Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2764

Experiment: L-Phenylalanine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntEchvi_2763 and Echvi_2764 are separated by 17 nucleotidesEchvi_2764 and Echvi_2765 are separated by 226 nucleotides Echvi_2763: Echvi_2763 - SusD family., at 3,296,104 to 3,297,969 _2763 Echvi_2764: Echvi_2764 - hypothetical protein, at 3,297,987 to 3,298,691 _2764 Echvi_2765: Echvi_2765 - Beta-xylosidase, at 3,298,918 to 3,299,982 _2765 Position (kb) 3297 3298 3299Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3297.043 kb on - strand, within Echvi_2763at 3297.043 kb on - strand, within Echvi_2763at 3297.054 kb on + strand, within Echvi_2763at 3297.054 kb on + strand, within Echvi_2763at 3297.055 kb on - strand, within Echvi_2763at 3297.055 kb on - strand, within Echvi_2763at 3297.071 kb on + strand, within Echvi_2763at 3297.101 kb on - strand, within Echvi_2763at 3297.117 kb on + strand, within Echvi_2763at 3297.167 kb on - strand, within Echvi_2763at 3297.167 kb on - strand, within Echvi_2763at 3297.261 kb on + strand, within Echvi_2763at 3297.357 kb on - strand, within Echvi_2763at 3297.357 kb on - strand, within Echvi_2763at 3297.378 kb on - strand, within Echvi_2763at 3297.381 kb on + strand, within Echvi_2763at 3297.413 kb on - strand, within Echvi_2763at 3297.543 kb on + strand, within Echvi_2763at 3297.549 kb on + strand, within Echvi_2763at 3297.550 kb on - strand, within Echvi_2763at 3297.550 kb on - strand, within Echvi_2763at 3297.562 kb on + strand, within Echvi_2763at 3297.563 kb on - strand, within Echvi_2763at 3297.563 kb on - strand, within Echvi_2763at 3297.621 kb on + strand, within Echvi_2763at 3297.637 kb on - strand, within Echvi_2763at 3297.802 kb on - strandat 3297.869 kb on + strandat 3297.874 kb on - strandat 3297.901 kb on + strandat 3297.901 kb on + strandat 3297.901 kb on + strandat 3297.902 kb on - strandat 3297.902 kb on - strandat 3297.902 kb on - strandat 3297.902 kb on - strandat 3297.904 kb on + strandat 3297.927 kb on - strandat 3297.927 kb on - strandat 3297.942 kb on + strandat 3297.974 kb on - strandat 3298.054 kb on - strandat 3298.059 kb on - strand, within Echvi_2764at 3298.062 kb on + strand, within Echvi_2764at 3298.062 kb on + strand, within Echvi_2764at 3298.063 kb on - strand, within Echvi_2764at 3298.094 kb on + strand, within Echvi_2764at 3298.102 kb on - strand, within Echvi_2764at 3298.102 kb on - strand, within Echvi_2764at 3298.124 kb on - strand, within Echvi_2764at 3298.128 kb on + strand, within Echvi_2764at 3298.129 kb on - strand, within Echvi_2764at 3298.130 kb on + strand, within Echvi_2764at 3298.130 kb on + strand, within Echvi_2764at 3298.131 kb on - strand, within Echvi_2764at 3298.131 kb on - strand, within Echvi_2764at 3298.140 kb on + strand, within Echvi_2764at 3298.140 kb on + strand, within Echvi_2764at 3298.275 kb on - strand, within Echvi_2764at 3298.362 kb on + strand, within Echvi_2764at 3298.362 kb on + strand, within Echvi_2764at 3298.363 kb on - strand, within Echvi_2764at 3298.363 kb on - strand, within Echvi_2764at 3298.365 kb on + strand, within Echvi_2764at 3298.366 kb on - strand, within Echvi_2764at 3298.366 kb on - strand, within Echvi_2764at 3298.366 kb on - strand, within Echvi_2764at 3298.366 kb on - strand, within Echvi_2764at 3298.367 kb on + strand, within Echvi_2764at 3298.367 kb on + strand, within Echvi_2764at 3298.367 kb on + strand, within Echvi_2764at 3298.367 kb on + strand, within Echvi_2764at 3298.367 kb on + strand, within Echvi_2764at 3298.368 kb on - strand, within Echvi_2764at 3298.368 kb on - strand, within Echvi_2764at 3298.368 kb on - strand, within Echvi_2764at 3298.368 kb on - strand, within Echvi_2764at 3298.382 kb on - strand, within Echvi_2764at 3298.385 kb on + strand, within Echvi_2764at 3298.400 kb on + strand, within Echvi_2764at 3298.471 kb on + strand, within Echvi_2764at 3298.472 kb on - strand, within Echvi_2764at 3298.480 kb on - strand, within Echvi_2764at 3298.511 kb on + strand, within Echvi_2764at 3298.547 kb on + strand, within Echvi_2764at 3298.548 kb on - strand, within Echvi_2764at 3298.548 kb on - strand, within Echvi_2764at 3298.565 kb on + strand, within Echvi_2764at 3298.611 kb on + strand, within Echvi_2764at 3298.612 kb on - strand, within Echvi_2764at 3298.612 kb on - strand, within Echvi_2764at 3298.612 kb on - strand, within Echvi_2764at 3298.703 kb on - strandat 3298.722 kb on + strandat 3298.794 kb on + strandat 3298.836 kb on + strandat 3298.837 kb on - strandat 3298.844 kb on - strandat 3298.890 kb on - strandat 3298.890 kb on - strandat 3298.892 kb on - strandat 3298.892 kb on - strandat 3298.892 kb on - strandat 3298.931 kb on + strandat 3298.931 kb on + strandat 3298.934 kb on + strandat 3298.935 kb on - strandat 3298.948 kb on + strandat 3298.953 kb on - strandat 3298.965 kb on + strandat 3298.965 kb on + strandat 3298.965 kb on + strandat 3298.970 kb on + strandat 3298.971 kb on - strandat 3299.033 kb on + strand, within Echvi_2765at 3299.033 kb on + strand, within Echvi_2765at 3299.034 kb on - strand, within Echvi_2765at 3299.044 kb on + strand, within Echvi_2765at 3299.045 kb on - strand, within Echvi_2765at 3299.049 kb on + strand, within Echvi_2765at 3299.049 kb on + strand, within Echvi_2765at 3299.050 kb on - strand, within Echvi_2765at 3299.111 kb on - strand, within Echvi_2765at 3299.186 kb on + strand, within Echvi_2765at 3299.277 kb on - strand, within Echvi_2765at 3299.277 kb on - strand, within Echvi_2765at 3299.292 kb on + strand, within Echvi_2765at 3299.293 kb on - strand, within Echvi_2765at 3299.293 kb on - strand, within Echvi_2765at 3299.296 kb on + strand, within Echvi_2765at 3299.297 kb on - strand, within Echvi_2765at 3299.297 kb on - strand, within Echvi_2765at 3299.297 kb on - strand, within Echvi_2765at 3299.297 kb on - strand, within Echvi_2765at 3299.297 kb on - strand, within Echvi_2765at 3299.380 kb on + strand, within Echvi_2765at 3299.414 kb on + strand, within Echvi_2765at 3299.415 kb on - strand, within Echvi_2765at 3299.437 kb on + strand, within Echvi_2765at 3299.489 kb on + strand, within Echvi_2765at 3299.490 kb on - strand, within Echvi_2765at 3299.490 kb on - strand, within Echvi_2765at 3299.490 kb on - strand, within Echvi_2765at 3299.491 kb on + strand, within Echvi_2765at 3299.491 kb on + strand, within Echvi_2765at 3299.491 kb on + strand, within Echvi_2765at 3299.491 kb on + strand, within Echvi_2765at 3299.491 kb on + strand, within Echvi_2765at 3299.491 kb on + strand, within Echvi_2765at 3299.491 kb on + strand, within Echvi_2765at 3299.491 kb on + strand, within Echvi_2765at 3299.491 kb on + strand, within Echvi_2765at 3299.491 kb on + strand, within Echvi_2765at 3299.491 kb on + strand, within Echvi_2765at 3299.491 kb on + strand, within Echvi_2765at 3299.491 kb on + strand, within Echvi_2765at 3299.492 kb on - strand, within Echvi_2765at 3299.492 kb on - strand, within Echvi_2765at 3299.492 kb on - strand, within Echvi_2765at 3299.492 kb on - strand, within Echvi_2765at 3299.492 kb on - strand, within Echvi_2765at 3299.492 kb on - strand, within Echvi_2765at 3299.492 kb on - strand, within Echvi_2765at 3299.492 kb on - strand, within Echvi_2765at 3299.492 kb on - strand, within Echvi_2765at 3299.572 kb on + strand, within Echvi_2765at 3299.572 kb on + strand, within Echvi_2765at 3299.573 kb on - strand, within Echvi_2765at 3299.573 kb on - strand, within Echvi_2765at 3299.573 kb on - strand, within Echvi_2765at 3299.573 kb on - strand, within Echvi_2765at 3299.573 kb on - strand, within Echvi_2765at 3299.575 kb on - strand, within Echvi_2765at 3299.581 kb on - strand, within Echvi_2765at 3299.593 kb on + strand, within Echvi_2765

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
remove
3,297,043 - Echvi_2763 0.50 +0.5
3,297,043 - Echvi_2763 0.50 +0.3
3,297,054 + Echvi_2763 0.51 -0.3
3,297,054 + Echvi_2763 0.51 +0.5
3,297,055 - Echvi_2763 0.51 -0.2
3,297,055 - Echvi_2763 0.51 -0.2
3,297,071 + Echvi_2763 0.52 +3.2
3,297,101 - Echvi_2763 0.53 +0.1
3,297,117 + Echvi_2763 0.54 -1.5
3,297,167 - Echvi_2763 0.57 -1.5
3,297,167 - Echvi_2763 0.57 -1.8
3,297,261 + Echvi_2763 0.62 -1.0
3,297,357 - Echvi_2763 0.67 +0.3
3,297,357 - Echvi_2763 0.67 -1.3
3,297,378 - Echvi_2763 0.68 -0.3
3,297,381 + Echvi_2763 0.68 +1.0
3,297,413 - Echvi_2763 0.70 -0.2
3,297,543 + Echvi_2763 0.77 +0.7
3,297,549 + Echvi_2763 0.77 -2.2
3,297,550 - Echvi_2763 0.77 +1.4
3,297,550 - Echvi_2763 0.77 +0.3
3,297,562 + Echvi_2763 0.78 -1.3
3,297,563 - Echvi_2763 0.78 +0.5
3,297,563 - Echvi_2763 0.78 +0.2
3,297,621 + Echvi_2763 0.81 -2.7
3,297,637 - Echvi_2763 0.82 -0.2
3,297,802 - -0.3
3,297,869 + +1.6
3,297,874 - -0.8
3,297,901 + -1.2
3,297,901 + -2.8
3,297,901 + -0.8
3,297,902 - -3.1
3,297,902 - +0.7
3,297,902 - -1.7
3,297,902 - +1.2
3,297,904 + -0.1
3,297,927 - -1.7
3,297,927 - -0.4
3,297,942 + +0.3
3,297,974 - +2.6
3,298,054 - +0.2
3,298,059 - Echvi_2764 0.10 +0.9
3,298,062 + Echvi_2764 0.11 +0.6
3,298,062 + Echvi_2764 0.11 -2.6
3,298,063 - Echvi_2764 0.11 -0.3
3,298,094 + Echvi_2764 0.15 +0.9
3,298,102 - Echvi_2764 0.16 +0.4
3,298,102 - Echvi_2764 0.16 +0.1
3,298,124 - Echvi_2764 0.19 +0.0
3,298,128 + Echvi_2764 0.20 +0.2
3,298,129 - Echvi_2764 0.20 -1.1
3,298,130 + Echvi_2764 0.20 -1.9
3,298,130 + Echvi_2764 0.20 +0.2
3,298,131 - Echvi_2764 0.20 -1.1
3,298,131 - Echvi_2764 0.20 +0.2
3,298,140 + Echvi_2764 0.22 +1.0
3,298,140 + Echvi_2764 0.22 -0.1
3,298,275 - Echvi_2764 0.41 +0.3
3,298,362 + Echvi_2764 0.53 -0.5
3,298,362 + Echvi_2764 0.53 -1.7
3,298,363 - Echvi_2764 0.53 -2.2
3,298,363 - Echvi_2764 0.53 -1.2
3,298,365 + Echvi_2764 0.54 -1.3
3,298,366 - Echvi_2764 0.54 +1.5
3,298,366 - Echvi_2764 0.54 -0.6
3,298,366 - Echvi_2764 0.54 -1.1
3,298,366 - Echvi_2764 0.54 +0.9
3,298,367 + Echvi_2764 0.54 +0.4
3,298,367 + Echvi_2764 0.54 +0.4
3,298,367 + Echvi_2764 0.54 -0.3
3,298,367 + Echvi_2764 0.54 -0.2
3,298,367 + Echvi_2764 0.54 +0.3
3,298,368 - Echvi_2764 0.54 -1.8
3,298,368 - Echvi_2764 0.54 -0.2
3,298,368 - Echvi_2764 0.54 +0.1
3,298,368 - Echvi_2764 0.54 +1.5
3,298,382 - Echvi_2764 0.56 +1.2
3,298,385 + Echvi_2764 0.56 -1.5
3,298,400 + Echvi_2764 0.59 -1.0
3,298,471 + Echvi_2764 0.69 -1.7
3,298,472 - Echvi_2764 0.69 -1.5
3,298,480 - Echvi_2764 0.70 +1.3
3,298,511 + Echvi_2764 0.74 +0.0
3,298,547 + Echvi_2764 0.79 -1.5
3,298,548 - Echvi_2764 0.80 -0.3
3,298,548 - Echvi_2764 0.80 -0.3
3,298,565 + Echvi_2764 0.82 -0.8
3,298,611 + Echvi_2764 0.89 -1.3
3,298,612 - Echvi_2764 0.89 +0.5
3,298,612 - Echvi_2764 0.89 -0.0
3,298,612 - Echvi_2764 0.89 -1.8
3,298,703 - -0.4
3,298,722 + +0.7
3,298,794 + -0.2
3,298,836 + -0.5
3,298,837 - -1.6
3,298,844 - -1.6
3,298,890 - -1.8
3,298,890 - -1.7
3,298,892 - +1.2
3,298,892 - -1.0
3,298,892 - -1.7
3,298,931 + -0.1
3,298,931 + -1.7
3,298,934 + -1.0
3,298,935 - -0.6
3,298,948 + -0.2
3,298,953 - +0.4
3,298,965 + -0.6
3,298,965 + +0.2
3,298,965 + +0.2
3,298,970 + +0.5
3,298,971 - -2.3
3,299,033 + Echvi_2765 0.11 -2.3
3,299,033 + Echvi_2765 0.11 +1.3
3,299,034 - Echvi_2765 0.11 +0.1
3,299,044 + Echvi_2765 0.12 +0.9
3,299,045 - Echvi_2765 0.12 +0.0
3,299,049 + Echvi_2765 0.12 +0.2
3,299,049 + Echvi_2765 0.12 +0.1
3,299,050 - Echvi_2765 0.12 +0.2
3,299,111 - Echvi_2765 0.18 -1.7
3,299,186 + Echvi_2765 0.25 -0.3
3,299,277 - Echvi_2765 0.34 +0.4
3,299,277 - Echvi_2765 0.34 -1.8
3,299,292 + Echvi_2765 0.35 -1.9
3,299,293 - Echvi_2765 0.35 +0.4
3,299,293 - Echvi_2765 0.35 +1.1
3,299,296 + Echvi_2765 0.35 -0.6
3,299,297 - Echvi_2765 0.36 -1.0
3,299,297 - Echvi_2765 0.36 +0.4
3,299,297 - Echvi_2765 0.36 -0.2
3,299,297 - Echvi_2765 0.36 +2.0
3,299,297 - Echvi_2765 0.36 -0.7
3,299,380 + Echvi_2765 0.43 +2.0
3,299,414 + Echvi_2765 0.47 +0.1
3,299,415 - Echvi_2765 0.47 +1.2
3,299,437 + Echvi_2765 0.49 -0.0
3,299,489 + Echvi_2765 0.54 +0.4
3,299,490 - Echvi_2765 0.54 +0.3
3,299,490 - Echvi_2765 0.54 -2.1
3,299,490 - Echvi_2765 0.54 +0.3
3,299,491 + Echvi_2765 0.54 -3.5
3,299,491 + Echvi_2765 0.54 +0.4
3,299,491 + Echvi_2765 0.54 +2.0
3,299,491 + Echvi_2765 0.54 -0.0
3,299,491 + Echvi_2765 0.54 +0.3
3,299,491 + Echvi_2765 0.54 -0.3
3,299,491 + Echvi_2765 0.54 +1.3
3,299,491 + Echvi_2765 0.54 -1.0
3,299,491 + Echvi_2765 0.54 -0.9
3,299,491 + Echvi_2765 0.54 -0.3
3,299,491 + Echvi_2765 0.54 +0.4
3,299,491 + Echvi_2765 0.54 +0.4
3,299,491 + Echvi_2765 0.54 -0.1
3,299,492 - Echvi_2765 0.54 -0.9
3,299,492 - Echvi_2765 0.54 +0.5
3,299,492 - Echvi_2765 0.54 -0.5
3,299,492 - Echvi_2765 0.54 +0.8
3,299,492 - Echvi_2765 0.54 -0.5
3,299,492 - Echvi_2765 0.54 +0.8
3,299,492 - Echvi_2765 0.54 -0.1
3,299,492 - Echvi_2765 0.54 +0.0
3,299,492 - Echvi_2765 0.54 -0.3
3,299,572 + Echvi_2765 0.61 +1.3
3,299,572 + Echvi_2765 0.61 -1.5
3,299,573 - Echvi_2765 0.62 -0.6
3,299,573 - Echvi_2765 0.62 -0.3
3,299,573 - Echvi_2765 0.62 +0.6
3,299,573 - Echvi_2765 0.62 -1.8
3,299,573 - Echvi_2765 0.62 -0.0
3,299,575 - Echvi_2765 0.62 +0.4
3,299,581 - Echvi_2765 0.62 -0.3
3,299,593 + Echvi_2765 0.63 +0.8

Or see this region's nucleotide sequence