Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1768

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_1766 and Echvi_1767 are separated by 85 nucleotidesEchvi_1767 and Echvi_1768 are separated by 114 nucleotidesEchvi_1768 and Echvi_1769 are separated by 17 nucleotidesEchvi_1769 and Echvi_1770 are separated by 119 nucleotides Echvi_1766: Echvi_1766 - ATP synthase, F1 beta subunit, at 2,075,206 to 2,076,708 _1766 Echvi_1767: Echvi_1767 - ATP synthase, F1 epsilon subunit (delta in mitochondria), at 2,076,794 to 2,077,048 _1767 Echvi_1768: Echvi_1768 - hypothetical protein, at 2,077,163 to 2,078,371 _1768 Echvi_1769: Echvi_1769 - Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family), at 2,078,389 to 2,079,123 _1769 Echvi_1770: Echvi_1770 - glycerol kinase, at 2,079,243 to 2,080,745 _1770 Position (kb) 2077 2078 2079Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2076.706 kb on + strandat 2076.721 kb on + strandat 2077.057 kb on + strandat 2077.063 kb on + strandat 2077.064 kb on - strandat 2077.119 kb on + strandat 2077.122 kb on + strandat 2077.144 kb on - strandat 2077.146 kb on + strandat 2077.147 kb on - strandat 2077.158 kb on - strandat 2077.158 kb on - strandat 2077.165 kb on - strandat 2077.238 kb on + strandat 2077.239 kb on - strandat 2077.242 kb on - strandat 2077.390 kb on + strand, within Echvi_1768at 2077.390 kb on + strand, within Echvi_1768at 2077.414 kb on + strand, within Echvi_1768at 2077.445 kb on - strand, within Echvi_1768at 2077.445 kb on - strand, within Echvi_1768at 2077.447 kb on + strand, within Echvi_1768at 2077.486 kb on - strand, within Echvi_1768at 2077.494 kb on + strand, within Echvi_1768at 2077.494 kb on + strand, within Echvi_1768at 2077.507 kb on + strand, within Echvi_1768at 2077.605 kb on - strand, within Echvi_1768at 2077.647 kb on + strand, within Echvi_1768at 2077.651 kb on + strand, within Echvi_1768at 2077.651 kb on + strand, within Echvi_1768at 2077.652 kb on - strand, within Echvi_1768at 2077.653 kb on + strand, within Echvi_1768at 2077.653 kb on + strand, within Echvi_1768at 2077.653 kb on + strand, within Echvi_1768at 2077.653 kb on + strand, within Echvi_1768at 2077.654 kb on - strand, within Echvi_1768at 2077.654 kb on - strand, within Echvi_1768at 2077.654 kb on - strand, within Echvi_1768at 2077.654 kb on - strand, within Echvi_1768at 2077.654 kb on - strand, within Echvi_1768at 2077.654 kb on - strand, within Echvi_1768at 2077.692 kb on - strand, within Echvi_1768at 2077.721 kb on - strand, within Echvi_1768at 2077.830 kb on + strand, within Echvi_1768at 2077.839 kb on + strand, within Echvi_1768at 2077.840 kb on - strand, within Echvi_1768at 2077.885 kb on + strand, within Echvi_1768at 2077.913 kb on - strand, within Echvi_1768at 2077.944 kb on + strand, within Echvi_1768at 2077.944 kb on + strand, within Echvi_1768at 2077.944 kb on + strand, within Echvi_1768at 2077.945 kb on - strand, within Echvi_1768at 2077.945 kb on - strand, within Echvi_1768at 2077.945 kb on - strand, within Echvi_1768at 2077.969 kb on - strand, within Echvi_1768at 2077.974 kb on + strand, within Echvi_1768at 2078.015 kb on + strand, within Echvi_1768at 2078.016 kb on - strand, within Echvi_1768at 2078.066 kb on - strand, within Echvi_1768at 2078.117 kb on + strand, within Echvi_1768at 2078.125 kb on + strand, within Echvi_1768at 2078.126 kb on - strand, within Echvi_1768at 2078.128 kb on - strand, within Echvi_1768at 2078.266 kb on + strandat 2078.362 kb on + strandat 2078.398 kb on + strandat 2078.446 kb on + strandat 2078.447 kb on - strandat 2078.447 kb on - strandat 2078.449 kb on + strandat 2078.465 kb on + strand, within Echvi_1769at 2078.596 kb on + strand, within Echvi_1769at 2078.635 kb on - strand, within Echvi_1769at 2078.814 kb on - strand, within Echvi_1769at 2078.814 kb on - strand, within Echvi_1769at 2078.814 kb on - strand, within Echvi_1769at 2078.814 kb on - strand, within Echvi_1769at 2078.815 kb on + strand, within Echvi_1769at 2078.815 kb on + strand, within Echvi_1769at 2078.816 kb on - strand, within Echvi_1769at 2078.816 kb on - strand, within Echvi_1769at 2078.889 kb on + strand, within Echvi_1769at 2078.897 kb on - strand, within Echvi_1769at 2078.934 kb on + strand, within Echvi_1769at 2078.934 kb on + strand, within Echvi_1769at 2078.951 kb on + strand, within Echvi_1769at 2078.951 kb on + strand, within Echvi_1769at 2079.093 kb on + strandat 2079.093 kb on + strandat 2079.093 kb on + strandat 2079.094 kb on - strandat 2079.098 kb on - strandat 2079.113 kb on + strandat 2079.113 kb on + strandat 2079.113 kb on + strandat 2079.113 kb on + strandat 2079.113 kb on + strandat 2079.113 kb on + strandat 2079.113 kb on + strandat 2079.113 kb on + strandat 2079.114 kb on - strandat 2079.114 kb on - strandat 2079.114 kb on - strandat 2079.114 kb on - strandat 2079.114 kb on - strandat 2079.114 kb on - strandat 2079.114 kb on - strandat 2079.114 kb on - strandat 2079.114 kb on - strandat 2079.114 kb on - strandat 2079.114 kb on - strandat 2079.115 kb on + strandat 2079.115 kb on + strandat 2079.116 kb on - strandat 2079.116 kb on - strandat 2079.116 kb on - strandat 2079.146 kb on + strandat 2079.146 kb on + strandat 2079.146 kb on + strandat 2079.147 kb on - strandat 2079.147 kb on - strandat 2079.147 kb on - strandat 2079.147 kb on - strandat 2079.147 kb on - strandat 2079.175 kb on - strandat 2079.175 kb on - strandat 2079.188 kb on + strandat 2079.188 kb on + strandat 2079.188 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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2,076,706 + -1.8
2,076,721 + +1.3
2,077,057 + -0.0
2,077,063 + +0.5
2,077,064 - +0.8
2,077,119 + -0.8
2,077,122 + -0.3
2,077,144 - -2.2
2,077,146 + +0.5
2,077,147 - +2.1
2,077,158 - +0.4
2,077,158 - +0.2
2,077,165 - -0.3
2,077,238 + +1.2
2,077,239 - +1.5
2,077,242 - +0.9
2,077,390 + Echvi_1768 0.19 +0.4
2,077,390 + Echvi_1768 0.19 +0.7
2,077,414 + Echvi_1768 0.21 -0.9
2,077,445 - Echvi_1768 0.23 +1.0
2,077,445 - Echvi_1768 0.23 +0.9
2,077,447 + Echvi_1768 0.23 +0.4
2,077,486 - Echvi_1768 0.27 +3.7
2,077,494 + Echvi_1768 0.27 +3.1
2,077,494 + Echvi_1768 0.27 -0.0
2,077,507 + Echvi_1768 0.28 +0.9
2,077,605 - Echvi_1768 0.37 -0.3
2,077,647 + Echvi_1768 0.40 +0.5
2,077,651 + Echvi_1768 0.40 -2.3
2,077,651 + Echvi_1768 0.40 +0.4
2,077,652 - Echvi_1768 0.40 +1.2
2,077,653 + Echvi_1768 0.41 +1.0
2,077,653 + Echvi_1768 0.41 +1.3
2,077,653 + Echvi_1768 0.41 +0.3
2,077,653 + Echvi_1768 0.41 +0.4
2,077,654 - Echvi_1768 0.41 -0.4
2,077,654 - Echvi_1768 0.41 +0.8
2,077,654 - Echvi_1768 0.41 -0.6
2,077,654 - Echvi_1768 0.41 +2.8
2,077,654 - Echvi_1768 0.41 +2.0
2,077,654 - Echvi_1768 0.41 -0.4
2,077,692 - Echvi_1768 0.44 +1.6
2,077,721 - Echvi_1768 0.46 +1.5
2,077,830 + Echvi_1768 0.55 +0.6
2,077,839 + Echvi_1768 0.56 -0.9
2,077,840 - Echvi_1768 0.56 +1.7
2,077,885 + Echvi_1768 0.60 +1.6
2,077,913 - Echvi_1768 0.62 +0.7
2,077,944 + Echvi_1768 0.65 +1.4
2,077,944 + Echvi_1768 0.65 +3.0
2,077,944 + Echvi_1768 0.65 +0.5
2,077,945 - Echvi_1768 0.65 +1.0
2,077,945 - Echvi_1768 0.65 +1.1
2,077,945 - Echvi_1768 0.65 -1.8
2,077,969 - Echvi_1768 0.67 -0.7
2,077,974 + Echvi_1768 0.67 +0.4
2,078,015 + Echvi_1768 0.70 +0.0
2,078,016 - Echvi_1768 0.71 +0.2
2,078,066 - Echvi_1768 0.75 +1.7
2,078,117 + Echvi_1768 0.79 +0.3
2,078,125 + Echvi_1768 0.80 +1.5
2,078,126 - Echvi_1768 0.80 +2.0
2,078,128 - Echvi_1768 0.80 +0.1
2,078,266 + +1.1
2,078,362 + -0.8
2,078,398 + +1.0
2,078,446 + -1.9
2,078,447 - -1.3
2,078,447 - -0.6
2,078,449 + +0.6
2,078,465 + Echvi_1769 0.10 +0.1
2,078,596 + Echvi_1769 0.28 -1.6
2,078,635 - Echvi_1769 0.33 -0.3
2,078,814 - Echvi_1769 0.58 -0.5
2,078,814 - Echvi_1769 0.58 +0.1
2,078,814 - Echvi_1769 0.58 -1.5
2,078,814 - Echvi_1769 0.58 +1.1
2,078,815 + Echvi_1769 0.58 -1.0
2,078,815 + Echvi_1769 0.58 -2.0
2,078,816 - Echvi_1769 0.58 +0.5
2,078,816 - Echvi_1769 0.58 -1.0
2,078,889 + Echvi_1769 0.68 -0.6
2,078,897 - Echvi_1769 0.69 +1.6
2,078,934 + Echvi_1769 0.74 +0.2
2,078,934 + Echvi_1769 0.74 +0.5
2,078,951 + Echvi_1769 0.76 -1.2
2,078,951 + Echvi_1769 0.76 +2.2
2,079,093 + -0.6
2,079,093 + +0.4
2,079,093 + +0.2
2,079,094 - +2.2
2,079,098 - -1.1
2,079,113 + -0.1
2,079,113 + +0.2
2,079,113 + -0.6
2,079,113 + -2.5
2,079,113 + +1.2
2,079,113 + -0.3
2,079,113 + -3.2
2,079,113 + +1.2
2,079,114 - +0.9
2,079,114 - +0.1
2,079,114 - -0.8
2,079,114 - +0.8
2,079,114 - -0.6
2,079,114 - +1.1
2,079,114 - -1.5
2,079,114 - +0.2
2,079,114 - -0.6
2,079,114 - -0.5
2,079,114 - -0.3
2,079,115 + +0.1
2,079,115 + -0.2
2,079,116 - +1.1
2,079,116 - +0.2
2,079,116 - -1.2
2,079,146 + -2.8
2,079,146 + +0.7
2,079,146 + -0.9
2,079,147 - +0.8
2,079,147 - -1.2
2,079,147 - -0.9
2,079,147 - -0.8
2,079,147 - +0.1
2,079,175 - -1.4
2,079,175 - +1.7
2,079,188 + +0.6
2,079,188 + +0.3
2,079,188 + +0.0

Or see this region's nucleotide sequence