Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2212

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_2210 and Echvi_2211 are separated by 129 nucleotidesEchvi_2211 and Echvi_2212 are separated by 706 nucleotidesEchvi_2212 and Echvi_2213 overlap by 4 nucleotidesEchvi_2213 and Echvi_2214 are separated by 79 nucleotides Echvi_2210: Echvi_2210 - Lipoproteins, at 2,637,755 to 2,638,981 _2210 Echvi_2211: Echvi_2211 - hypothetical protein, at 2,639,111 to 2,639,245 _2211 Echvi_2212: Echvi_2212 - hypothetical protein, at 2,639,952 to 2,640,506 _2212 Echvi_2213: Echvi_2213 - TIGR02757 family protein, at 2,640,503 to 2,641,270 _2213 Echvi_2214: Echvi_2214 - orotate phosphoribosyltransferase, at 2,641,350 to 2,641,997 _2214 Position (kb) 2639 2640 2641Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2638.979 kb on + strandat 2638.980 kb on - strandat 2638.983 kb on - strandat 2639.047 kb on - strandat 2639.059 kb on + strandat 2639.060 kb on - strandat 2639.066 kb on - strandat 2639.076 kb on - strandat 2639.093 kb on + strandat 2639.097 kb on + strandat 2639.102 kb on + strandat 2639.103 kb on - strandat 2639.103 kb on - strandat 2639.143 kb on + strand, within Echvi_2211at 2639.144 kb on - strand, within Echvi_2211at 2639.144 kb on - strand, within Echvi_2211at 2639.174 kb on - strand, within Echvi_2211at 2639.174 kb on - strand, within Echvi_2211at 2639.174 kb on - strand, within Echvi_2211at 2639.180 kb on - strand, within Echvi_2211at 2639.180 kb on - strand, within Echvi_2211at 2639.182 kb on - strand, within Echvi_2211at 2639.210 kb on + strand, within Echvi_2211at 2639.217 kb on + strand, within Echvi_2211at 2639.217 kb on + strand, within Echvi_2211at 2639.217 kb on + strand, within Echvi_2211at 2639.217 kb on + strand, within Echvi_2211at 2639.218 kb on - strand, within Echvi_2211at 2639.218 kb on - strand, within Echvi_2211at 2639.218 kb on - strand, within Echvi_2211at 2639.218 kb on - strand, within Echvi_2211at 2639.219 kb on + strand, within Echvi_2211at 2639.249 kb on + strandat 2639.249 kb on + strandat 2639.271 kb on - strandat 2639.271 kb on - strandat 2639.333 kb on + strandat 2639.333 kb on + strandat 2639.333 kb on + strandat 2639.405 kb on - strandat 2639.408 kb on + strandat 2639.408 kb on + strandat 2639.540 kb on - strandat 2639.742 kb on + strandat 2639.743 kb on - strandat 2639.743 kb on - strandat 2639.745 kb on + strandat 2639.746 kb on - strandat 2639.746 kb on - strandat 2639.746 kb on - strandat 2639.747 kb on - strandat 2639.749 kb on - strandat 2639.848 kb on - strandat 2639.848 kb on - strandat 2639.848 kb on - strandat 2639.872 kb on - strandat 2639.918 kb on + strandat 2639.919 kb on - strandat 2639.971 kb on + strandat 2639.971 kb on + strandat 2639.972 kb on - strandat 2640.027 kb on - strand, within Echvi_2212at 2640.027 kb on - strand, within Echvi_2212at 2640.027 kb on - strand, within Echvi_2212at 2640.027 kb on - strand, within Echvi_2212at 2640.027 kb on - strand, within Echvi_2212at 2640.028 kb on + strand, within Echvi_2212at 2640.029 kb on - strand, within Echvi_2212at 2640.062 kb on + strand, within Echvi_2212at 2640.062 kb on + strand, within Echvi_2212at 2640.063 kb on - strand, within Echvi_2212at 2640.063 kb on - strand, within Echvi_2212at 2640.166 kb on + strand, within Echvi_2212at 2640.166 kb on + strand, within Echvi_2212at 2640.166 kb on + strand, within Echvi_2212at 2640.166 kb on + strand, within Echvi_2212at 2640.303 kb on + strand, within Echvi_2212at 2640.303 kb on + strand, within Echvi_2212at 2640.454 kb on - strandat 2640.502 kb on + strandat 2640.582 kb on + strand, within Echvi_2213at 2640.583 kb on - strand, within Echvi_2213at 2640.670 kb on + strand, within Echvi_2213at 2640.670 kb on + strand, within Echvi_2213at 2640.683 kb on - strand, within Echvi_2213at 2640.683 kb on - strand, within Echvi_2213at 2640.750 kb on + strand, within Echvi_2213at 2640.750 kb on + strand, within Echvi_2213at 2640.750 kb on + strand, within Echvi_2213at 2640.751 kb on - strand, within Echvi_2213at 2640.751 kb on - strand, within Echvi_2213at 2640.796 kb on + strand, within Echvi_2213at 2640.796 kb on + strand, within Echvi_2213at 2640.797 kb on - strand, within Echvi_2213at 2640.802 kb on - strand, within Echvi_2213at 2640.808 kb on + strand, within Echvi_2213at 2640.809 kb on - strand, within Echvi_2213at 2640.831 kb on - strand, within Echvi_2213at 2640.862 kb on + strand, within Echvi_2213at 2640.863 kb on - strand, within Echvi_2213at 2640.885 kb on + strand, within Echvi_2213at 2640.885 kb on + strand, within Echvi_2213at 2640.885 kb on + strand, within Echvi_2213at 2640.886 kb on - strand, within Echvi_2213at 2640.886 kb on - strand, within Echvi_2213at 2640.886 kb on - strand, within Echvi_2213at 2641.075 kb on - strand, within Echvi_2213at 2641.114 kb on - strand, within Echvi_2213at 2641.212 kb on + strandat 2641.213 kb on - strandat 2641.351 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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2,638,979 + -0.5
2,638,980 - -0.2
2,638,983 - -0.3
2,639,047 - -0.8
2,639,059 + -1.5
2,639,060 - +2.2
2,639,066 - +0.5
2,639,076 - +1.0
2,639,093 + +0.5
2,639,097 + -0.4
2,639,102 + +0.4
2,639,103 - +1.9
2,639,103 - -0.3
2,639,143 + Echvi_2211 0.24 -1.8
2,639,144 - Echvi_2211 0.24 +0.8
2,639,144 - Echvi_2211 0.24 -0.2
2,639,174 - Echvi_2211 0.47 +0.8
2,639,174 - Echvi_2211 0.47 -1.1
2,639,174 - Echvi_2211 0.47 -0.2
2,639,180 - Echvi_2211 0.51 -0.7
2,639,180 - Echvi_2211 0.51 +1.4
2,639,182 - Echvi_2211 0.53 +0.9
2,639,210 + Echvi_2211 0.73 +1.1
2,639,217 + Echvi_2211 0.79 +1.1
2,639,217 + Echvi_2211 0.79 +0.9
2,639,217 + Echvi_2211 0.79 -1.9
2,639,217 + Echvi_2211 0.79 -2.4
2,639,218 - Echvi_2211 0.79 +0.6
2,639,218 - Echvi_2211 0.79 +1.1
2,639,218 - Echvi_2211 0.79 -0.7
2,639,218 - Echvi_2211 0.79 -2.0
2,639,219 + Echvi_2211 0.80 -1.4
2,639,249 + +0.7
2,639,249 + +1.6
2,639,271 - -0.4
2,639,271 - +0.9
2,639,333 + +0.9
2,639,333 + -0.4
2,639,333 + -0.0
2,639,405 - +1.7
2,639,408 + +0.8
2,639,408 + -0.1
2,639,540 - +0.6
2,639,742 + -1.2
2,639,743 - -2.4
2,639,743 - -1.4
2,639,745 + +0.2
2,639,746 - +0.9
2,639,746 - +0.5
2,639,746 - -1.9
2,639,747 - +0.6
2,639,749 - +0.4
2,639,848 - +0.6
2,639,848 - -2.6
2,639,848 - +1.6
2,639,872 - -1.4
2,639,918 + +0.2
2,639,919 - -0.9
2,639,971 + -2.7
2,639,971 + -2.2
2,639,972 - -0.5
2,640,027 - Echvi_2212 0.14 -2.4
2,640,027 - Echvi_2212 0.14 -4.2
2,640,027 - Echvi_2212 0.14 +0.5
2,640,027 - Echvi_2212 0.14 -2.4
2,640,027 - Echvi_2212 0.14 -1.1
2,640,028 + Echvi_2212 0.14 +0.8
2,640,029 - Echvi_2212 0.14 +0.0
2,640,062 + Echvi_2212 0.20 -2.5
2,640,062 + Echvi_2212 0.20 -0.6
2,640,063 - Echvi_2212 0.20 -1.0
2,640,063 - Echvi_2212 0.20 -2.0
2,640,166 + Echvi_2212 0.39 -0.9
2,640,166 + Echvi_2212 0.39 +0.1
2,640,166 + Echvi_2212 0.39 -0.5
2,640,166 + Echvi_2212 0.39 -0.5
2,640,303 + Echvi_2212 0.63 +0.2
2,640,303 + Echvi_2212 0.63 -1.1
2,640,454 - +0.7
2,640,502 + -3.3
2,640,582 + Echvi_2213 0.10 -0.5
2,640,583 - Echvi_2213 0.10 -0.2
2,640,670 + Echvi_2213 0.22 -0.2
2,640,670 + Echvi_2213 0.22 +0.2
2,640,683 - Echvi_2213 0.23 +1.4
2,640,683 - Echvi_2213 0.23 -1.4
2,640,750 + Echvi_2213 0.32 -0.2
2,640,750 + Echvi_2213 0.32 +1.0
2,640,750 + Echvi_2213 0.32 -2.2
2,640,751 - Echvi_2213 0.32 +2.1
2,640,751 - Echvi_2213 0.32 -1.8
2,640,796 + Echvi_2213 0.38 +1.1
2,640,796 + Echvi_2213 0.38 -1.8
2,640,797 - Echvi_2213 0.38 -1.2
2,640,802 - Echvi_2213 0.39 +0.8
2,640,808 + Echvi_2213 0.40 -1.0
2,640,809 - Echvi_2213 0.40 +0.2
2,640,831 - Echvi_2213 0.43 -0.0
2,640,862 + Echvi_2213 0.47 -1.4
2,640,863 - Echvi_2213 0.47 -0.6
2,640,885 + Echvi_2213 0.50 +0.6
2,640,885 + Echvi_2213 0.50 +0.9
2,640,885 + Echvi_2213 0.50 -0.2
2,640,886 - Echvi_2213 0.50 -1.4
2,640,886 - Echvi_2213 0.50 +0.9
2,640,886 - Echvi_2213 0.50 +0.5
2,641,075 - Echvi_2213 0.74 -2.5
2,641,114 - Echvi_2213 0.80 +0.1
2,641,212 + -1.7
2,641,213 - -3.2
2,641,351 + +0.9

Or see this region's nucleotide sequence