Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2763 and Echvi_2764 are separated by 17 nucleotides Echvi_2764 and Echvi_2765 are separated by 226 nucleotides
Echvi_2763: Echvi_2763 - SusD family., at 3,296,104 to 3,297,969
_2763
Echvi_2764: Echvi_2764 - hypothetical protein, at 3,297,987 to 3,298,691
_2764
Echvi_2765: Echvi_2765 - Beta-xylosidase, at 3,298,918 to 3,299,982
_2765
Position (kb)
3297
3298
3299 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3297.043 kb on - strand, within Echvi_2763 at 3297.043 kb on - strand, within Echvi_2763 at 3297.054 kb on + strand, within Echvi_2763 at 3297.054 kb on + strand, within Echvi_2763 at 3297.055 kb on - strand, within Echvi_2763 at 3297.055 kb on - strand, within Echvi_2763 at 3297.071 kb on + strand, within Echvi_2763 at 3297.101 kb on - strand, within Echvi_2763 at 3297.117 kb on + strand, within Echvi_2763 at 3297.167 kb on - strand, within Echvi_2763 at 3297.167 kb on - strand, within Echvi_2763 at 3297.261 kb on + strand, within Echvi_2763 at 3297.357 kb on - strand, within Echvi_2763 at 3297.357 kb on - strand, within Echvi_2763 at 3297.378 kb on - strand, within Echvi_2763 at 3297.381 kb on + strand, within Echvi_2763 at 3297.413 kb on - strand, within Echvi_2763 at 3297.543 kb on + strand, within Echvi_2763 at 3297.549 kb on + strand, within Echvi_2763 at 3297.550 kb on - strand, within Echvi_2763 at 3297.550 kb on - strand, within Echvi_2763 at 3297.562 kb on + strand, within Echvi_2763 at 3297.563 kb on - strand, within Echvi_2763 at 3297.563 kb on - strand, within Echvi_2763 at 3297.621 kb on + strand, within Echvi_2763 at 3297.637 kb on - strand, within Echvi_2763 at 3297.802 kb on - strand at 3297.869 kb on + strand at 3297.874 kb on - strand at 3297.901 kb on + strand at 3297.901 kb on + strand at 3297.901 kb on + strand at 3297.902 kb on - strand at 3297.902 kb on - strand at 3297.902 kb on - strand at 3297.902 kb on - strand at 3297.904 kb on + strand at 3297.927 kb on - strand at 3297.927 kb on - strand at 3297.942 kb on + strand at 3297.974 kb on - strand at 3298.054 kb on - strand at 3298.059 kb on - strand, within Echvi_2764 at 3298.062 kb on + strand, within Echvi_2764 at 3298.062 kb on + strand, within Echvi_2764 at 3298.063 kb on - strand, within Echvi_2764 at 3298.094 kb on + strand, within Echvi_2764 at 3298.102 kb on - strand, within Echvi_2764 at 3298.102 kb on - strand, within Echvi_2764 at 3298.124 kb on - strand, within Echvi_2764 at 3298.128 kb on + strand, within Echvi_2764 at 3298.129 kb on - strand, within Echvi_2764 at 3298.130 kb on + strand, within Echvi_2764 at 3298.130 kb on + strand, within Echvi_2764 at 3298.131 kb on - strand, within Echvi_2764 at 3298.131 kb on - strand, within Echvi_2764 at 3298.140 kb on + strand, within Echvi_2764 at 3298.140 kb on + strand, within Echvi_2764 at 3298.275 kb on - strand, within Echvi_2764 at 3298.362 kb on + strand, within Echvi_2764 at 3298.362 kb on + strand, within Echvi_2764 at 3298.363 kb on - strand, within Echvi_2764 at 3298.363 kb on - strand, within Echvi_2764 at 3298.365 kb on + strand, within Echvi_2764 at 3298.366 kb on - strand, within Echvi_2764 at 3298.366 kb on - strand, within Echvi_2764 at 3298.366 kb on - strand, within Echvi_2764 at 3298.366 kb on - strand, within Echvi_2764 at 3298.367 kb on + strand, within Echvi_2764 at 3298.367 kb on + strand, within Echvi_2764 at 3298.367 kb on + strand, within Echvi_2764 at 3298.367 kb on + strand, within Echvi_2764 at 3298.367 kb on + strand, within Echvi_2764 at 3298.368 kb on - strand, within Echvi_2764 at 3298.368 kb on - strand, within Echvi_2764 at 3298.368 kb on - strand, within Echvi_2764 at 3298.368 kb on - strand, within Echvi_2764 at 3298.382 kb on - strand, within Echvi_2764 at 3298.385 kb on + strand, within Echvi_2764 at 3298.400 kb on + strand, within Echvi_2764 at 3298.471 kb on + strand, within Echvi_2764 at 3298.472 kb on - strand, within Echvi_2764 at 3298.480 kb on - strand, within Echvi_2764 at 3298.511 kb on + strand, within Echvi_2764 at 3298.547 kb on + strand, within Echvi_2764 at 3298.548 kb on - strand, within Echvi_2764 at 3298.548 kb on - strand, within Echvi_2764 at 3298.565 kb on + strand, within Echvi_2764 at 3298.611 kb on + strand, within Echvi_2764 at 3298.612 kb on - strand, within Echvi_2764 at 3298.612 kb on - strand, within Echvi_2764 at 3298.612 kb on - strand, within Echvi_2764 at 3298.703 kb on - strand at 3298.722 kb on + strand at 3298.794 kb on + strand at 3298.836 kb on + strand at 3298.837 kb on - strand at 3298.844 kb on - strand at 3298.890 kb on - strand at 3298.890 kb on - strand at 3298.892 kb on - strand at 3298.892 kb on - strand at 3298.892 kb on - strand at 3298.931 kb on + strand at 3298.931 kb on + strand at 3298.934 kb on + strand at 3298.935 kb on - strand at 3298.948 kb on + strand at 3298.953 kb on - strand at 3298.965 kb on + strand at 3298.965 kb on + strand at 3298.965 kb on + strand at 3298.970 kb on + strand at 3298.971 kb on - strand at 3299.033 kb on + strand, within Echvi_2765 at 3299.033 kb on + strand, within Echvi_2765 at 3299.034 kb on - strand, within Echvi_2765 at 3299.044 kb on + strand, within Echvi_2765 at 3299.045 kb on - strand, within Echvi_2765 at 3299.049 kb on + strand, within Echvi_2765 at 3299.049 kb on + strand, within Echvi_2765 at 3299.050 kb on - strand, within Echvi_2765 at 3299.111 kb on - strand, within Echvi_2765 at 3299.186 kb on + strand, within Echvi_2765 at 3299.277 kb on - strand, within Echvi_2765 at 3299.277 kb on - strand, within Echvi_2765 at 3299.292 kb on + strand, within Echvi_2765 at 3299.293 kb on - strand, within Echvi_2765 at 3299.293 kb on - strand, within Echvi_2765 at 3299.296 kb on + strand, within Echvi_2765 at 3299.297 kb on - strand, within Echvi_2765 at 3299.297 kb on - strand, within Echvi_2765 at 3299.297 kb on - strand, within Echvi_2765 at 3299.297 kb on - strand, within Echvi_2765 at 3299.297 kb on - strand, within Echvi_2765 at 3299.380 kb on + strand, within Echvi_2765 at 3299.414 kb on + strand, within Echvi_2765 at 3299.415 kb on - strand, within Echvi_2765 at 3299.437 kb on + strand, within Echvi_2765 at 3299.489 kb on + strand, within Echvi_2765 at 3299.490 kb on - strand, within Echvi_2765 at 3299.490 kb on - strand, within Echvi_2765 at 3299.490 kb on - strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.491 kb on + strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.492 kb on - strand, within Echvi_2765 at 3299.572 kb on + strand, within Echvi_2765 at 3299.572 kb on + strand, within Echvi_2765 at 3299.573 kb on - strand, within Echvi_2765 at 3299.573 kb on - strand, within Echvi_2765 at 3299.573 kb on - strand, within Echvi_2765 at 3299.573 kb on - strand, within Echvi_2765 at 3299.573 kb on - strand, within Echvi_2765 at 3299.575 kb on - strand, within Echvi_2765 at 3299.581 kb on - strand, within Echvi_2765 at 3299.593 kb on + strand, within Echvi_2765
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 3,297,043 - Echvi_2763 0.50 +0.5 3,297,043 - Echvi_2763 0.50 +0.3 3,297,054 + Echvi_2763 0.51 -0.3 3,297,054 + Echvi_2763 0.51 +0.5 3,297,055 - Echvi_2763 0.51 -0.2 3,297,055 - Echvi_2763 0.51 -0.2 3,297,071 + Echvi_2763 0.52 +3.2 3,297,101 - Echvi_2763 0.53 +0.1 3,297,117 + Echvi_2763 0.54 -1.5 3,297,167 - Echvi_2763 0.57 -1.5 3,297,167 - Echvi_2763 0.57 -1.8 3,297,261 + Echvi_2763 0.62 -1.0 3,297,357 - Echvi_2763 0.67 +0.3 3,297,357 - Echvi_2763 0.67 -1.3 3,297,378 - Echvi_2763 0.68 -0.3 3,297,381 + Echvi_2763 0.68 +1.0 3,297,413 - Echvi_2763 0.70 -0.2 3,297,543 + Echvi_2763 0.77 +0.7 3,297,549 + Echvi_2763 0.77 -2.2 3,297,550 - Echvi_2763 0.77 +1.4 3,297,550 - Echvi_2763 0.77 +0.3 3,297,562 + Echvi_2763 0.78 -1.3 3,297,563 - Echvi_2763 0.78 +0.5 3,297,563 - Echvi_2763 0.78 +0.2 3,297,621 + Echvi_2763 0.81 -2.7 3,297,637 - Echvi_2763 0.82 -0.2 3,297,802 - -0.3 3,297,869 + +1.6 3,297,874 - -0.8 3,297,901 + -1.2 3,297,901 + -2.8 3,297,901 + -0.8 3,297,902 - -3.1 3,297,902 - +0.7 3,297,902 - -1.7 3,297,902 - +1.2 3,297,904 + -0.1 3,297,927 - -1.7 3,297,927 - -0.4 3,297,942 + +0.3 3,297,974 - +2.6 3,298,054 - +0.2 3,298,059 - Echvi_2764 0.10 +0.9 3,298,062 + Echvi_2764 0.11 +0.6 3,298,062 + Echvi_2764 0.11 -2.6 3,298,063 - Echvi_2764 0.11 -0.3 3,298,094 + Echvi_2764 0.15 +0.9 3,298,102 - Echvi_2764 0.16 +0.4 3,298,102 - Echvi_2764 0.16 +0.1 3,298,124 - Echvi_2764 0.19 +0.0 3,298,128 + Echvi_2764 0.20 +0.2 3,298,129 - Echvi_2764 0.20 -1.1 3,298,130 + Echvi_2764 0.20 -1.9 3,298,130 + Echvi_2764 0.20 +0.2 3,298,131 - Echvi_2764 0.20 -1.1 3,298,131 - Echvi_2764 0.20 +0.2 3,298,140 + Echvi_2764 0.22 +1.0 3,298,140 + Echvi_2764 0.22 -0.1 3,298,275 - Echvi_2764 0.41 +0.3 3,298,362 + Echvi_2764 0.53 -0.5 3,298,362 + Echvi_2764 0.53 -1.7 3,298,363 - Echvi_2764 0.53 -2.2 3,298,363 - Echvi_2764 0.53 -1.2 3,298,365 + Echvi_2764 0.54 -1.3 3,298,366 - Echvi_2764 0.54 +1.5 3,298,366 - Echvi_2764 0.54 -0.6 3,298,366 - Echvi_2764 0.54 -1.1 3,298,366 - Echvi_2764 0.54 +0.9 3,298,367 + Echvi_2764 0.54 +0.4 3,298,367 + Echvi_2764 0.54 +0.4 3,298,367 + Echvi_2764 0.54 -0.3 3,298,367 + Echvi_2764 0.54 -0.2 3,298,367 + Echvi_2764 0.54 +0.3 3,298,368 - Echvi_2764 0.54 -1.8 3,298,368 - Echvi_2764 0.54 -0.2 3,298,368 - Echvi_2764 0.54 +0.1 3,298,368 - Echvi_2764 0.54 +1.5 3,298,382 - Echvi_2764 0.56 +1.2 3,298,385 + Echvi_2764 0.56 -1.5 3,298,400 + Echvi_2764 0.59 -1.0 3,298,471 + Echvi_2764 0.69 -1.7 3,298,472 - Echvi_2764 0.69 -1.5 3,298,480 - Echvi_2764 0.70 +1.3 3,298,511 + Echvi_2764 0.74 +0.0 3,298,547 + Echvi_2764 0.79 -1.5 3,298,548 - Echvi_2764 0.80 -0.3 3,298,548 - Echvi_2764 0.80 -0.3 3,298,565 + Echvi_2764 0.82 -0.8 3,298,611 + Echvi_2764 0.89 -1.3 3,298,612 - Echvi_2764 0.89 +0.5 3,298,612 - Echvi_2764 0.89 -0.0 3,298,612 - Echvi_2764 0.89 -1.8 3,298,703 - -0.4 3,298,722 + +0.7 3,298,794 + -0.2 3,298,836 + -0.5 3,298,837 - -1.6 3,298,844 - -1.6 3,298,890 - -1.8 3,298,890 - -1.7 3,298,892 - +1.2 3,298,892 - -1.0 3,298,892 - -1.7 3,298,931 + -0.1 3,298,931 + -1.7 3,298,934 + -1.0 3,298,935 - -0.6 3,298,948 + -0.2 3,298,953 - +0.4 3,298,965 + -0.6 3,298,965 + +0.2 3,298,965 + +0.2 3,298,970 + +0.5 3,298,971 - -2.3 3,299,033 + Echvi_2765 0.11 -2.3 3,299,033 + Echvi_2765 0.11 +1.3 3,299,034 - Echvi_2765 0.11 +0.1 3,299,044 + Echvi_2765 0.12 +0.9 3,299,045 - Echvi_2765 0.12 +0.0 3,299,049 + Echvi_2765 0.12 +0.2 3,299,049 + Echvi_2765 0.12 +0.1 3,299,050 - Echvi_2765 0.12 +0.2 3,299,111 - Echvi_2765 0.18 -1.7 3,299,186 + Echvi_2765 0.25 -0.3 3,299,277 - Echvi_2765 0.34 +0.4 3,299,277 - Echvi_2765 0.34 -1.8 3,299,292 + Echvi_2765 0.35 -1.9 3,299,293 - Echvi_2765 0.35 +0.4 3,299,293 - Echvi_2765 0.35 +1.1 3,299,296 + Echvi_2765 0.35 -0.6 3,299,297 - Echvi_2765 0.36 -1.0 3,299,297 - Echvi_2765 0.36 +0.4 3,299,297 - Echvi_2765 0.36 -0.2 3,299,297 - Echvi_2765 0.36 +2.0 3,299,297 - Echvi_2765 0.36 -0.7 3,299,380 + Echvi_2765 0.43 +2.0 3,299,414 + Echvi_2765 0.47 +0.1 3,299,415 - Echvi_2765 0.47 +1.2 3,299,437 + Echvi_2765 0.49 -0.0 3,299,489 + Echvi_2765 0.54 +0.4 3,299,490 - Echvi_2765 0.54 +0.3 3,299,490 - Echvi_2765 0.54 -2.1 3,299,490 - Echvi_2765 0.54 +0.3 3,299,491 + Echvi_2765 0.54 -3.5 3,299,491 + Echvi_2765 0.54 +0.4 3,299,491 + Echvi_2765 0.54 +2.0 3,299,491 + Echvi_2765 0.54 -0.0 3,299,491 + Echvi_2765 0.54 +0.3 3,299,491 + Echvi_2765 0.54 -0.3 3,299,491 + Echvi_2765 0.54 +1.3 3,299,491 + Echvi_2765 0.54 -1.0 3,299,491 + Echvi_2765 0.54 -0.9 3,299,491 + Echvi_2765 0.54 -0.3 3,299,491 + Echvi_2765 0.54 +0.4 3,299,491 + Echvi_2765 0.54 +0.4 3,299,491 + Echvi_2765 0.54 -0.1 3,299,492 - Echvi_2765 0.54 -0.9 3,299,492 - Echvi_2765 0.54 +0.5 3,299,492 - Echvi_2765 0.54 -0.5 3,299,492 - Echvi_2765 0.54 +0.8 3,299,492 - Echvi_2765 0.54 -0.5 3,299,492 - Echvi_2765 0.54 +0.8 3,299,492 - Echvi_2765 0.54 -0.1 3,299,492 - Echvi_2765 0.54 +0.0 3,299,492 - Echvi_2765 0.54 -0.3 3,299,572 + Echvi_2765 0.61 +1.3 3,299,572 + Echvi_2765 0.61 -1.5 3,299,573 - Echvi_2765 0.62 -0.6 3,299,573 - Echvi_2765 0.62 -0.3 3,299,573 - Echvi_2765 0.62 +0.6 3,299,573 - Echvi_2765 0.62 -1.8 3,299,573 - Echvi_2765 0.62 -0.0 3,299,575 - Echvi_2765 0.62 +0.4 3,299,581 - Echvi_2765 0.62 -0.3 3,299,593 + Echvi_2765 0.63 +0.8
Or see this region's nucleotide sequence