Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3520 and Echvi_3521 are separated by 174 nucleotides Echvi_3521 and Echvi_3522 are separated by 961 nucleotides
Echvi_3520: Echvi_3520 - Dual-action HEIGH metallo-peptidase., at 4,168,478 to 4,169,770
_3520
Echvi_3521: Echvi_3521 - Methyltransferase domain., at 4,169,945 to 4,170,877
_3521
Echvi_3522: Echvi_3522 - Metal-dependent hydrolase, at 4,171,839 to 4,172,612
_3522
Position (kb)
4169
4170
4171 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 4168.955 kb on + strand at 4168.998 kb on - strand, within Echvi_3520 at 4169.092 kb on + strand, within Echvi_3520 at 4169.092 kb on + strand, within Echvi_3520 at 4169.108 kb on - strand, within Echvi_3520 at 4169.112 kb on - strand, within Echvi_3520 at 4169.113 kb on + strand, within Echvi_3520 at 4169.114 kb on - strand, within Echvi_3520 at 4169.149 kb on + strand, within Echvi_3520 at 4169.150 kb on - strand, within Echvi_3520 at 4169.150 kb on - strand, within Echvi_3520 at 4169.173 kb on + strand, within Echvi_3520 at 4169.174 kb on - strand, within Echvi_3520 at 4169.174 kb on - strand, within Echvi_3520 at 4169.175 kb on + strand, within Echvi_3520 at 4169.181 kb on - strand, within Echvi_3520 at 4169.182 kb on + strand, within Echvi_3520 at 4169.182 kb on + strand, within Echvi_3520 at 4169.182 kb on + strand, within Echvi_3520 at 4169.182 kb on + strand, within Echvi_3520 at 4169.182 kb on + strand, within Echvi_3520 at 4169.182 kb on + strand, within Echvi_3520 at 4169.182 kb on + strand, within Echvi_3520 at 4169.183 kb on - strand, within Echvi_3520 at 4169.183 kb on - strand, within Echvi_3520 at 4169.183 kb on - strand, within Echvi_3520 at 4169.183 kb on - strand, within Echvi_3520 at 4169.183 kb on - strand, within Echvi_3520 at 4169.183 kb on - strand, within Echvi_3520 at 4169.183 kb on - strand, within Echvi_3520 at 4169.188 kb on + strand, within Echvi_3520 at 4169.188 kb on + strand, within Echvi_3520 at 4169.188 kb on + strand, within Echvi_3520 at 4169.191 kb on + strand, within Echvi_3520 at 4169.191 kb on + strand, within Echvi_3520 at 4169.191 kb on + strand, within Echvi_3520 at 4169.191 kb on + strand, within Echvi_3520 at 4169.192 kb on - strand, within Echvi_3520 at 4169.195 kb on + strand, within Echvi_3520 at 4169.205 kb on + strand, within Echvi_3520 at 4169.224 kb on + strand, within Echvi_3520 at 4169.225 kb on - strand, within Echvi_3520 at 4169.225 kb on - strand, within Echvi_3520 at 4169.237 kb on + strand, within Echvi_3520 at 4169.237 kb on + strand, within Echvi_3520 at 4169.238 kb on - strand, within Echvi_3520 at 4169.238 kb on - strand, within Echvi_3520 at 4169.248 kb on + strand, within Echvi_3520 at 4169.249 kb on - strand, within Echvi_3520 at 4169.344 kb on + strand, within Echvi_3520 at 4169.344 kb on + strand, within Echvi_3520 at 4169.344 kb on + strand, within Echvi_3520 at 4169.344 kb on + strand, within Echvi_3520 at 4169.349 kb on - strand, within Echvi_3520 at 4169.354 kb on + strand, within Echvi_3520 at 4169.354 kb on + strand, within Echvi_3520 at 4169.354 kb on + strand, within Echvi_3520 at 4169.354 kb on + strand, within Echvi_3520 at 4169.354 kb on + strand, within Echvi_3520 at 4169.355 kb on - strand, within Echvi_3520 at 4169.377 kb on - strand, within Echvi_3520 at 4169.385 kb on - strand, within Echvi_3520 at 4169.438 kb on + strand, within Echvi_3520 at 4169.439 kb on - strand, within Echvi_3520 at 4169.439 kb on - strand, within Echvi_3520 at 4169.454 kb on - strand, within Echvi_3520 at 4169.460 kb on - strand, within Echvi_3520 at 4169.508 kb on + strand, within Echvi_3520 at 4169.522 kb on + strand, within Echvi_3520 at 4169.523 kb on - strand, within Echvi_3520 at 4169.541 kb on + strand, within Echvi_3520 at 4169.546 kb on + strand, within Echvi_3520 at 4169.546 kb on + strand, within Echvi_3520 at 4169.547 kb on - strand, within Echvi_3520 at 4169.548 kb on + strand, within Echvi_3520 at 4169.549 kb on - strand, within Echvi_3520 at 4169.550 kb on + strand, within Echvi_3520 at 4169.554 kb on + strand, within Echvi_3520 at 4169.555 kb on - strand, within Echvi_3520 at 4169.578 kb on - strand, within Echvi_3520 at 4169.621 kb on - strand, within Echvi_3520 at 4169.660 kb on + strand at 4169.661 kb on - strand at 4169.698 kb on + strand at 4169.699 kb on - strand at 4169.708 kb on + strand at 4169.714 kb on - strand at 4169.714 kb on - strand at 4169.714 kb on - strand at 4169.751 kb on - strand at 4169.774 kb on - strand at 4169.828 kb on - strand at 4169.848 kb on - strand at 4169.891 kb on + strand at 4169.894 kb on - strand at 4169.894 kb on - strand at 4169.896 kb on - strand at 4169.955 kb on + strand at 4169.996 kb on - strand at 4169.998 kb on + strand at 4169.999 kb on - strand at 4170.006 kb on + strand at 4170.006 kb on + strand at 4170.057 kb on + strand, within Echvi_3521 at 4170.064 kb on + strand, within Echvi_3521 at 4170.073 kb on + strand, within Echvi_3521 at 4170.108 kb on + strand, within Echvi_3521 at 4170.117 kb on - strand, within Echvi_3521 at 4170.119 kb on + strand, within Echvi_3521 at 4170.120 kb on - strand, within Echvi_3521 at 4170.120 kb on - strand, within Echvi_3521 at 4170.120 kb on - strand, within Echvi_3521 at 4170.120 kb on - strand, within Echvi_3521 at 4170.120 kb on - strand, within Echvi_3521 at 4170.151 kb on - strand, within Echvi_3521 at 4170.154 kb on + strand, within Echvi_3521 at 4170.155 kb on - strand, within Echvi_3521 at 4170.163 kb on + strand, within Echvi_3521 at 4170.164 kb on - strand, within Echvi_3521 at 4170.200 kb on - strand, within Echvi_3521 at 4170.204 kb on - strand, within Echvi_3521 at 4170.216 kb on + strand, within Echvi_3521 at 4170.217 kb on - strand, within Echvi_3521 at 4170.217 kb on - strand, within Echvi_3521 at 4170.218 kb on + strand, within Echvi_3521 at 4170.218 kb on + strand, within Echvi_3521 at 4170.218 kb on + strand, within Echvi_3521 at 4170.218 kb on + strand, within Echvi_3521 at 4170.220 kb on + strand, within Echvi_3521 at 4170.220 kb on + strand, within Echvi_3521 at 4170.252 kb on + strand, within Echvi_3521 at 4170.252 kb on + strand, within Echvi_3521 at 4170.252 kb on + strand, within Echvi_3521 at 4170.252 kb on + strand, within Echvi_3521 at 4170.253 kb on - strand, within Echvi_3521 at 4170.254 kb on + strand, within Echvi_3521 at 4170.254 kb on + strand, within Echvi_3521 at 4170.254 kb on + strand, within Echvi_3521 at 4170.255 kb on - strand, within Echvi_3521 at 4170.255 kb on - strand, within Echvi_3521 at 4170.275 kb on + strand, within Echvi_3521 at 4170.275 kb on + strand, within Echvi_3521 at 4170.280 kb on + strand, within Echvi_3521 at 4170.316 kb on - strand, within Echvi_3521 at 4170.316 kb on - strand, within Echvi_3521 at 4170.316 kb on - strand, within Echvi_3521 at 4170.354 kb on - strand, within Echvi_3521 at 4170.369 kb on - strand, within Echvi_3521 at 4170.400 kb on - strand, within Echvi_3521 at 4170.419 kb on - strand, within Echvi_3521 at 4170.420 kb on + strand, within Echvi_3521 at 4170.436 kb on + strand, within Echvi_3521 at 4170.441 kb on - strand, within Echvi_3521 at 4170.445 kb on + strand, within Echvi_3521 at 4170.446 kb on - strand, within Echvi_3521 at 4170.446 kb on - strand, within Echvi_3521 at 4170.451 kb on + strand, within Echvi_3521 at 4170.452 kb on - strand, within Echvi_3521 at 4170.457 kb on + strand, within Echvi_3521 at 4170.458 kb on - strand, within Echvi_3521 at 4170.475 kb on + strand, within Echvi_3521 at 4170.476 kb on - strand, within Echvi_3521 at 4170.476 kb on - strand, within Echvi_3521 at 4170.492 kb on + strand, within Echvi_3521 at 4170.492 kb on + strand, within Echvi_3521 at 4170.493 kb on - strand, within Echvi_3521 at 4170.493 kb on - strand, within Echvi_3521 at 4170.496 kb on - strand, within Echvi_3521 at 4170.507 kb on + strand, within Echvi_3521 at 4170.507 kb on + strand, within Echvi_3521 at 4170.537 kb on + strand, within Echvi_3521 at 4170.537 kb on + strand, within Echvi_3521 at 4170.673 kb on + strand, within Echvi_3521 at 4170.673 kb on + strand, within Echvi_3521 at 4170.680 kb on + strand, within Echvi_3521 at 4170.681 kb on - strand, within Echvi_3521 at 4170.681 kb on - strand, within Echvi_3521 at 4170.685 kb on - strand, within Echvi_3521 at 4170.685 kb on - strand, within Echvi_3521 at 4170.697 kb on + strand, within Echvi_3521 at 4170.715 kb on + strand, within Echvi_3521 at 4170.716 kb on - strand, within Echvi_3521 at 4170.730 kb on - strand, within Echvi_3521 at 4170.732 kb on - strand, within Echvi_3521 at 4170.733 kb on + strand, within Echvi_3521 at 4170.733 kb on + strand, within Echvi_3521 at 4170.821 kb on + strand at 4170.876 kb on - strand at 4170.885 kb on + strand at 4170.887 kb on + strand at 4170.887 kb on + strand at 4170.888 kb on - strand at 4171.043 kb on - strand at 4171.048 kb on + strand at 4171.051 kb on + strand at 4171.052 kb on - strand at 4171.075 kb on - strand at 4171.340 kb on + strand at 4171.389 kb on + strand at 4171.396 kb on + strand at 4171.396 kb on + strand at 4171.427 kb on + strand at 4171.434 kb on + strand at 4171.434 kb on + strand at 4171.434 kb on + strand at 4171.435 kb on - strand at 4171.438 kb on + strand at 4171.439 kb on - strand at 4171.459 kb on + strand at 4171.460 kb on - strand at 4171.493 kb on + strand at 4171.494 kb on - strand at 4171.494 kb on - strand at 4171.495 kb on + strand at 4171.495 kb on + strand at 4171.496 kb on - strand at 4171.498 kb on - strand at 4171.498 kb on - strand at 4171.515 kb on + strand at 4171.518 kb on - strand at 4171.524 kb on - strand at 4171.527 kb on + strand at 4171.528 kb on - strand at 4171.540 kb on + strand at 4171.602 kb on + strand at 4171.602 kb on + strand at 4171.603 kb on - strand at 4171.626 kb on + strand at 4171.665 kb on - strand at 4171.754 kb on - strand at 4171.792 kb on - strand at 4171.835 kb on + strand at 4171.841 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 4,168,955 + -0.1 4,168,998 - Echvi_3520 0.40 -0.7 4,169,092 + Echvi_3520 0.47 +0.8 4,169,092 + Echvi_3520 0.47 +0.9 4,169,108 - Echvi_3520 0.49 -0.2 4,169,112 - Echvi_3520 0.49 +0.7 4,169,113 + Echvi_3520 0.49 +0.3 4,169,114 - Echvi_3520 0.49 -2.1 4,169,149 + Echvi_3520 0.52 -0.3 4,169,150 - Echvi_3520 0.52 +0.9 4,169,150 - Echvi_3520 0.52 +0.5 4,169,173 + Echvi_3520 0.54 -0.2 4,169,174 - Echvi_3520 0.54 +0.7 4,169,174 - Echvi_3520 0.54 +0.9 4,169,175 + Echvi_3520 0.54 -0.6 4,169,181 - Echvi_3520 0.54 -1.1 4,169,182 + Echvi_3520 0.54 -0.4 4,169,182 + Echvi_3520 0.54 +0.4 4,169,182 + Echvi_3520 0.54 -0.4 4,169,182 + Echvi_3520 0.54 +0.3 4,169,182 + Echvi_3520 0.54 -0.3 4,169,182 + Echvi_3520 0.54 -2.0 4,169,182 + Echvi_3520 0.54 -0.7 4,169,183 - Echvi_3520 0.55 -0.4 4,169,183 - Echvi_3520 0.55 -0.6 4,169,183 - Echvi_3520 0.55 +0.3 4,169,183 - Echvi_3520 0.55 +0.7 4,169,183 - Echvi_3520 0.55 +0.5 4,169,183 - Echvi_3520 0.55 -1.0 4,169,183 - Echvi_3520 0.55 -0.4 4,169,188 + Echvi_3520 0.55 +1.3 4,169,188 + Echvi_3520 0.55 -0.6 4,169,188 + Echvi_3520 0.55 +0.2 4,169,191 + Echvi_3520 0.55 -1.5 4,169,191 + Echvi_3520 0.55 -2.0 4,169,191 + Echvi_3520 0.55 -1.3 4,169,191 + Echvi_3520 0.55 -1.1 4,169,192 - Echvi_3520 0.55 +1.4 4,169,195 + Echvi_3520 0.55 +0.9 4,169,205 + Echvi_3520 0.56 +0.3 4,169,224 + Echvi_3520 0.58 +0.4 4,169,225 - Echvi_3520 0.58 +0.0 4,169,225 - Echvi_3520 0.58 +0.3 4,169,237 + Echvi_3520 0.59 +1.9 4,169,237 + Echvi_3520 0.59 -0.7 4,169,238 - Echvi_3520 0.59 +0.2 4,169,238 - Echvi_3520 0.59 +0.8 4,169,248 + Echvi_3520 0.60 -0.0 4,169,249 - Echvi_3520 0.60 -0.5 4,169,344 + Echvi_3520 0.67 +0.8 4,169,344 + Echvi_3520 0.67 -2.2 4,169,344 + Echvi_3520 0.67 -1.0 4,169,344 + Echvi_3520 0.67 -0.8 4,169,349 - Echvi_3520 0.67 -0.6 4,169,354 + Echvi_3520 0.68 +0.9 4,169,354 + Echvi_3520 0.68 -0.1 4,169,354 + Echvi_3520 0.68 -0.1 4,169,354 + Echvi_3520 0.68 +1.1 4,169,354 + Echvi_3520 0.68 -0.3 4,169,355 - Echvi_3520 0.68 -1.3 4,169,377 - Echvi_3520 0.70 +0.1 4,169,385 - Echvi_3520 0.70 +0.2 4,169,438 + Echvi_3520 0.74 -0.4 4,169,439 - Echvi_3520 0.74 -1.9 4,169,439 - Echvi_3520 0.74 -0.1 4,169,454 - Echvi_3520 0.75 -0.2 4,169,460 - Echvi_3520 0.76 -1.0 4,169,508 + Echvi_3520 0.80 -0.7 4,169,522 + Echvi_3520 0.81 -1.8 4,169,523 - Echvi_3520 0.81 +3.4 4,169,541 + Echvi_3520 0.82 -0.7 4,169,546 + Echvi_3520 0.83 +2.9 4,169,546 + Echvi_3520 0.83 -1.7 4,169,547 - Echvi_3520 0.83 -0.1 4,169,548 + Echvi_3520 0.83 -1.4 4,169,549 - Echvi_3520 0.83 +0.2 4,169,550 + Echvi_3520 0.83 +0.0 4,169,554 + Echvi_3520 0.83 +0.8 4,169,555 - Echvi_3520 0.83 -1.3 4,169,578 - Echvi_3520 0.85 -0.6 4,169,621 - Echvi_3520 0.88 -0.7 4,169,660 + -0.1 4,169,661 - +0.6 4,169,698 + -0.9 4,169,699 - +0.9 4,169,708 + -0.3 4,169,714 - -0.4 4,169,714 - -1.7 4,169,714 - +0.3 4,169,751 - +0.2 4,169,774 - +0.3 4,169,828 - -0.7 4,169,848 - +0.3 4,169,891 + -1.1 4,169,894 - -1.2 4,169,894 - +1.0 4,169,896 - -0.7 4,169,955 + -2.1 4,169,996 - -1.7 4,169,998 + +0.2 4,169,999 - -2.0 4,170,006 + +0.2 4,170,006 + -1.2 4,170,057 + Echvi_3521 0.12 -2.7 4,170,064 + Echvi_3521 0.13 -2.8 4,170,073 + Echvi_3521 0.14 +0.9 4,170,108 + Echvi_3521 0.17 -2.6 4,170,117 - Echvi_3521 0.18 +0.2 4,170,119 + Echvi_3521 0.19 -1.4 4,170,120 - Echvi_3521 0.19 +0.8 4,170,120 - Echvi_3521 0.19 -2.9 4,170,120 - Echvi_3521 0.19 -3.5 4,170,120 - Echvi_3521 0.19 -1.4 4,170,120 - Echvi_3521 0.19 -1.5 4,170,151 - Echvi_3521 0.22 -1.8 4,170,154 + Echvi_3521 0.22 -3.4 4,170,155 - Echvi_3521 0.23 -1.0 4,170,163 + Echvi_3521 0.23 -3.4 4,170,164 - Echvi_3521 0.23 -1.7 4,170,200 - Echvi_3521 0.27 -2.8 4,170,204 - Echvi_3521 0.28 -0.9 4,170,216 + Echvi_3521 0.29 -0.9 4,170,217 - Echvi_3521 0.29 -0.7 4,170,217 - Echvi_3521 0.29 -1.0 4,170,218 + Echvi_3521 0.29 +0.5 4,170,218 + Echvi_3521 0.29 -2.0 4,170,218 + Echvi_3521 0.29 -2.8 4,170,218 + Echvi_3521 0.29 -3.3 4,170,220 + Echvi_3521 0.29 +0.3 4,170,220 + Echvi_3521 0.29 -1.5 4,170,252 + Echvi_3521 0.33 -1.7 4,170,252 + Echvi_3521 0.33 -1.6 4,170,252 + Echvi_3521 0.33 +0.3 4,170,252 + Echvi_3521 0.33 -1.3 4,170,253 - Echvi_3521 0.33 -1.0 4,170,254 + Echvi_3521 0.33 +0.3 4,170,254 + Echvi_3521 0.33 -1.5 4,170,254 + Echvi_3521 0.33 -1.1 4,170,255 - Echvi_3521 0.33 -2.1 4,170,255 - Echvi_3521 0.33 -0.5 4,170,275 + Echvi_3521 0.35 -1.4 4,170,275 + Echvi_3521 0.35 -0.8 4,170,280 + Echvi_3521 0.36 -1.4 4,170,316 - Echvi_3521 0.40 -1.9 4,170,316 - Echvi_3521 0.40 -2.5 4,170,316 - Echvi_3521 0.40 -2.4 4,170,354 - Echvi_3521 0.44 -0.1 4,170,369 - Echvi_3521 0.45 +0.3 4,170,400 - Echvi_3521 0.49 -1.9 4,170,419 - Echvi_3521 0.51 -1.9 4,170,420 + Echvi_3521 0.51 +0.9 4,170,436 + Echvi_3521 0.53 +0.1 4,170,441 - Echvi_3521 0.53 -0.4 4,170,445 + Echvi_3521 0.54 -0.8 4,170,446 - Echvi_3521 0.54 -0.9 4,170,446 - Echvi_3521 0.54 -2.3 4,170,451 + Echvi_3521 0.54 +1.5 4,170,452 - Echvi_3521 0.54 -1.1 4,170,457 + Echvi_3521 0.55 -2.9 4,170,458 - Echvi_3521 0.55 -1.4 4,170,475 + Echvi_3521 0.57 -0.7 4,170,476 - Echvi_3521 0.57 -1.8 4,170,476 - Echvi_3521 0.57 -1.9 4,170,492 + Echvi_3521 0.59 -0.9 4,170,492 + Echvi_3521 0.59 -2.7 4,170,493 - Echvi_3521 0.59 -2.2 4,170,493 - Echvi_3521 0.59 -1.1 4,170,496 - Echvi_3521 0.59 -4.6 4,170,507 + Echvi_3521 0.60 -1.7 4,170,507 + Echvi_3521 0.60 -0.5 4,170,537 + Echvi_3521 0.63 -1.8 4,170,537 + Echvi_3521 0.63 +0.6 4,170,673 + Echvi_3521 0.78 -1.4 4,170,673 + Echvi_3521 0.78 -1.2 4,170,680 + Echvi_3521 0.79 -3.1 4,170,681 - Echvi_3521 0.79 -1.4 4,170,681 - Echvi_3521 0.79 -0.1 4,170,685 - Echvi_3521 0.79 +0.3 4,170,685 - Echvi_3521 0.79 -2.2 4,170,697 + Echvi_3521 0.81 -1.5 4,170,715 + Echvi_3521 0.83 -0.9 4,170,716 - Echvi_3521 0.83 -2.7 4,170,730 - Echvi_3521 0.84 -0.3 4,170,732 - Echvi_3521 0.84 +0.7 4,170,733 + Echvi_3521 0.84 -0.8 4,170,733 + Echvi_3521 0.84 -0.8 4,170,821 + -1.6 4,170,876 - -1.6 4,170,885 + -0.6 4,170,887 + +0.2 4,170,887 + -3.5 4,170,888 - +0.1 4,171,043 - +0.4 4,171,048 + +1.9 4,171,051 + +0.0 4,171,052 - +1.9 4,171,075 - -1.5 4,171,340 + +0.7 4,171,389 + +0.0 4,171,396 + -0.1 4,171,396 + -1.7 4,171,427 + +1.3 4,171,434 + +1.3 4,171,434 + -1.2 4,171,434 + -0.8 4,171,435 - -1.0 4,171,438 + -0.0 4,171,439 - -0.4 4,171,459 + -0.1 4,171,460 - +0.0 4,171,493 + -1.6 4,171,494 - -0.5 4,171,494 - -0.8 4,171,495 + -2.1 4,171,495 + +1.2 4,171,496 - +0.5 4,171,498 - -0.9 4,171,498 - +0.4 4,171,515 + +0.7 4,171,518 - -0.7 4,171,524 - +0.4 4,171,527 + -0.1 4,171,528 - -0.7 4,171,540 + +0.2 4,171,602 + -0.1 4,171,602 + -1.3 4,171,603 - +0.6 4,171,626 + -0.4 4,171,665 - +1.1 4,171,754 - +0.9 4,171,792 - -1.5 4,171,835 + -1.0 4,171,841 - +3.1
Or see this region's nucleotide sequence