Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3521

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_3520 and Echvi_3521 are separated by 174 nucleotidesEchvi_3521 and Echvi_3522 are separated by 961 nucleotides Echvi_3520: Echvi_3520 - Dual-action HEIGH metallo-peptidase., at 4,168,478 to 4,169,770 _3520 Echvi_3521: Echvi_3521 - Methyltransferase domain., at 4,169,945 to 4,170,877 _3521 Echvi_3522: Echvi_3522 - Metal-dependent hydrolase, at 4,171,839 to 4,172,612 _3522 Position (kb) 4169 4170 4171Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 4168.955 kb on + strandat 4168.998 kb on - strand, within Echvi_3520at 4169.092 kb on + strand, within Echvi_3520at 4169.092 kb on + strand, within Echvi_3520at 4169.108 kb on - strand, within Echvi_3520at 4169.112 kb on - strand, within Echvi_3520at 4169.113 kb on + strand, within Echvi_3520at 4169.114 kb on - strand, within Echvi_3520at 4169.149 kb on + strand, within Echvi_3520at 4169.150 kb on - strand, within Echvi_3520at 4169.150 kb on - strand, within Echvi_3520at 4169.173 kb on + strand, within Echvi_3520at 4169.174 kb on - strand, within Echvi_3520at 4169.174 kb on - strand, within Echvi_3520at 4169.175 kb on + strand, within Echvi_3520at 4169.181 kb on - strand, within Echvi_3520at 4169.182 kb on + strand, within Echvi_3520at 4169.182 kb on + strand, within Echvi_3520at 4169.182 kb on + strand, within Echvi_3520at 4169.182 kb on + strand, within Echvi_3520at 4169.182 kb on + strand, within Echvi_3520at 4169.182 kb on + strand, within Echvi_3520at 4169.182 kb on + strand, within Echvi_3520at 4169.183 kb on - strand, within Echvi_3520at 4169.183 kb on - strand, within Echvi_3520at 4169.183 kb on - strand, within Echvi_3520at 4169.183 kb on - strand, within Echvi_3520at 4169.183 kb on - strand, within Echvi_3520at 4169.183 kb on - strand, within Echvi_3520at 4169.183 kb on - strand, within Echvi_3520at 4169.188 kb on + strand, within Echvi_3520at 4169.188 kb on + strand, within Echvi_3520at 4169.188 kb on + strand, within Echvi_3520at 4169.191 kb on + strand, within Echvi_3520at 4169.191 kb on + strand, within Echvi_3520at 4169.191 kb on + strand, within Echvi_3520at 4169.191 kb on + strand, within Echvi_3520at 4169.192 kb on - strand, within Echvi_3520at 4169.195 kb on + strand, within Echvi_3520at 4169.205 kb on + strand, within Echvi_3520at 4169.224 kb on + strand, within Echvi_3520at 4169.225 kb on - strand, within Echvi_3520at 4169.225 kb on - strand, within Echvi_3520at 4169.237 kb on + strand, within Echvi_3520at 4169.237 kb on + strand, within Echvi_3520at 4169.238 kb on - strand, within Echvi_3520at 4169.238 kb on - strand, within Echvi_3520at 4169.248 kb on + strand, within Echvi_3520at 4169.249 kb on - strand, within Echvi_3520at 4169.344 kb on + strand, within Echvi_3520at 4169.344 kb on + strand, within Echvi_3520at 4169.344 kb on + strand, within Echvi_3520at 4169.344 kb on + strand, within Echvi_3520at 4169.349 kb on - strand, within Echvi_3520at 4169.354 kb on + strand, within Echvi_3520at 4169.354 kb on + strand, within Echvi_3520at 4169.354 kb on + strand, within Echvi_3520at 4169.354 kb on + strand, within Echvi_3520at 4169.354 kb on + strand, within Echvi_3520at 4169.355 kb on - strand, within Echvi_3520at 4169.377 kb on - strand, within Echvi_3520at 4169.385 kb on - strand, within Echvi_3520at 4169.438 kb on + strand, within Echvi_3520at 4169.439 kb on - strand, within Echvi_3520at 4169.439 kb on - strand, within Echvi_3520at 4169.454 kb on - strand, within Echvi_3520at 4169.460 kb on - strand, within Echvi_3520at 4169.508 kb on + strand, within Echvi_3520at 4169.522 kb on + strand, within Echvi_3520at 4169.523 kb on - strand, within Echvi_3520at 4169.541 kb on + strand, within Echvi_3520at 4169.546 kb on + strand, within Echvi_3520at 4169.546 kb on + strand, within Echvi_3520at 4169.547 kb on - strand, within Echvi_3520at 4169.548 kb on + strand, within Echvi_3520at 4169.549 kb on - strand, within Echvi_3520at 4169.550 kb on + strand, within Echvi_3520at 4169.554 kb on + strand, within Echvi_3520at 4169.555 kb on - strand, within Echvi_3520at 4169.578 kb on - strand, within Echvi_3520at 4169.621 kb on - strand, within Echvi_3520at 4169.660 kb on + strandat 4169.661 kb on - strandat 4169.698 kb on + strandat 4169.699 kb on - strandat 4169.708 kb on + strandat 4169.714 kb on - strandat 4169.714 kb on - strandat 4169.714 kb on - strandat 4169.751 kb on - strandat 4169.774 kb on - strandat 4169.828 kb on - strandat 4169.848 kb on - strandat 4169.891 kb on + strandat 4169.894 kb on - strandat 4169.894 kb on - strandat 4169.896 kb on - strandat 4169.955 kb on + strandat 4169.996 kb on - strandat 4169.998 kb on + strandat 4169.999 kb on - strandat 4170.006 kb on + strandat 4170.006 kb on + strandat 4170.057 kb on + strand, within Echvi_3521at 4170.064 kb on + strand, within Echvi_3521at 4170.073 kb on + strand, within Echvi_3521at 4170.108 kb on + strand, within Echvi_3521at 4170.117 kb on - strand, within Echvi_3521at 4170.119 kb on + strand, within Echvi_3521at 4170.120 kb on - strand, within Echvi_3521at 4170.120 kb on - strand, within Echvi_3521at 4170.120 kb on - strand, within Echvi_3521at 4170.120 kb on - strand, within Echvi_3521at 4170.120 kb on - strand, within Echvi_3521at 4170.151 kb on - strand, within Echvi_3521at 4170.154 kb on + strand, within Echvi_3521at 4170.155 kb on - strand, within Echvi_3521at 4170.163 kb on + strand, within Echvi_3521at 4170.164 kb on - strand, within Echvi_3521at 4170.200 kb on - strand, within Echvi_3521at 4170.204 kb on - strand, within Echvi_3521at 4170.216 kb on + strand, within Echvi_3521at 4170.217 kb on - strand, within Echvi_3521at 4170.217 kb on - strand, within Echvi_3521at 4170.218 kb on + strand, within Echvi_3521at 4170.218 kb on + strand, within Echvi_3521at 4170.218 kb on + strand, within Echvi_3521at 4170.218 kb on + strand, within Echvi_3521at 4170.220 kb on + strand, within Echvi_3521at 4170.220 kb on + strand, within Echvi_3521at 4170.252 kb on + strand, within Echvi_3521at 4170.252 kb on + strand, within Echvi_3521at 4170.252 kb on + strand, within Echvi_3521at 4170.252 kb on + strand, within Echvi_3521at 4170.253 kb on - strand, within Echvi_3521at 4170.254 kb on + strand, within Echvi_3521at 4170.254 kb on + strand, within Echvi_3521at 4170.254 kb on + strand, within Echvi_3521at 4170.255 kb on - strand, within Echvi_3521at 4170.255 kb on - strand, within Echvi_3521at 4170.275 kb on + strand, within Echvi_3521at 4170.275 kb on + strand, within Echvi_3521at 4170.280 kb on + strand, within Echvi_3521at 4170.316 kb on - strand, within Echvi_3521at 4170.316 kb on - strand, within Echvi_3521at 4170.316 kb on - strand, within Echvi_3521at 4170.354 kb on - strand, within Echvi_3521at 4170.369 kb on - strand, within Echvi_3521at 4170.400 kb on - strand, within Echvi_3521at 4170.419 kb on - strand, within Echvi_3521at 4170.420 kb on + strand, within Echvi_3521at 4170.436 kb on + strand, within Echvi_3521at 4170.441 kb on - strand, within Echvi_3521at 4170.445 kb on + strand, within Echvi_3521at 4170.446 kb on - strand, within Echvi_3521at 4170.446 kb on - strand, within Echvi_3521at 4170.451 kb on + strand, within Echvi_3521at 4170.452 kb on - strand, within Echvi_3521at 4170.457 kb on + strand, within Echvi_3521at 4170.458 kb on - strand, within Echvi_3521at 4170.475 kb on + strand, within Echvi_3521at 4170.476 kb on - strand, within Echvi_3521at 4170.476 kb on - strand, within Echvi_3521at 4170.492 kb on + strand, within Echvi_3521at 4170.492 kb on + strand, within Echvi_3521at 4170.493 kb on - strand, within Echvi_3521at 4170.493 kb on - strand, within Echvi_3521at 4170.496 kb on - strand, within Echvi_3521at 4170.507 kb on + strand, within Echvi_3521at 4170.507 kb on + strand, within Echvi_3521at 4170.537 kb on + strand, within Echvi_3521at 4170.537 kb on + strand, within Echvi_3521at 4170.673 kb on + strand, within Echvi_3521at 4170.673 kb on + strand, within Echvi_3521at 4170.680 kb on + strand, within Echvi_3521at 4170.681 kb on - strand, within Echvi_3521at 4170.681 kb on - strand, within Echvi_3521at 4170.685 kb on - strand, within Echvi_3521at 4170.685 kb on - strand, within Echvi_3521at 4170.697 kb on + strand, within Echvi_3521at 4170.715 kb on + strand, within Echvi_3521at 4170.716 kb on - strand, within Echvi_3521at 4170.730 kb on - strand, within Echvi_3521at 4170.732 kb on - strand, within Echvi_3521at 4170.733 kb on + strand, within Echvi_3521at 4170.733 kb on + strand, within Echvi_3521at 4170.821 kb on + strandat 4170.876 kb on - strandat 4170.885 kb on + strandat 4170.887 kb on + strandat 4170.887 kb on + strandat 4170.888 kb on - strandat 4171.043 kb on - strandat 4171.048 kb on + strandat 4171.051 kb on + strandat 4171.052 kb on - strandat 4171.075 kb on - strandat 4171.340 kb on + strandat 4171.389 kb on + strandat 4171.396 kb on + strandat 4171.396 kb on + strandat 4171.427 kb on + strandat 4171.434 kb on + strandat 4171.434 kb on + strandat 4171.434 kb on + strandat 4171.435 kb on - strandat 4171.438 kb on + strandat 4171.439 kb on - strandat 4171.459 kb on + strandat 4171.460 kb on - strandat 4171.493 kb on + strandat 4171.494 kb on - strandat 4171.494 kb on - strandat 4171.495 kb on + strandat 4171.495 kb on + strandat 4171.496 kb on - strandat 4171.498 kb on - strandat 4171.498 kb on - strandat 4171.515 kb on + strandat 4171.518 kb on - strandat 4171.524 kb on - strandat 4171.527 kb on + strandat 4171.528 kb on - strandat 4171.540 kb on + strandat 4171.602 kb on + strandat 4171.602 kb on + strandat 4171.603 kb on - strandat 4171.626 kb on + strandat 4171.665 kb on - strandat 4171.754 kb on - strandat 4171.792 kb on - strandat 4171.835 kb on + strandat 4171.841 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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4,168,955 + -0.1
4,168,998 - Echvi_3520 0.40 -0.7
4,169,092 + Echvi_3520 0.47 +0.8
4,169,092 + Echvi_3520 0.47 +0.9
4,169,108 - Echvi_3520 0.49 -0.2
4,169,112 - Echvi_3520 0.49 +0.7
4,169,113 + Echvi_3520 0.49 +0.3
4,169,114 - Echvi_3520 0.49 -2.1
4,169,149 + Echvi_3520 0.52 -0.3
4,169,150 - Echvi_3520 0.52 +0.9
4,169,150 - Echvi_3520 0.52 +0.5
4,169,173 + Echvi_3520 0.54 -0.2
4,169,174 - Echvi_3520 0.54 +0.7
4,169,174 - Echvi_3520 0.54 +0.9
4,169,175 + Echvi_3520 0.54 -0.6
4,169,181 - Echvi_3520 0.54 -1.1
4,169,182 + Echvi_3520 0.54 -0.4
4,169,182 + Echvi_3520 0.54 +0.4
4,169,182 + Echvi_3520 0.54 -0.4
4,169,182 + Echvi_3520 0.54 +0.3
4,169,182 + Echvi_3520 0.54 -0.3
4,169,182 + Echvi_3520 0.54 -2.0
4,169,182 + Echvi_3520 0.54 -0.7
4,169,183 - Echvi_3520 0.55 -0.4
4,169,183 - Echvi_3520 0.55 -0.6
4,169,183 - Echvi_3520 0.55 +0.3
4,169,183 - Echvi_3520 0.55 +0.7
4,169,183 - Echvi_3520 0.55 +0.5
4,169,183 - Echvi_3520 0.55 -1.0
4,169,183 - Echvi_3520 0.55 -0.4
4,169,188 + Echvi_3520 0.55 +1.3
4,169,188 + Echvi_3520 0.55 -0.6
4,169,188 + Echvi_3520 0.55 +0.2
4,169,191 + Echvi_3520 0.55 -1.5
4,169,191 + Echvi_3520 0.55 -2.0
4,169,191 + Echvi_3520 0.55 -1.3
4,169,191 + Echvi_3520 0.55 -1.1
4,169,192 - Echvi_3520 0.55 +1.4
4,169,195 + Echvi_3520 0.55 +0.9
4,169,205 + Echvi_3520 0.56 +0.3
4,169,224 + Echvi_3520 0.58 +0.4
4,169,225 - Echvi_3520 0.58 +0.0
4,169,225 - Echvi_3520 0.58 +0.3
4,169,237 + Echvi_3520 0.59 +1.9
4,169,237 + Echvi_3520 0.59 -0.7
4,169,238 - Echvi_3520 0.59 +0.2
4,169,238 - Echvi_3520 0.59 +0.8
4,169,248 + Echvi_3520 0.60 -0.0
4,169,249 - Echvi_3520 0.60 -0.5
4,169,344 + Echvi_3520 0.67 +0.8
4,169,344 + Echvi_3520 0.67 -2.2
4,169,344 + Echvi_3520 0.67 -1.0
4,169,344 + Echvi_3520 0.67 -0.8
4,169,349 - Echvi_3520 0.67 -0.6
4,169,354 + Echvi_3520 0.68 +0.9
4,169,354 + Echvi_3520 0.68 -0.1
4,169,354 + Echvi_3520 0.68 -0.1
4,169,354 + Echvi_3520 0.68 +1.1
4,169,354 + Echvi_3520 0.68 -0.3
4,169,355 - Echvi_3520 0.68 -1.3
4,169,377 - Echvi_3520 0.70 +0.1
4,169,385 - Echvi_3520 0.70 +0.2
4,169,438 + Echvi_3520 0.74 -0.4
4,169,439 - Echvi_3520 0.74 -1.9
4,169,439 - Echvi_3520 0.74 -0.1
4,169,454 - Echvi_3520 0.75 -0.2
4,169,460 - Echvi_3520 0.76 -1.0
4,169,508 + Echvi_3520 0.80 -0.7
4,169,522 + Echvi_3520 0.81 -1.8
4,169,523 - Echvi_3520 0.81 +3.4
4,169,541 + Echvi_3520 0.82 -0.7
4,169,546 + Echvi_3520 0.83 +2.9
4,169,546 + Echvi_3520 0.83 -1.7
4,169,547 - Echvi_3520 0.83 -0.1
4,169,548 + Echvi_3520 0.83 -1.4
4,169,549 - Echvi_3520 0.83 +0.2
4,169,550 + Echvi_3520 0.83 +0.0
4,169,554 + Echvi_3520 0.83 +0.8
4,169,555 - Echvi_3520 0.83 -1.3
4,169,578 - Echvi_3520 0.85 -0.6
4,169,621 - Echvi_3520 0.88 -0.7
4,169,660 + -0.1
4,169,661 - +0.6
4,169,698 + -0.9
4,169,699 - +0.9
4,169,708 + -0.3
4,169,714 - -0.4
4,169,714 - -1.7
4,169,714 - +0.3
4,169,751 - +0.2
4,169,774 - +0.3
4,169,828 - -0.7
4,169,848 - +0.3
4,169,891 + -1.1
4,169,894 - -1.2
4,169,894 - +1.0
4,169,896 - -0.7
4,169,955 + -2.1
4,169,996 - -1.7
4,169,998 + +0.2
4,169,999 - -2.0
4,170,006 + +0.2
4,170,006 + -1.2
4,170,057 + Echvi_3521 0.12 -2.7
4,170,064 + Echvi_3521 0.13 -2.8
4,170,073 + Echvi_3521 0.14 +0.9
4,170,108 + Echvi_3521 0.17 -2.6
4,170,117 - Echvi_3521 0.18 +0.2
4,170,119 + Echvi_3521 0.19 -1.4
4,170,120 - Echvi_3521 0.19 +0.8
4,170,120 - Echvi_3521 0.19 -2.9
4,170,120 - Echvi_3521 0.19 -3.5
4,170,120 - Echvi_3521 0.19 -1.4
4,170,120 - Echvi_3521 0.19 -1.5
4,170,151 - Echvi_3521 0.22 -1.8
4,170,154 + Echvi_3521 0.22 -3.4
4,170,155 - Echvi_3521 0.23 -1.0
4,170,163 + Echvi_3521 0.23 -3.4
4,170,164 - Echvi_3521 0.23 -1.7
4,170,200 - Echvi_3521 0.27 -2.8
4,170,204 - Echvi_3521 0.28 -0.9
4,170,216 + Echvi_3521 0.29 -0.9
4,170,217 - Echvi_3521 0.29 -0.7
4,170,217 - Echvi_3521 0.29 -1.0
4,170,218 + Echvi_3521 0.29 +0.5
4,170,218 + Echvi_3521 0.29 -2.0
4,170,218 + Echvi_3521 0.29 -2.8
4,170,218 + Echvi_3521 0.29 -3.3
4,170,220 + Echvi_3521 0.29 +0.3
4,170,220 + Echvi_3521 0.29 -1.5
4,170,252 + Echvi_3521 0.33 -1.7
4,170,252 + Echvi_3521 0.33 -1.6
4,170,252 + Echvi_3521 0.33 +0.3
4,170,252 + Echvi_3521 0.33 -1.3
4,170,253 - Echvi_3521 0.33 -1.0
4,170,254 + Echvi_3521 0.33 +0.3
4,170,254 + Echvi_3521 0.33 -1.5
4,170,254 + Echvi_3521 0.33 -1.1
4,170,255 - Echvi_3521 0.33 -2.1
4,170,255 - Echvi_3521 0.33 -0.5
4,170,275 + Echvi_3521 0.35 -1.4
4,170,275 + Echvi_3521 0.35 -0.8
4,170,280 + Echvi_3521 0.36 -1.4
4,170,316 - Echvi_3521 0.40 -1.9
4,170,316 - Echvi_3521 0.40 -2.5
4,170,316 - Echvi_3521 0.40 -2.4
4,170,354 - Echvi_3521 0.44 -0.1
4,170,369 - Echvi_3521 0.45 +0.3
4,170,400 - Echvi_3521 0.49 -1.9
4,170,419 - Echvi_3521 0.51 -1.9
4,170,420 + Echvi_3521 0.51 +0.9
4,170,436 + Echvi_3521 0.53 +0.1
4,170,441 - Echvi_3521 0.53 -0.4
4,170,445 + Echvi_3521 0.54 -0.8
4,170,446 - Echvi_3521 0.54 -0.9
4,170,446 - Echvi_3521 0.54 -2.3
4,170,451 + Echvi_3521 0.54 +1.5
4,170,452 - Echvi_3521 0.54 -1.1
4,170,457 + Echvi_3521 0.55 -2.9
4,170,458 - Echvi_3521 0.55 -1.4
4,170,475 + Echvi_3521 0.57 -0.7
4,170,476 - Echvi_3521 0.57 -1.8
4,170,476 - Echvi_3521 0.57 -1.9
4,170,492 + Echvi_3521 0.59 -0.9
4,170,492 + Echvi_3521 0.59 -2.7
4,170,493 - Echvi_3521 0.59 -2.2
4,170,493 - Echvi_3521 0.59 -1.1
4,170,496 - Echvi_3521 0.59 -4.6
4,170,507 + Echvi_3521 0.60 -1.7
4,170,507 + Echvi_3521 0.60 -0.5
4,170,537 + Echvi_3521 0.63 -1.8
4,170,537 + Echvi_3521 0.63 +0.6
4,170,673 + Echvi_3521 0.78 -1.4
4,170,673 + Echvi_3521 0.78 -1.2
4,170,680 + Echvi_3521 0.79 -3.1
4,170,681 - Echvi_3521 0.79 -1.4
4,170,681 - Echvi_3521 0.79 -0.1
4,170,685 - Echvi_3521 0.79 +0.3
4,170,685 - Echvi_3521 0.79 -2.2
4,170,697 + Echvi_3521 0.81 -1.5
4,170,715 + Echvi_3521 0.83 -0.9
4,170,716 - Echvi_3521 0.83 -2.7
4,170,730 - Echvi_3521 0.84 -0.3
4,170,732 - Echvi_3521 0.84 +0.7
4,170,733 + Echvi_3521 0.84 -0.8
4,170,733 + Echvi_3521 0.84 -0.8
4,170,821 + -1.6
4,170,876 - -1.6
4,170,885 + -0.6
4,170,887 + +0.2
4,170,887 + -3.5
4,170,888 - +0.1
4,171,043 - +0.4
4,171,048 + +1.9
4,171,051 + +0.0
4,171,052 - +1.9
4,171,075 - -1.5
4,171,340 + +0.7
4,171,389 + +0.0
4,171,396 + -0.1
4,171,396 + -1.7
4,171,427 + +1.3
4,171,434 + +1.3
4,171,434 + -1.2
4,171,434 + -0.8
4,171,435 - -1.0
4,171,438 + -0.0
4,171,439 - -0.4
4,171,459 + -0.1
4,171,460 - +0.0
4,171,493 + -1.6
4,171,494 - -0.5
4,171,494 - -0.8
4,171,495 + -2.1
4,171,495 + +1.2
4,171,496 - +0.5
4,171,498 - -0.9
4,171,498 - +0.4
4,171,515 + +0.7
4,171,518 - -0.7
4,171,524 - +0.4
4,171,527 + -0.1
4,171,528 - -0.7
4,171,540 + +0.2
4,171,602 + -0.1
4,171,602 + -1.3
4,171,603 - +0.6
4,171,626 + -0.4
4,171,665 - +1.1
4,171,754 - +0.9
4,171,792 - -1.5
4,171,835 + -1.0
4,171,841 - +3.1

Or see this region's nucleotide sequence