Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3749 and Echvi_3750 are separated by 412 nucleotides Echvi_3750 and Echvi_3751 are separated by 45 nucleotides
Echvi_3749: Echvi_3749 - ASPIC and UnbV., at 4,465,487 to 4,468,810
_3749
Echvi_3750: Echvi_3750 - hypothetical protein, at 4,469,223 to 4,470,497
_3750
Echvi_3751: Echvi_3751 - SusD family., at 4,470,543 to 4,472,207
_3751
Position (kb)
4469
4470
4471 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4468.281 kb on + strand, within Echvi_3749 at 4468.301 kb on - strand, within Echvi_3749 at 4468.383 kb on + strand, within Echvi_3749 at 4468.393 kb on - strand, within Echvi_3749 at 4468.393 kb on - strand, within Echvi_3749 at 4468.418 kb on - strand, within Echvi_3749 at 4468.420 kb on + strand, within Echvi_3749 at 4468.421 kb on - strand, within Echvi_3749 at 4468.424 kb on + strand, within Echvi_3749 at 4468.424 kb on + strand, within Echvi_3749 at 4468.424 kb on + strand, within Echvi_3749 at 4468.424 kb on + strand, within Echvi_3749 at 4468.478 kb on + strand at 4468.487 kb on - strand at 4468.492 kb on + strand at 4468.493 kb on - strand at 4468.518 kb on + strand at 4468.519 kb on - strand at 4468.525 kb on + strand at 4468.526 kb on - strand at 4468.538 kb on - strand at 4468.563 kb on - strand at 4468.629 kb on - strand at 4468.658 kb on - strand at 4468.832 kb on + strand at 4468.833 kb on - strand at 4468.843 kb on + strand at 4468.843 kb on + strand at 4468.887 kb on + strand at 4468.888 kb on - strand at 4468.888 kb on - strand at 4468.888 kb on - strand at 4468.888 kb on - strand at 4468.888 kb on - strand at 4468.899 kb on + strand at 4468.936 kb on - strand at 4468.940 kb on + strand at 4468.941 kb on - strand at 4468.974 kb on - strand at 4468.984 kb on + strand at 4468.987 kb on - strand at 4469.016 kb on - strand at 4469.026 kb on + strand at 4469.026 kb on + strand at 4469.040 kb on + strand at 4469.040 kb on + strand at 4469.040 kb on + strand at 4469.040 kb on + strand at 4469.041 kb on - strand at 4469.041 kb on - strand at 4469.086 kb on - strand at 4469.086 kb on - strand at 4469.137 kb on + strand at 4469.198 kb on + strand at 4469.276 kb on + strand at 4469.295 kb on - strand at 4469.313 kb on - strand at 4469.356 kb on + strand, within Echvi_3750 at 4469.356 kb on + strand, within Echvi_3750 at 4469.356 kb on + strand, within Echvi_3750 at 4469.361 kb on - strand, within Echvi_3750 at 4469.363 kb on + strand, within Echvi_3750 at 4469.363 kb on + strand, within Echvi_3750 at 4469.363 kb on + strand, within Echvi_3750 at 4469.364 kb on - strand, within Echvi_3750 at 4469.369 kb on + strand, within Echvi_3750 at 4469.370 kb on - strand, within Echvi_3750 at 4469.370 kb on - strand, within Echvi_3750 at 4469.394 kb on - strand, within Echvi_3750 at 4469.394 kb on - strand, within Echvi_3750 at 4469.420 kb on + strand, within Echvi_3750 at 4469.432 kb on + strand, within Echvi_3750 at 4469.436 kb on + strand, within Echvi_3750 at 4469.508 kb on + strand, within Echvi_3750 at 4469.508 kb on + strand, within Echvi_3750 at 4469.509 kb on - strand, within Echvi_3750 at 4469.509 kb on - strand, within Echvi_3750 at 4469.517 kb on + strand, within Echvi_3750 at 4469.517 kb on + strand, within Echvi_3750 at 4469.518 kb on - strand, within Echvi_3750 at 4469.518 kb on - strand, within Echvi_3750 at 4469.518 kb on - strand, within Echvi_3750 at 4469.518 kb on - strand, within Echvi_3750 at 4469.524 kb on - strand, within Echvi_3750 at 4469.524 kb on - strand, within Echvi_3750 at 4469.524 kb on - strand, within Echvi_3750 at 4469.553 kb on + strand, within Echvi_3750 at 4469.553 kb on + strand, within Echvi_3750 at 4469.554 kb on - strand, within Echvi_3750 at 4469.554 kb on - strand, within Echvi_3750 at 4469.554 kb on - strand, within Echvi_3750 at 4469.587 kb on + strand, within Echvi_3750 at 4469.587 kb on + strand, within Echvi_3750 at 4469.587 kb on + strand, within Echvi_3750 at 4469.587 kb on + strand, within Echvi_3750 at 4469.587 kb on + strand, within Echvi_3750 at 4469.588 kb on - strand, within Echvi_3750 at 4469.591 kb on + strand, within Echvi_3750 at 4469.705 kb on + strand, within Echvi_3750 at 4469.706 kb on - strand, within Echvi_3750 at 4469.747 kb on + strand, within Echvi_3750 at 4469.748 kb on - strand, within Echvi_3750 at 4469.979 kb on + strand, within Echvi_3750 at 4469.982 kb on - strand, within Echvi_3750 at 4470.019 kb on + strand, within Echvi_3750 at 4470.020 kb on - strand, within Echvi_3750 at 4470.159 kb on + strand, within Echvi_3750 at 4470.229 kb on + strand, within Echvi_3750 at 4470.332 kb on + strand, within Echvi_3750 at 4470.362 kb on + strand, within Echvi_3750 at 4470.363 kb on - strand, within Echvi_3750 at 4470.399 kb on + strand at 4470.399 kb on + strand at 4470.400 kb on - strand at 4470.400 kb on - strand at 4470.400 kb on - strand at 4470.400 kb on - strand at 4470.461 kb on + strand at 4470.462 kb on - strand at 4470.544 kb on + strand at 4470.557 kb on + strand at 4470.565 kb on + strand at 4470.566 kb on - strand at 4470.571 kb on - strand at 4470.655 kb on + strand at 4470.669 kb on - strand at 4470.687 kb on + strand at 4470.687 kb on + strand at 4470.724 kb on + strand, within Echvi_3751 at 4470.752 kb on + strand, within Echvi_3751 at 4470.767 kb on - strand, within Echvi_3751 at 4470.767 kb on - strand, within Echvi_3751 at 4470.784 kb on + strand, within Echvi_3751 at 4470.785 kb on - strand, within Echvi_3751 at 4470.808 kb on + strand, within Echvi_3751 at 4470.857 kb on + strand, within Echvi_3751 at 4470.914 kb on + strand, within Echvi_3751 at 4470.914 kb on + strand, within Echvi_3751 at 4470.914 kb on + strand, within Echvi_3751 at 4470.914 kb on + strand, within Echvi_3751 at 4470.915 kb on - strand, within Echvi_3751 at 4470.915 kb on - strand, within Echvi_3751 at 4470.916 kb on + strand, within Echvi_3751 at 4470.919 kb on + strand, within Echvi_3751 at 4470.919 kb on + strand, within Echvi_3751 at 4470.964 kb on + strand, within Echvi_3751 at 4470.973 kb on + strand, within Echvi_3751 at 4470.991 kb on - strand, within Echvi_3751 at 4470.993 kb on + strand, within Echvi_3751 at 4470.994 kb on - strand, within Echvi_3751 at 4470.995 kb on + strand, within Echvi_3751 at 4470.996 kb on - strand, within Echvi_3751 at 4470.996 kb on - strand, within Echvi_3751 at 4470.996 kb on - strand, within Echvi_3751 at 4470.996 kb on - strand, within Echvi_3751 at 4470.997 kb on + strand, within Echvi_3751 at 4470.997 kb on + strand at 4470.997 kb on + strand, within Echvi_3751 at 4470.997 kb on + strand, within Echvi_3751 at 4470.997 kb on + strand, within Echvi_3751 at 4470.998 kb on - strand, within Echvi_3751 at 4470.998 kb on - strand, within Echvi_3751 at 4470.998 kb on - strand, within Echvi_3751 at 4471.001 kb on + strand, within Echvi_3751 at 4471.001 kb on + strand, within Echvi_3751 at 4471.001 kb on + strand, within Echvi_3751 at 4471.001 kb on + strand, within Echvi_3751 at 4471.002 kb on - strand, within Echvi_3751 at 4471.063 kb on + strand, within Echvi_3751 at 4471.168 kb on + strand, within Echvi_3751 at 4471.175 kb on - strand, within Echvi_3751 at 4471.175 kb on - strand, within Echvi_3751 at 4471.208 kb on + strand, within Echvi_3751 at 4471.209 kb on - strand, within Echvi_3751 at 4471.266 kb on - strand, within Echvi_3751 at 4471.353 kb on + strand, within Echvi_3751 at 4471.353 kb on + strand, within Echvi_3751 at 4471.354 kb on - strand, within Echvi_3751 at 4471.369 kb on + strand, within Echvi_3751 at 4471.370 kb on - strand, within Echvi_3751 at 4471.407 kb on - strand, within Echvi_3751 at 4471.486 kb on + strand, within Echvi_3751
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 4,468,281 + Echvi_3749 0.84 -0.7 4,468,301 - Echvi_3749 0.85 +0.8 4,468,383 + Echvi_3749 0.87 -0.1 4,468,393 - Echvi_3749 0.87 +0.6 4,468,393 - Echvi_3749 0.87 -1.2 4,468,418 - Echvi_3749 0.88 -0.8 4,468,420 + Echvi_3749 0.88 +1.5 4,468,421 - Echvi_3749 0.88 -1.3 4,468,424 + Echvi_3749 0.88 +1.7 4,468,424 + Echvi_3749 0.88 +1.0 4,468,424 + Echvi_3749 0.88 +0.7 4,468,424 + Echvi_3749 0.88 +0.1 4,468,478 + +0.2 4,468,487 - +0.7 4,468,492 + -2.7 4,468,493 - -3.9 4,468,518 + +0.0 4,468,519 - +0.3 4,468,525 + -1.3 4,468,526 - -0.5 4,468,538 - -2.2 4,468,563 - +0.7 4,468,629 - +0.2 4,468,658 - -0.7 4,468,832 + -1.4 4,468,833 - -2.9 4,468,843 + -0.0 4,468,843 + +1.3 4,468,887 + -1.2 4,468,888 - +0.4 4,468,888 - -0.9 4,468,888 - -1.3 4,468,888 - -0.4 4,468,888 - +1.6 4,468,899 + +2.2 4,468,936 - -0.4 4,468,940 + +0.2 4,468,941 - +0.7 4,468,974 - +0.9 4,468,984 + +0.8 4,468,987 - -0.8 4,469,016 - +0.8 4,469,026 + -1.4 4,469,026 + +0.7 4,469,040 + +0.1 4,469,040 + -0.9 4,469,040 + -1.0 4,469,040 + +1.4 4,469,041 - -1.0 4,469,041 - -2.4 4,469,086 - -1.9 4,469,086 - -0.1 4,469,137 + -0.8 4,469,198 + -0.3 4,469,276 + -0.2 4,469,295 - -0.3 4,469,313 - +0.4 4,469,356 + Echvi_3750 0.10 +0.2 4,469,356 + Echvi_3750 0.10 -1.2 4,469,356 + Echvi_3750 0.10 +0.1 4,469,361 - Echvi_3750 0.11 +1.0 4,469,363 + Echvi_3750 0.11 +0.6 4,469,363 + Echvi_3750 0.11 +0.2 4,469,363 + Echvi_3750 0.11 -1.6 4,469,364 - Echvi_3750 0.11 -2.7 4,469,369 + Echvi_3750 0.11 -0.0 4,469,370 - Echvi_3750 0.12 -2.2 4,469,370 - Echvi_3750 0.12 -0.2 4,469,394 - Echvi_3750 0.13 -0.7 4,469,394 - Echvi_3750 0.13 -3.4 4,469,420 + Echvi_3750 0.15 -2.3 4,469,432 + Echvi_3750 0.16 -1.4 4,469,436 + Echvi_3750 0.17 +0.1 4,469,508 + Echvi_3750 0.22 -2.9 4,469,508 + Echvi_3750 0.22 -1.3 4,469,509 - Echvi_3750 0.22 +0.2 4,469,509 - Echvi_3750 0.22 -2.7 4,469,517 + Echvi_3750 0.23 -2.3 4,469,517 + Echvi_3750 0.23 -1.0 4,469,518 - Echvi_3750 0.23 +0.5 4,469,518 - Echvi_3750 0.23 +0.4 4,469,518 - Echvi_3750 0.23 +1.4 4,469,518 - Echvi_3750 0.23 +1.2 4,469,524 - Echvi_3750 0.24 -0.4 4,469,524 - Echvi_3750 0.24 -0.6 4,469,524 - Echvi_3750 0.24 -1.2 4,469,553 + Echvi_3750 0.26 -0.5 4,469,553 + Echvi_3750 0.26 -1.9 4,469,554 - Echvi_3750 0.26 -0.8 4,469,554 - Echvi_3750 0.26 -0.0 4,469,554 - Echvi_3750 0.26 -1.2 4,469,587 + Echvi_3750 0.29 -1.4 4,469,587 + Echvi_3750 0.29 -2.4 4,469,587 + Echvi_3750 0.29 -0.2 4,469,587 + Echvi_3750 0.29 -1.5 4,469,587 + Echvi_3750 0.29 -0.8 4,469,588 - Echvi_3750 0.29 -0.6 4,469,591 + Echvi_3750 0.29 +0.2 4,469,705 + Echvi_3750 0.38 +0.7 4,469,706 - Echvi_3750 0.38 +0.2 4,469,747 + Echvi_3750 0.41 -2.6 4,469,748 - Echvi_3750 0.41 +1.0 4,469,979 + Echvi_3750 0.59 -0.1 4,469,982 - Echvi_3750 0.60 -0.8 4,470,019 + Echvi_3750 0.62 -2.2 4,470,020 - Echvi_3750 0.63 +1.6 4,470,159 + Echvi_3750 0.73 +1.6 4,470,229 + Echvi_3750 0.79 -0.5 4,470,332 + Echvi_3750 0.87 +1.6 4,470,362 + Echvi_3750 0.89 -2.1 4,470,363 - Echvi_3750 0.89 -0.3 4,470,399 + +0.4 4,470,399 + -2.5 4,470,400 - -0.0 4,470,400 - +0.2 4,470,400 - -1.8 4,470,400 - +1.3 4,470,461 + -1.7 4,470,462 - +0.1 4,470,544 + +0.6 4,470,557 + +0.8 4,470,565 + +1.3 4,470,566 - -0.3 4,470,571 - -0.4 4,470,655 + +0.6 4,470,669 - -0.2 4,470,687 + +0.8 4,470,687 + +0.8 4,470,724 + Echvi_3751 0.11 -0.5 4,470,752 + Echvi_3751 0.13 -1.0 4,470,767 - Echvi_3751 0.13 -0.3 4,470,767 - Echvi_3751 0.13 +1.7 4,470,784 + Echvi_3751 0.14 -2.8 4,470,785 - Echvi_3751 0.15 +1.4 4,470,808 + Echvi_3751 0.16 +0.4 4,470,857 + Echvi_3751 0.19 -0.5 4,470,914 + Echvi_3751 0.22 -0.8 4,470,914 + Echvi_3751 0.22 +0.2 4,470,914 + Echvi_3751 0.22 -2.0 4,470,914 + Echvi_3751 0.22 -1.2 4,470,915 - Echvi_3751 0.22 -0.8 4,470,915 - Echvi_3751 0.22 -1.2 4,470,916 + Echvi_3751 0.22 +0.2 4,470,919 + Echvi_3751 0.23 +0.1 4,470,919 + Echvi_3751 0.23 -1.3 4,470,964 + Echvi_3751 0.25 +0.1 4,470,973 + Echvi_3751 0.26 +0.6 4,470,991 - Echvi_3751 0.27 +1.3 4,470,993 + Echvi_3751 0.27 +0.7 4,470,994 - Echvi_3751 0.27 -2.6 4,470,995 + Echvi_3751 0.27 +0.9 4,470,996 - Echvi_3751 0.27 -0.3 4,470,996 - Echvi_3751 0.27 -1.6 4,470,996 - Echvi_3751 0.27 -0.6 4,470,996 - Echvi_3751 0.27 -1.0 4,470,997 + Echvi_3751 0.27 +1.0 4,470,997 + +1.0 4,470,997 + Echvi_3751 0.27 -2.3 4,470,997 + Echvi_3751 0.27 -0.3 4,470,997 + Echvi_3751 0.27 +0.4 4,470,998 - Echvi_3751 0.27 -0.5 4,470,998 - Echvi_3751 0.27 +1.4 4,470,998 - Echvi_3751 0.27 -1.4 4,471,001 + Echvi_3751 0.28 -0.0 4,471,001 + Echvi_3751 0.28 -0.4 4,471,001 + Echvi_3751 0.28 +0.0 4,471,001 + Echvi_3751 0.28 -0.1 4,471,002 - Echvi_3751 0.28 +0.7 4,471,063 + Echvi_3751 0.31 +0.7 4,471,168 + Echvi_3751 0.38 +2.0 4,471,175 - Echvi_3751 0.38 -0.5 4,471,175 - Echvi_3751 0.38 -0.3 4,471,208 + Echvi_3751 0.40 -0.6 4,471,209 - Echvi_3751 0.40 +0.1 4,471,266 - Echvi_3751 0.43 -1.2 4,471,353 + Echvi_3751 0.49 +0.1 4,471,353 + Echvi_3751 0.49 +1.4 4,471,354 - Echvi_3751 0.49 -1.2 4,471,369 + Echvi_3751 0.50 +1.4 4,471,370 - Echvi_3751 0.50 -0.3 4,471,407 - Echvi_3751 0.52 -2.5 4,471,486 + Echvi_3751 0.57 +0.1
Or see this region's nucleotide sequence