Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1766 and Echvi_1767 are separated by 85 nucleotides Echvi_1767 and Echvi_1768 are separated by 114 nucleotides Echvi_1768 and Echvi_1769 are separated by 17 nucleotides Echvi_1769 and Echvi_1770 are separated by 119 nucleotides
Echvi_1766: Echvi_1766 - ATP synthase, F1 beta subunit, at 2,075,206 to 2,076,708
_1766
Echvi_1767: Echvi_1767 - ATP synthase, F1 epsilon subunit (delta in mitochondria), at 2,076,794 to 2,077,048
_1767
Echvi_1768: Echvi_1768 - hypothetical protein, at 2,077,163 to 2,078,371
_1768
Echvi_1769: Echvi_1769 - Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family), at 2,078,389 to 2,079,123
_1769
Echvi_1770: Echvi_1770 - glycerol kinase, at 2,079,243 to 2,080,745
_1770
Position (kb)
2077
2078
2079 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2076.706 kb on + strand at 2076.721 kb on + strand at 2077.057 kb on + strand at 2077.063 kb on + strand at 2077.064 kb on - strand at 2077.119 kb on + strand at 2077.122 kb on + strand at 2077.144 kb on - strand at 2077.146 kb on + strand at 2077.147 kb on - strand at 2077.158 kb on - strand at 2077.158 kb on - strand at 2077.165 kb on - strand at 2077.238 kb on + strand at 2077.239 kb on - strand at 2077.242 kb on - strand at 2077.390 kb on + strand, within Echvi_1768 at 2077.390 kb on + strand, within Echvi_1768 at 2077.414 kb on + strand, within Echvi_1768 at 2077.445 kb on - strand, within Echvi_1768 at 2077.445 kb on - strand, within Echvi_1768 at 2077.447 kb on + strand, within Echvi_1768 at 2077.486 kb on - strand, within Echvi_1768 at 2077.494 kb on + strand, within Echvi_1768 at 2077.494 kb on + strand, within Echvi_1768 at 2077.507 kb on + strand, within Echvi_1768 at 2077.605 kb on - strand, within Echvi_1768 at 2077.647 kb on + strand, within Echvi_1768 at 2077.651 kb on + strand, within Echvi_1768 at 2077.651 kb on + strand, within Echvi_1768 at 2077.652 kb on - strand, within Echvi_1768 at 2077.653 kb on + strand, within Echvi_1768 at 2077.653 kb on + strand, within Echvi_1768 at 2077.653 kb on + strand, within Echvi_1768 at 2077.653 kb on + strand, within Echvi_1768 at 2077.654 kb on - strand, within Echvi_1768 at 2077.654 kb on - strand, within Echvi_1768 at 2077.654 kb on - strand, within Echvi_1768 at 2077.654 kb on - strand, within Echvi_1768 at 2077.654 kb on - strand, within Echvi_1768 at 2077.654 kb on - strand, within Echvi_1768 at 2077.692 kb on - strand, within Echvi_1768 at 2077.721 kb on - strand, within Echvi_1768 at 2077.830 kb on + strand, within Echvi_1768 at 2077.839 kb on + strand, within Echvi_1768 at 2077.840 kb on - strand, within Echvi_1768 at 2077.885 kb on + strand, within Echvi_1768 at 2077.913 kb on - strand, within Echvi_1768 at 2077.944 kb on + strand, within Echvi_1768 at 2077.944 kb on + strand, within Echvi_1768 at 2077.944 kb on + strand, within Echvi_1768 at 2077.945 kb on - strand, within Echvi_1768 at 2077.945 kb on - strand, within Echvi_1768 at 2077.945 kb on - strand, within Echvi_1768 at 2077.969 kb on - strand, within Echvi_1768 at 2077.974 kb on + strand, within Echvi_1768 at 2078.015 kb on + strand, within Echvi_1768 at 2078.016 kb on - strand, within Echvi_1768 at 2078.066 kb on - strand, within Echvi_1768 at 2078.117 kb on + strand, within Echvi_1768 at 2078.125 kb on + strand, within Echvi_1768 at 2078.126 kb on - strand, within Echvi_1768 at 2078.128 kb on - strand, within Echvi_1768 at 2078.266 kb on + strand at 2078.362 kb on + strand at 2078.398 kb on + strand at 2078.446 kb on + strand at 2078.447 kb on - strand at 2078.447 kb on - strand at 2078.449 kb on + strand at 2078.465 kb on + strand, within Echvi_1769 at 2078.596 kb on + strand, within Echvi_1769 at 2078.635 kb on - strand, within Echvi_1769 at 2078.814 kb on - strand, within Echvi_1769 at 2078.814 kb on - strand, within Echvi_1769 at 2078.814 kb on - strand, within Echvi_1769 at 2078.814 kb on - strand, within Echvi_1769 at 2078.815 kb on + strand, within Echvi_1769 at 2078.815 kb on + strand, within Echvi_1769 at 2078.816 kb on - strand, within Echvi_1769 at 2078.816 kb on - strand, within Echvi_1769 at 2078.889 kb on + strand, within Echvi_1769 at 2078.897 kb on - strand, within Echvi_1769 at 2078.934 kb on + strand, within Echvi_1769 at 2078.934 kb on + strand, within Echvi_1769 at 2078.951 kb on + strand, within Echvi_1769 at 2078.951 kb on + strand, within Echvi_1769 at 2079.093 kb on + strand at 2079.093 kb on + strand at 2079.093 kb on + strand at 2079.094 kb on - strand at 2079.098 kb on - strand at 2079.113 kb on + strand at 2079.113 kb on + strand at 2079.113 kb on + strand at 2079.113 kb on + strand at 2079.113 kb on + strand at 2079.113 kb on + strand at 2079.113 kb on + strand at 2079.113 kb on + strand at 2079.114 kb on - strand at 2079.114 kb on - strand at 2079.114 kb on - strand at 2079.114 kb on - strand at 2079.114 kb on - strand at 2079.114 kb on - strand at 2079.114 kb on - strand at 2079.114 kb on - strand at 2079.114 kb on - strand at 2079.114 kb on - strand at 2079.114 kb on - strand at 2079.115 kb on + strand at 2079.115 kb on + strand at 2079.116 kb on - strand at 2079.116 kb on - strand at 2079.116 kb on - strand at 2079.146 kb on + strand at 2079.146 kb on + strand at 2079.146 kb on + strand at 2079.147 kb on - strand at 2079.147 kb on - strand at 2079.147 kb on - strand at 2079.147 kb on - strand at 2079.147 kb on - strand at 2079.175 kb on - strand at 2079.175 kb on - strand at 2079.188 kb on + strand at 2079.188 kb on + strand at 2079.188 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 2,076,706 + -1.8 2,076,721 + +1.3 2,077,057 + -0.0 2,077,063 + +0.5 2,077,064 - +0.8 2,077,119 + -0.8 2,077,122 + -0.3 2,077,144 - -2.2 2,077,146 + +0.5 2,077,147 - +2.1 2,077,158 - +0.4 2,077,158 - +0.2 2,077,165 - -0.3 2,077,238 + +1.2 2,077,239 - +1.5 2,077,242 - +0.9 2,077,390 + Echvi_1768 0.19 +0.4 2,077,390 + Echvi_1768 0.19 +0.7 2,077,414 + Echvi_1768 0.21 -0.9 2,077,445 - Echvi_1768 0.23 +1.0 2,077,445 - Echvi_1768 0.23 +0.9 2,077,447 + Echvi_1768 0.23 +0.4 2,077,486 - Echvi_1768 0.27 +3.7 2,077,494 + Echvi_1768 0.27 +3.1 2,077,494 + Echvi_1768 0.27 -0.0 2,077,507 + Echvi_1768 0.28 +0.9 2,077,605 - Echvi_1768 0.37 -0.3 2,077,647 + Echvi_1768 0.40 +0.5 2,077,651 + Echvi_1768 0.40 -2.3 2,077,651 + Echvi_1768 0.40 +0.4 2,077,652 - Echvi_1768 0.40 +1.2 2,077,653 + Echvi_1768 0.41 +1.0 2,077,653 + Echvi_1768 0.41 +1.3 2,077,653 + Echvi_1768 0.41 +0.3 2,077,653 + Echvi_1768 0.41 +0.4 2,077,654 - Echvi_1768 0.41 -0.4 2,077,654 - Echvi_1768 0.41 +0.8 2,077,654 - Echvi_1768 0.41 -0.6 2,077,654 - Echvi_1768 0.41 +2.8 2,077,654 - Echvi_1768 0.41 +2.0 2,077,654 - Echvi_1768 0.41 -0.4 2,077,692 - Echvi_1768 0.44 +1.6 2,077,721 - Echvi_1768 0.46 +1.5 2,077,830 + Echvi_1768 0.55 +0.6 2,077,839 + Echvi_1768 0.56 -0.9 2,077,840 - Echvi_1768 0.56 +1.7 2,077,885 + Echvi_1768 0.60 +1.6 2,077,913 - Echvi_1768 0.62 +0.7 2,077,944 + Echvi_1768 0.65 +1.4 2,077,944 + Echvi_1768 0.65 +3.0 2,077,944 + Echvi_1768 0.65 +0.5 2,077,945 - Echvi_1768 0.65 +1.0 2,077,945 - Echvi_1768 0.65 +1.1 2,077,945 - Echvi_1768 0.65 -1.8 2,077,969 - Echvi_1768 0.67 -0.7 2,077,974 + Echvi_1768 0.67 +0.4 2,078,015 + Echvi_1768 0.70 +0.0 2,078,016 - Echvi_1768 0.71 +0.2 2,078,066 - Echvi_1768 0.75 +1.7 2,078,117 + Echvi_1768 0.79 +0.3 2,078,125 + Echvi_1768 0.80 +1.5 2,078,126 - Echvi_1768 0.80 +2.0 2,078,128 - Echvi_1768 0.80 +0.1 2,078,266 + +1.1 2,078,362 + -0.8 2,078,398 + +1.0 2,078,446 + -1.9 2,078,447 - -1.3 2,078,447 - -0.6 2,078,449 + +0.6 2,078,465 + Echvi_1769 0.10 +0.1 2,078,596 + Echvi_1769 0.28 -1.6 2,078,635 - Echvi_1769 0.33 -0.3 2,078,814 - Echvi_1769 0.58 -0.5 2,078,814 - Echvi_1769 0.58 +0.1 2,078,814 - Echvi_1769 0.58 -1.5 2,078,814 - Echvi_1769 0.58 +1.1 2,078,815 + Echvi_1769 0.58 -1.0 2,078,815 + Echvi_1769 0.58 -2.0 2,078,816 - Echvi_1769 0.58 +0.5 2,078,816 - Echvi_1769 0.58 -1.0 2,078,889 + Echvi_1769 0.68 -0.6 2,078,897 - Echvi_1769 0.69 +1.6 2,078,934 + Echvi_1769 0.74 +0.2 2,078,934 + Echvi_1769 0.74 +0.5 2,078,951 + Echvi_1769 0.76 -1.2 2,078,951 + Echvi_1769 0.76 +2.2 2,079,093 + -0.6 2,079,093 + +0.4 2,079,093 + +0.2 2,079,094 - +2.2 2,079,098 - -1.1 2,079,113 + -0.1 2,079,113 + +0.2 2,079,113 + -0.6 2,079,113 + -2.5 2,079,113 + +1.2 2,079,113 + -0.3 2,079,113 + -3.2 2,079,113 + +1.2 2,079,114 - +0.9 2,079,114 - +0.1 2,079,114 - -0.8 2,079,114 - +0.8 2,079,114 - -0.6 2,079,114 - +1.1 2,079,114 - -1.5 2,079,114 - +0.2 2,079,114 - -0.6 2,079,114 - -0.5 2,079,114 - -0.3 2,079,115 + +0.1 2,079,115 + -0.2 2,079,116 - +1.1 2,079,116 - +0.2 2,079,116 - -1.2 2,079,146 + -2.8 2,079,146 + +0.7 2,079,146 + -0.9 2,079,147 - +0.8 2,079,147 - -1.2 2,079,147 - -0.9 2,079,147 - -0.8 2,079,147 - +0.1 2,079,175 - -1.4 2,079,175 - +1.7 2,079,188 + +0.6 2,079,188 + +0.3 2,079,188 + +0.0
Or see this region's nucleotide sequence