Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2760 and Echvi_2761 are separated by 312 nucleotides Echvi_2761 and Echvi_2762 are separated by 520 nucleotides
Echvi_2760: Echvi_2760 - Signal transduction histidine kinase, at 3,287,870 to 3,291,925
_2760
Echvi_2761: Echvi_2761 - hypothetical protein, at 3,292,238 to 3,292,390
_2761
Echvi_2762: Echvi_2762 - TonB-linked outer membrane protein, SusC/RagA family, at 3,292,911 to 3,296,090
_2762
Position (kb)
3292
3293 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3291.276 kb on + strand, within Echvi_2760 at 3291.311 kb on - strand, within Echvi_2760 at 3291.341 kb on + strand, within Echvi_2760 at 3291.341 kb on + strand, within Echvi_2760 at 3291.341 kb on + strand, within Echvi_2760 at 3291.359 kb on + strand, within Echvi_2760 at 3291.360 kb on - strand, within Echvi_2760 at 3291.366 kb on - strand, within Echvi_2760 at 3291.370 kb on + strand, within Echvi_2760 at 3291.371 kb on - strand, within Echvi_2760 at 3291.371 kb on - strand, within Echvi_2760 at 3291.371 kb on - strand, within Echvi_2760 at 3291.371 kb on - strand, within Echvi_2760 at 3291.484 kb on - strand, within Echvi_2760 at 3291.487 kb on + strand, within Echvi_2760 at 3291.591 kb on + strand at 3291.591 kb on + strand at 3291.592 kb on - strand at 3291.592 kb on - strand at 3291.598 kb on - strand at 3291.623 kb on + strand at 3291.625 kb on + strand at 3291.626 kb on - strand at 3291.665 kb on - strand at 3291.665 kb on - strand at 3291.760 kb on + strand at 3291.780 kb on - strand at 3291.800 kb on - strand at 3291.840 kb on + strand at 3291.890 kb on + strand at 3291.890 kb on + strand at 3291.891 kb on - strand at 3291.896 kb on + strand at 3291.914 kb on - strand at 3291.926 kb on - strand at 3291.956 kb on - strand at 3292.163 kb on - strand at 3292.167 kb on + strand at 3292.173 kb on + strand at 3292.174 kb on - strand at 3292.174 kb on - strand at 3292.179 kb on + strand at 3292.211 kb on - strand at 3292.228 kb on - strand at 3292.228 kb on - strand at 3292.240 kb on - strand at 3292.244 kb on - strand at 3292.333 kb on + strand, within Echvi_2761 at 3292.333 kb on + strand, within Echvi_2761 at 3292.334 kb on - strand, within Echvi_2761 at 3292.334 kb on - strand, within Echvi_2761 at 3292.392 kb on + strand at 3292.433 kb on - strand at 3292.438 kb on - strand at 3292.486 kb on + strand at 3292.487 kb on - strand at 3292.490 kb on + strand at 3292.666 kb on + strand at 3292.705 kb on + strand at 3292.705 kb on + strand at 3292.725 kb on - strand at 3292.725 kb on - strand at 3292.725 kb on - strand at 3292.737 kb on - strand at 3292.778 kb on + strand at 3292.804 kb on + strand at 3292.804 kb on + strand at 3292.805 kb on - strand at 3292.805 kb on - strand at 3292.805 kb on - strand at 3292.805 kb on - strand at 3292.808 kb on + strand at 3292.809 kb on - strand at 3292.809 kb on - strand at 3292.835 kb on + strand at 3292.835 kb on + strand at 3292.835 kb on + strand at 3292.835 kb on + strand at 3292.836 kb on - strand at 3292.836 kb on - strand at 3292.838 kb on + strand at 3292.838 kb on + strand at 3292.838 kb on + strand at 3292.839 kb on - strand at 3292.840 kb on + strand at 3292.840 kb on + strand at 3292.841 kb on - strand at 3292.841 kb on - strand at 3292.841 kb on - strand at 3292.841 kb on - strand at 3292.855 kb on + strand at 3292.856 kb on - strand at 3292.856 kb on - strand at 3292.906 kb on + strand at 3292.959 kb on - strand at 3292.963 kb on - strand at 3293.004 kb on - strand at 3293.126 kb on + strand at 3293.163 kb on - strand at 3293.194 kb on + strand at 3293.195 kb on - strand at 3293.217 kb on - strand at 3293.217 kb on - strand at 3293.217 kb on - strand at 3293.237 kb on - strand, within Echvi_2762
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 3,291,276 + Echvi_2760 0.84 +1.0 3,291,311 - Echvi_2760 0.85 +1.2 3,291,341 + Echvi_2760 0.86 -0.5 3,291,341 + Echvi_2760 0.86 +0.1 3,291,341 + Echvi_2760 0.86 -0.4 3,291,359 + Echvi_2760 0.86 -2.3 3,291,360 - Echvi_2760 0.86 +0.6 3,291,366 - Echvi_2760 0.86 -0.3 3,291,370 + Echvi_2760 0.86 +0.1 3,291,371 - Echvi_2760 0.86 +0.3 3,291,371 - Echvi_2760 0.86 -0.4 3,291,371 - Echvi_2760 0.86 +0.2 3,291,371 - Echvi_2760 0.86 +1.9 3,291,484 - Echvi_2760 0.89 +0.3 3,291,487 + Echvi_2760 0.89 +1.2 3,291,591 + -0.8 3,291,591 + -1.6 3,291,592 - +0.4 3,291,592 - +0.8 3,291,598 - +0.4 3,291,623 + -0.3 3,291,625 + +1.0 3,291,626 - -0.5 3,291,665 - +0.0 3,291,665 - +1.3 3,291,760 + -1.5 3,291,780 - -0.7 3,291,800 - -1.7 3,291,840 + +0.2 3,291,890 + -0.6 3,291,890 + +0.5 3,291,891 - +0.2 3,291,896 + +1.0 3,291,914 - +1.2 3,291,926 - -0.6 3,291,956 - +0.0 3,292,163 - +0.2 3,292,167 + -0.1 3,292,173 + +0.1 3,292,174 - +1.0 3,292,174 - +1.1 3,292,179 + +0.1 3,292,211 - -1.6 3,292,228 - -1.0 3,292,228 - +0.4 3,292,240 - -0.9 3,292,244 - -0.2 3,292,333 + Echvi_2761 0.62 +0.9 3,292,333 + Echvi_2761 0.62 -0.3 3,292,334 - Echvi_2761 0.63 +0.7 3,292,334 - Echvi_2761 0.63 +0.8 3,292,392 + +1.3 3,292,433 - +0.7 3,292,438 - -0.8 3,292,486 + +0.6 3,292,487 - -1.5 3,292,490 + -1.0 3,292,666 + +0.5 3,292,705 + -0.2 3,292,705 + +0.1 3,292,725 - -2.1 3,292,725 - +0.8 3,292,725 - +2.0 3,292,737 - +0.5 3,292,778 + -1.8 3,292,804 + -0.2 3,292,804 + +1.5 3,292,805 - +0.0 3,292,805 - +0.2 3,292,805 - +0.3 3,292,805 - +1.8 3,292,808 + -0.6 3,292,809 - -0.9 3,292,809 - -0.0 3,292,835 + +3.2 3,292,835 + -1.5 3,292,835 + -1.5 3,292,835 + -1.2 3,292,836 - +1.0 3,292,836 - +1.0 3,292,838 + -2.3 3,292,838 + +0.4 3,292,838 + -1.3 3,292,839 - +1.0 3,292,840 + -1.9 3,292,840 + -2.5 3,292,841 - -0.6 3,292,841 - +0.4 3,292,841 - +1.2 3,292,841 - -0.1 3,292,855 + -0.6 3,292,856 - +1.9 3,292,856 - +1.1 3,292,906 + +0.3 3,292,959 - -1.0 3,292,963 - +0.7 3,293,004 - +0.2 3,293,126 + +0.6 3,293,163 - -0.4 3,293,194 + +0.0 3,293,195 - -0.5 3,293,217 - +1.3 3,293,217 - -0.5 3,293,217 - -0.8 3,293,237 - Echvi_2762 0.10 -0.8
Or see this region's nucleotide sequence