - Echvi_3760 0.20 +2.1
4,485,686 - Echvi_3760 0.20 -0.2
4,485,686 - Echvi_3760 0.20 +1.9
4,485,688 + Echvi_3760 0.21 +0.4
4,485,688 + Echvi_3760 0.21 +1.1
4,485,688 + Echvi_3760 0.21 -1.6
4,485,689 - Echvi_3760 0.21 +1.3
4,485,689 - Echvi_3760 0.21 +0.5
4,485,689 - Echvi_3760 0.21 +0.1
4,485,689 - Echvi_3760 0.21 +0.4
4,485,689 - Echvi_3760 0.21 -0.1
4,485,691 - Echvi_3760 0.21 -2.3
4,485,700 + Echvi_3760 0.22 -0.6
4,485,740 + Echvi_3760 0.27 -1.2
4,485,744 - Echvi_3760 0.28 +0.1
4,485,875 + Echvi_3760 0.44 +0.3
4,485,875 + Echvi_3760 0.44 +0.4
4,485,875 + Echvi_3760 0.44 -0.5
4,485,876 - Echvi_3760 0.44 -0.1
4,485,943 - Echvi_3760 0.52 +2.0
4,485,965 + Echvi_3760 0.55 -1.2
4,485,965 + Echvi_3760 0.55 +0.2
4,486,038 + Echvi_3760 0.64 -0.0
4,486,039 - Echvi_3760 0.64 +1.1
4,486,039 - Echvi_3760 0.64 +0.5
4,486,039 - Echvi_3760 0.64 -0.7
4,486,043 + Echvi_3760 0.65 +0.1
4,486,044 - Echvi_3760 0.65 +1.0
4,486,044 - Echvi_3760 0.65 -0.3
4,486,049 - Echvi_3760 0.65 +1.3
4,486,056 - Echvi_3760 0.66 +0.9
4,486,067 + Echvi_3760 0.68 +0.9
4,486,067 + Echvi_3760 0.68 +0.3
4,486,068 - Echvi_3760 0.68 +1.6
4,486,162 - Echvi_3760 0.79 +0.6
4,486,169 - Echvi_3760 0.80 -0.9
4,486,182 - Echvi_3760 0.82 +0.5
4,486,193 + Echvi_3760 0.83 -0.0
4,486,242 + Echvi_3760 0.89 +1.4
4,486,286 + +0.1
4,486,287 - +0.3
4,486,368 - Echvi_3761 0.10 +2.0

Or see this region's nucleotide sequence