Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3750

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_3749 and Echvi_3750 are separated by 412 nucleotidesEchvi_3750 and Echvi_3751 are separated by 45 nucleotides Echvi_3749: Echvi_3749 - ASPIC and UnbV., at 4,465,487 to 4,468,810 _3749 Echvi_3750: Echvi_3750 - hypothetical protein, at 4,469,223 to 4,470,497 _3750 Echvi_3751: Echvi_3751 - SusD family., at 4,470,543 to 4,472,207 _3751 Position (kb) 4469 4470 4471Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 4468.281 kb on + strand, within Echvi_3749at 4468.301 kb on - strand, within Echvi_3749at 4468.383 kb on + strand, within Echvi_3749at 4468.393 kb on - strand, within Echvi_3749at 4468.393 kb on - strand, within Echvi_3749at 4468.418 kb on - strand, within Echvi_3749at 4468.420 kb on + strand, within Echvi_3749at 4468.421 kb on - strand, within Echvi_3749at 4468.424 kb on + strand, within Echvi_3749at 4468.424 kb on + strand, within Echvi_3749at 4468.424 kb on + strand, within Echvi_3749at 4468.424 kb on + strand, within Echvi_3749at 4468.478 kb on + strandat 4468.487 kb on - strandat 4468.492 kb on + strandat 4468.493 kb on - strandat 4468.518 kb on + strandat 4468.519 kb on - strandat 4468.525 kb on + strandat 4468.526 kb on - strandat 4468.538 kb on - strandat 4468.563 kb on - strandat 4468.629 kb on - strandat 4468.658 kb on - strandat 4468.832 kb on + strandat 4468.833 kb on - strandat 4468.843 kb on + strandat 4468.843 kb on + strandat 4468.887 kb on + strandat 4468.888 kb on - strandat 4468.888 kb on - strandat 4468.888 kb on - strandat 4468.888 kb on - strandat 4468.888 kb on - strandat 4468.899 kb on + strandat 4468.936 kb on - strandat 4468.940 kb on + strandat 4468.941 kb on - strandat 4468.974 kb on - strandat 4468.984 kb on + strandat 4468.987 kb on - strandat 4469.016 kb on - strandat 4469.026 kb on + strandat 4469.026 kb on + strandat 4469.040 kb on + strandat 4469.040 kb on + strandat 4469.040 kb on + strandat 4469.040 kb on + strandat 4469.041 kb on - strandat 4469.041 kb on - strandat 4469.086 kb on - strandat 4469.086 kb on - strandat 4469.137 kb on + strandat 4469.198 kb on + strandat 4469.276 kb on + strandat 4469.295 kb on - strandat 4469.313 kb on - strandat 4469.356 kb on + strand, within Echvi_3750at 4469.356 kb on + strand, within Echvi_3750at 4469.356 kb on + strand, within Echvi_3750at 4469.361 kb on - strand, within Echvi_3750at 4469.363 kb on + strand, within Echvi_3750at 4469.363 kb on + strand, within Echvi_3750at 4469.363 kb on + strand, within Echvi_3750at 4469.364 kb on - strand, within Echvi_3750at 4469.369 kb on + strand, within Echvi_3750at 4469.370 kb on - strand, within Echvi_3750at 4469.370 kb on - strand, within Echvi_3750at 4469.394 kb on - strand, within Echvi_3750at 4469.394 kb on - strand, within Echvi_3750at 4469.420 kb on + strand, within Echvi_3750at 4469.432 kb on + strand, within Echvi_3750at 4469.436 kb on + strand, within Echvi_3750at 4469.508 kb on + strand, within Echvi_3750at 4469.508 kb on + strand, within Echvi_3750at 4469.509 kb on - strand, within Echvi_3750at 4469.509 kb on - strand, within Echvi_3750at 4469.517 kb on + strand, within Echvi_3750at 4469.517 kb on + strand, within Echvi_3750at 4469.518 kb on - strand, within Echvi_3750at 4469.518 kb on - strand, within Echvi_3750at 4469.518 kb on - strand, within Echvi_3750at 4469.518 kb on - strand, within Echvi_3750at 4469.524 kb on - strand, within Echvi_3750at 4469.524 kb on - strand, within Echvi_3750at 4469.524 kb on - strand, within Echvi_3750at 4469.553 kb on + strand, within Echvi_3750at 4469.553 kb on + strand, within Echvi_3750at 4469.554 kb on - strand, within Echvi_3750at 4469.554 kb on - strand, within Echvi_3750at 4469.554 kb on - strand, within Echvi_3750at 4469.587 kb on + strand, within Echvi_3750at 4469.587 kb on + strand, within Echvi_3750at 4469.587 kb on + strand, within Echvi_3750at 4469.587 kb on + strand, within Echvi_3750at 4469.587 kb on + strand, within Echvi_3750at 4469.588 kb on - strand, within Echvi_3750at 4469.591 kb on + strand, within Echvi_3750at 4469.705 kb on + strand, within Echvi_3750at 4469.706 kb on - strand, within Echvi_3750at 4469.747 kb on + strand, within Echvi_3750at 4469.748 kb on - strand, within Echvi_3750at 4469.979 kb on + strand, within Echvi_3750at 4469.982 kb on - strand, within Echvi_3750at 4470.019 kb on + strand, within Echvi_3750at 4470.020 kb on - strand, within Echvi_3750at 4470.159 kb on + strand, within Echvi_3750at 4470.229 kb on + strand, within Echvi_3750at 4470.332 kb on + strand, within Echvi_3750at 4470.362 kb on + strand, within Echvi_3750at 4470.363 kb on - strand, within Echvi_3750at 4470.399 kb on + strandat 4470.399 kb on + strandat 4470.400 kb on - strandat 4470.400 kb on - strandat 4470.400 kb on - strandat 4470.400 kb on - strandat 4470.461 kb on + strandat 4470.462 kb on - strandat 4470.544 kb on + strandat 4470.557 kb on + strandat 4470.565 kb on + strandat 4470.566 kb on - strandat 4470.571 kb on - strandat 4470.655 kb on + strandat 4470.669 kb on - strandat 4470.687 kb on + strandat 4470.687 kb on + strandat 4470.724 kb on + strand, within Echvi_3751at 4470.752 kb on + strand, within Echvi_3751at 4470.767 kb on - strand, within Echvi_3751at 4470.767 kb on - strand, within Echvi_3751at 4470.784 kb on + strand, within Echvi_3751at 4470.785 kb on - strand, within Echvi_3751at 4470.808 kb on + strand, within Echvi_3751at 4470.857 kb on + strand, within Echvi_3751at 4470.914 kb on + strand, within Echvi_3751at 4470.914 kb on + strand, within Echvi_3751at 4470.914 kb on + strand, within Echvi_3751at 4470.914 kb on + strand, within Echvi_3751at 4470.915 kb on - strand, within Echvi_3751at 4470.915 kb on - strand, within Echvi_3751at 4470.916 kb on + strand, within Echvi_3751at 4470.919 kb on + strand, within Echvi_3751at 4470.919 kb on + strand, within Echvi_3751at 4470.964 kb on + strand, within Echvi_3751at 4470.973 kb on + strand, within Echvi_3751at 4470.991 kb on - strand, within Echvi_3751at 4470.993 kb on + strand, within Echvi_3751at 4470.994 kb on - strand, within Echvi_3751at 4470.995 kb on + strand, within Echvi_3751at 4470.996 kb on - strand, within Echvi_3751at 4470.996 kb on - strand, within Echvi_3751at 4470.996 kb on - strand, within Echvi_3751at 4470.996 kb on - strand, within Echvi_3751at 4470.997 kb on + strand, within Echvi_3751at 4470.997 kb on + strandat 4470.997 kb on + strand, within Echvi_3751at 4470.997 kb on + strand, within Echvi_3751at 4470.997 kb on + strand, within Echvi_3751at 4470.998 kb on - strand, within Echvi_3751at 4470.998 kb on - strand, within Echvi_3751at 4470.998 kb on - strand, within Echvi_3751at 4471.001 kb on + strand, within Echvi_3751at 4471.001 kb on + strand, within Echvi_3751at 4471.001 kb on + strand, within Echvi_3751at 4471.001 kb on + strand, within Echvi_3751at 4471.002 kb on - strand, within Echvi_3751at 4471.063 kb on + strand, within Echvi_3751at 4471.168 kb on + strand, within Echvi_3751at 4471.175 kb on - strand, within Echvi_3751at 4471.175 kb on - strand, within Echvi_3751at 4471.208 kb on + strand, within Echvi_3751at 4471.209 kb on - strand, within Echvi_3751at 4471.266 kb on - strand, within Echvi_3751at 4471.353 kb on + strand, within Echvi_3751at 4471.353 kb on + strand, within Echvi_3751at 4471.354 kb on - strand, within Echvi_3751at 4471.369 kb on + strand, within Echvi_3751at 4471.370 kb on - strand, within Echvi_3751at 4471.407 kb on - strand, within Echvi_3751at 4471.486 kb on + strand, within Echvi_3751

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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4,468,281 + Echvi_3749 0.84 -0.7
4,468,301 - Echvi_3749 0.85 +0.8
4,468,383 + Echvi_3749 0.87 -0.1
4,468,393 - Echvi_3749 0.87 +0.6
4,468,393 - Echvi_3749 0.87 -1.2
4,468,418 - Echvi_3749 0.88 -0.8
4,468,420 + Echvi_3749 0.88 +1.5
4,468,421 - Echvi_3749 0.88 -1.3
4,468,424 + Echvi_3749 0.88 +1.7
4,468,424 + Echvi_3749 0.88 +1.0
4,468,424 + Echvi_3749 0.88 +0.7
4,468,424 + Echvi_3749 0.88 +0.1
4,468,478 + +0.2
4,468,487 - +0.7
4,468,492 + -2.7
4,468,493 - -3.9
4,468,518 + +0.0
4,468,519 - +0.3
4,468,525 + -1.3
4,468,526 - -0.5
4,468,538 - -2.2
4,468,563 - +0.7
4,468,629 - +0.2
4,468,658 - -0.7
4,468,832 + -1.4
4,468,833 - -2.9
4,468,843 + -0.0
4,468,843 + +1.3
4,468,887 + -1.2
4,468,888 - +0.4
4,468,888 - -0.9
4,468,888 - -1.3
4,468,888 - -0.4
4,468,888 - +1.6
4,468,899 + +2.2
4,468,936 - -0.4
4,468,940 + +0.2
4,468,941 - +0.7
4,468,974 - +0.9
4,468,984 + +0.8
4,468,987 - -0.8
4,469,016 - +0.8
4,469,026 + -1.4
4,469,026 + +0.7
4,469,040 + +0.1
4,469,040 + -0.9
4,469,040 + -1.0
4,469,040 + +1.4
4,469,041 - -1.0
4,469,041 - -2.4
4,469,086 - -1.9
4,469,086 - -0.1
4,469,137 + -0.8
4,469,198 + -0.3
4,469,276 + -0.2
4,469,295 - -0.3
4,469,313 - +0.4
4,469,356 + Echvi_3750 0.10 +0.2
4,469,356 + Echvi_3750 0.10 -1.2
4,469,356 + Echvi_3750 0.10 +0.1
4,469,361 - Echvi_3750 0.11 +1.0
4,469,363 + Echvi_3750 0.11 +0.6
4,469,363 + Echvi_3750 0.11 +0.2
4,469,363 + Echvi_3750 0.11 -1.6
4,469,364 - Echvi_3750 0.11 -2.7
4,469,369 + Echvi_3750 0.11 -0.0
4,469,370 - Echvi_3750 0.12 -2.2
4,469,370 - Echvi_3750 0.12 -0.2
4,469,394 - Echvi_3750 0.13 -0.7
4,469,394 - Echvi_3750 0.13 -3.4
4,469,420 + Echvi_3750 0.15 -2.3
4,469,432 + Echvi_3750 0.16 -1.4
4,469,436 + Echvi_3750 0.17 +0.1
4,469,508 + Echvi_3750 0.22 -2.9
4,469,508 + Echvi_3750 0.22 -1.3
4,469,509 - Echvi_3750 0.22 +0.2
4,469,509 - Echvi_3750 0.22 -2.7
4,469,517 + Echvi_3750 0.23 -2.3
4,469,517 + Echvi_3750 0.23 -1.0
4,469,518 - Echvi_3750 0.23 +0.5
4,469,518 - Echvi_3750 0.23 +0.4
4,469,518 - Echvi_3750 0.23 +1.4
4,469,518 - Echvi_3750 0.23 +1.2
4,469,524 - Echvi_3750 0.24 -0.4
4,469,524 - Echvi_3750 0.24 -0.6
4,469,524 - Echvi_3750 0.24 -1.2
4,469,553 + Echvi_3750 0.26 -0.5
4,469,553 + Echvi_3750 0.26 -1.9
4,469,554 - Echvi_3750 0.26 -0.8
4,469,554 - Echvi_3750 0.26 -0.0
4,469,554 - Echvi_3750 0.26 -1.2
4,469,587 + Echvi_3750 0.29 -1.4
4,469,587 + Echvi_3750 0.29 -2.4
4,469,587 + Echvi_3750 0.29 -0.2
4,469,587 + Echvi_3750 0.29 -1.5
4,469,587 + Echvi_3750 0.29 -0.8
4,469,588 - Echvi_3750 0.29 -0.6
4,469,591 + Echvi_3750 0.29 +0.2
4,469,705 + Echvi_3750 0.38 +0.7
4,469,706 - Echvi_3750 0.38 +0.2
4,469,747 + Echvi_3750 0.41 -2.6
4,469,748 - Echvi_3750 0.41 +1.0
4,469,979 + Echvi_3750 0.59 -0.1
4,469,982 - Echvi_3750 0.60 -0.8
4,470,019 + Echvi_3750 0.62 -2.2
4,470,020 - Echvi_3750 0.63 +1.6
4,470,159 + Echvi_3750 0.73 +1.6
4,470,229 + Echvi_3750 0.79 -0.5
4,470,332 + Echvi_3750 0.87 +1.6
4,470,362 + Echvi_3750 0.89 -2.1
4,470,363 - Echvi_3750 0.89 -0.3
4,470,399 + +0.4
4,470,399 + -2.5
4,470,400 - -0.0
4,470,400 - +0.2
4,470,400 - -1.8
4,470,400 - +1.3
4,470,461 + -1.7
4,470,462 - +0.1
4,470,544 + +0.6
4,470,557 + +0.8
4,470,565 + +1.3
4,470,566 - -0.3
4,470,571 - -0.4
4,470,655 + +0.6
4,470,669 - -0.2
4,470,687 + +0.8
4,470,687 + +0.8
4,470,724 + Echvi_3751 0.11 -0.5
4,470,752 + Echvi_3751 0.13 -1.0
4,470,767 - Echvi_3751 0.13 -0.3
4,470,767 - Echvi_3751 0.13 +1.7
4,470,784 + Echvi_3751 0.14 -2.8
4,470,785 - Echvi_3751 0.15 +1.4
4,470,808 + Echvi_3751 0.16 +0.4
4,470,857 + Echvi_3751 0.19 -0.5
4,470,914 + Echvi_3751 0.22 -0.8
4,470,914 + Echvi_3751 0.22 +0.2
4,470,914 + Echvi_3751 0.22 -2.0
4,470,914 + Echvi_3751 0.22 -1.2
4,470,915 - Echvi_3751 0.22 -0.8
4,470,915 - Echvi_3751 0.22 -1.2
4,470,916 + Echvi_3751 0.22 +0.2
4,470,919 + Echvi_3751 0.23 +0.1
4,470,919 + Echvi_3751 0.23 -1.3
4,470,964 + Echvi_3751 0.25 +0.1
4,470,973 + Echvi_3751 0.26 +0.6
4,470,991 - Echvi_3751 0.27 +1.3
4,470,993 + Echvi_3751 0.27 +0.7
4,470,994 - Echvi_3751 0.27 -2.6
4,470,995 + Echvi_3751 0.27 +0.9
4,470,996 - Echvi_3751 0.27 -0.3
4,470,996 - Echvi_3751 0.27 -1.6
4,470,996 - Echvi_3751 0.27 -0.6
4,470,996 - Echvi_3751 0.27 -1.0
4,470,997 + Echvi_3751 0.27 +1.0
4,470,997 + +1.0
4,470,997 + Echvi_3751 0.27 -2.3
4,470,997 + Echvi_3751 0.27 -0.3
4,470,997 + Echvi_3751 0.27 +0.4
4,470,998 - Echvi_3751 0.27 -0.5
4,470,998 - Echvi_3751 0.27 +1.4
4,470,998 - Echvi_3751 0.27 -1.4
4,471,001 + Echvi_3751 0.28 -0.0
4,471,001 + Echvi_3751 0.28 -0.4
4,471,001 + Echvi_3751 0.28 +0.0
4,471,001 + Echvi_3751 0.28 -0.1
4,471,002 - Echvi_3751 0.28 +0.7
4,471,063 + Echvi_3751 0.31 +0.7
4,471,168 + Echvi_3751 0.38 +2.0
4,471,175 - Echvi_3751 0.38 -0.5
4,471,175 - Echvi_3751 0.38 -0.3
4,471,208 + Echvi_3751 0.40 -0.6
4,471,209 - Echvi_3751 0.40 +0.1
4,471,266 - Echvi_3751 0.43 -1.2
4,471,353 + Echvi_3751 0.49 +0.1
4,471,353 + Echvi_3751 0.49 +1.4
4,471,354 - Echvi_3751 0.49 -1.2
4,471,369 + Echvi_3751 0.50 +1.4
4,471,370 - Echvi_3751 0.50 -0.3
4,471,407 - Echvi_3751 0.52 -2.5
4,471,486 + Echvi_3751 0.57 +0.1

Or see this region's nucleotide sequence