Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1679

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_1678 and Echvi_1679 are separated by 94 nucleotidesEchvi_1679 and Echvi_1680 are separated by 162 nucleotides Echvi_1678: Echvi_1678 - Predicted dehydrogenases and related proteins, at 1,964,625 to 1,965,722 _1678 Echvi_1679: Echvi_1679 - Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin, at 1,965,817 to 1,966,569 _1679 Echvi_1680: Echvi_1680 - transporter, SSS family, at 1,966,732 to 1,968,318 _1680 Position (kb) 1965 1966 1967Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1964.836 kb on + strand, within Echvi_1678at 1964.840 kb on + strand, within Echvi_1678at 1964.840 kb on + strand, within Echvi_1678at 1964.840 kb on + strand, within Echvi_1678at 1964.840 kb on + strand, within Echvi_1678at 1964.840 kb on + strand, within Echvi_1678at 1964.841 kb on - strand, within Echvi_1678at 1964.841 kb on - strand, within Echvi_1678at 1964.841 kb on - strand, within Echvi_1678at 1964.844 kb on + strand, within Echvi_1678at 1964.844 kb on + strand, within Echvi_1678at 1964.844 kb on + strand, within Echvi_1678at 1964.844 kb on + strand, within Echvi_1678at 1964.845 kb on - strand, within Echvi_1678at 1964.845 kb on - strand, within Echvi_1678at 1964.845 kb on - strand, within Echvi_1678at 1964.845 kb on - strand, within Echvi_1678at 1964.845 kb on - strand, within Echvi_1678at 1964.845 kb on - strand, within Echvi_1678at 1964.860 kb on + strand, within Echvi_1678at 1964.860 kb on + strand, within Echvi_1678at 1964.861 kb on - strand, within Echvi_1678at 1964.908 kb on + strand, within Echvi_1678at 1964.909 kb on - strand, within Echvi_1678at 1964.909 kb on - strand, within Echvi_1678at 1964.909 kb on - strand, within Echvi_1678at 1964.979 kb on - strand, within Echvi_1678at 1964.979 kb on - strand, within Echvi_1678at 1964.979 kb on - strand, within Echvi_1678at 1965.045 kb on - strand, within Echvi_1678at 1965.045 kb on - strand, within Echvi_1678at 1965.088 kb on - strand, within Echvi_1678at 1965.088 kb on - strand, within Echvi_1678at 1965.193 kb on - strand, within Echvi_1678at 1965.193 kb on - strand, within Echvi_1678at 1965.193 kb on - strand, within Echvi_1678at 1965.193 kb on - strand, within Echvi_1678at 1965.214 kb on + strand, within Echvi_1678at 1965.285 kb on - strand, within Echvi_1678at 1965.289 kb on - strand, within Echvi_1678at 1965.297 kb on - strand, within Echvi_1678at 1965.377 kb on + strand, within Echvi_1678at 1965.377 kb on + strand, within Echvi_1678at 1965.377 kb on + strand, within Echvi_1678at 1965.414 kb on + strand, within Echvi_1678at 1965.414 kb on + strand, within Echvi_1678at 1965.414 kb on + strand, within Echvi_1678at 1965.415 kb on - strand, within Echvi_1678at 1965.417 kb on - strand, within Echvi_1678at 1965.417 kb on - strand, within Echvi_1678at 1965.443 kb on + strand, within Echvi_1678at 1965.444 kb on - strand, within Echvi_1678at 1965.479 kb on + strand, within Echvi_1678at 1965.479 kb on + strand, within Echvi_1678at 1965.480 kb on - strand, within Echvi_1678at 1965.493 kb on - strand, within Echvi_1678at 1965.493 kb on - strand, within Echvi_1678at 1965.531 kb on + strand, within Echvi_1678at 1965.531 kb on + strand, within Echvi_1678at 1965.537 kb on - strand, within Echvi_1678at 1965.537 kb on - strand, within Echvi_1678at 1965.541 kb on - strand, within Echvi_1678at 1965.563 kb on + strand, within Echvi_1678at 1965.564 kb on - strand, within Echvi_1678at 1965.746 kb on + strandat 1965.753 kb on + strandat 1965.753 kb on + strandat 1965.754 kb on - strandat 1965.775 kb on + strandat 1965.906 kb on - strand, within Echvi_1679at 1965.937 kb on - strand, within Echvi_1679at 1965.937 kb on - strand, within Echvi_1679at 1966.028 kb on - strand, within Echvi_1679at 1966.111 kb on + strand, within Echvi_1679at 1966.211 kb on - strand, within Echvi_1679at 1966.276 kb on + strand, within Echvi_1679at 1966.276 kb on + strand, within Echvi_1679at 1966.277 kb on - strand, within Echvi_1679at 1966.340 kb on + strand, within Echvi_1679at 1966.340 kb on + strand, within Echvi_1679at 1966.341 kb on - strand, within Echvi_1679at 1966.346 kb on - strand, within Echvi_1679at 1966.346 kb on - strand, within Echvi_1679at 1966.346 kb on - strand, within Echvi_1679at 1966.346 kb on - strand, within Echvi_1679at 1966.474 kb on + strand, within Echvi_1679at 1966.513 kb on + strandat 1966.578 kb on + strandat 1966.578 kb on + strandat 1966.578 kb on + strandat 1966.578 kb on + strandat 1966.584 kb on + strandat 1966.584 kb on + strandat 1966.602 kb on - strandat 1966.602 kb on - strandat 1966.628 kb on + strandat 1966.629 kb on - strandat 1966.636 kb on + strandat 1966.636 kb on + strandat 1966.636 kb on + strandat 1966.636 kb on + strandat 1966.637 kb on - strandat 1966.712 kb on + strandat 1966.712 kb on + strandat 1966.714 kb on - strandat 1966.727 kb on + strandat 1966.749 kb on - strandat 1966.783 kb on + strandat 1966.887 kb on + strandat 1966.888 kb on - strandat 1966.916 kb on + strand, within Echvi_1680at 1966.916 kb on + strand, within Echvi_1680at 1966.917 kb on - strand, within Echvi_1680at 1966.917 kb on - strand, within Echvi_1680at 1966.917 kb on - strand, within Echvi_1680at 1966.955 kb on - strand, within Echvi_1680at 1966.960 kb on - strand, within Echvi_1680at 1966.960 kb on - strand, within Echvi_1680at 1966.967 kb on + strandat 1966.968 kb on - strand, within Echvi_1680at 1966.998 kb on + strand, within Echvi_1680at 1966.998 kb on + strand, within Echvi_1680at 1967.004 kb on + strand, within Echvi_1680at 1967.120 kb on - strand, within Echvi_1680at 1967.122 kb on - strand, within Echvi_1680at 1967.122 kb on - strand, within Echvi_1680at 1967.292 kb on - strand, within Echvi_1680at 1967.292 kb on - strand, within Echvi_1680at 1967.347 kb on + strand, within Echvi_1680at 1967.348 kb on - strand, within Echvi_1680at 1967.350 kb on - strand, within Echvi_1680at 1967.350 kb on - strand, within Echvi_1680at 1967.350 kb on - strand, within Echvi_1680at 1967.431 kb on + strand, within Echvi_1680

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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1,964,836 + Echvi_1678 0.19 +1.7
1,964,840 + Echvi_1678 0.20 -0.1
1,964,840 + Echvi_1678 0.20 +0.8
1,964,840 + Echvi_1678 0.20 -1.3
1,964,840 + Echvi_1678 0.20 -2.3
1,964,840 + Echvi_1678 0.20 -0.3
1,964,841 - Echvi_1678 0.20 -1.8
1,964,841 - Echvi_1678 0.20 +0.7
1,964,841 - Echvi_1678 0.20 +1.1
1,964,844 + Echvi_1678 0.20 -0.6
1,964,844 + Echvi_1678 0.20 -1.8
1,964,844 + Echvi_1678 0.20 -0.1
1,964,844 + Echvi_1678 0.20 -0.1
1,964,845 - Echvi_1678 0.20 +0.3
1,964,845 - Echvi_1678 0.20 -1.4
1,964,845 - Echvi_1678 0.20 +0.2
1,964,845 - Echvi_1678 0.20 -0.2
1,964,845 - Echvi_1678 0.20 +0.3
1,964,845 - Echvi_1678 0.20 -0.1
1,964,860 + Echvi_1678 0.21 -0.0
1,964,860 + Echvi_1678 0.21 +1.0
1,964,861 - Echvi_1678 0.21 -0.1
1,964,908 + Echvi_1678 0.26 -0.1
1,964,909 - Echvi_1678 0.26 -0.3
1,964,909 - Echvi_1678 0.26 -1.2
1,964,909 - Echvi_1678 0.26 -1.5
1,964,979 - Echvi_1678 0.32 +0.9
1,964,979 - Echvi_1678 0.32 -1.7
1,964,979 - Echvi_1678 0.32 -0.1
1,965,045 - Echvi_1678 0.38 -0.6
1,965,045 - Echvi_1678 0.38 -1.5
1,965,088 - Echvi_1678 0.42 +0.3
1,965,088 - Echvi_1678 0.42 +2.8
1,965,193 - Echvi_1678 0.52 -0.7
1,965,193 - Echvi_1678 0.52 +0.8
1,965,193 - Echvi_1678 0.52 -1.7
1,965,193 - Echvi_1678 0.52 -2.1
1,965,214 + Echvi_1678 0.54 +0.4
1,965,285 - Echvi_1678 0.60 -0.2
1,965,289 - Echvi_1678 0.60 +0.5
1,965,297 - Echvi_1678 0.61 -0.4
1,965,377 + Echvi_1678 0.68 +0.5
1,965,377 + Echvi_1678 0.68 +0.2
1,965,377 + Echvi_1678 0.68 -1.9
1,965,414 + Echvi_1678 0.72 +0.1
1,965,414 + Echvi_1678 0.72 +0.5
1,965,414 + Echvi_1678 0.72 -0.3
1,965,415 - Echvi_1678 0.72 -2.8
1,965,417 - Echvi_1678 0.72 +1.7
1,965,417 - Echvi_1678 0.72 -2.2
1,965,443 + Echvi_1678 0.74 -1.4
1,965,444 - Echvi_1678 0.75 -1.2
1,965,479 + Echvi_1678 0.78 -0.3
1,965,479 + Echvi_1678 0.78 +0.4
1,965,480 - Echvi_1678 0.78 +0.1
1,965,493 - Echvi_1678 0.79 -1.5
1,965,493 - Echvi_1678 0.79 -0.1
1,965,531 + Echvi_1678 0.83 +0.3
1,965,531 + Echvi_1678 0.83 -0.1
1,965,537 - Echvi_1678 0.83 +0.3
1,965,537 - Echvi_1678 0.83 -0.9
1,965,541 - Echvi_1678 0.83 +1.3
1,965,563 + Echvi_1678 0.85 -0.3
1,965,564 - Echvi_1678 0.86 -0.8
1,965,746 + +0.7
1,965,753 + -0.9
1,965,753 + +0.9
1,965,754 - +0.0
1,965,775 + -0.6
1,965,906 - Echvi_1679 0.12 -1.1
1,965,937 - Echvi_1679 0.16 +0.3
1,965,937 - Echvi_1679 0.16 -0.5
1,966,028 - Echvi_1679 0.28 -1.8
1,966,111 + Echvi_1679 0.39 -0.9
1,966,211 - Echvi_1679 0.52 +0.2
1,966,276 + Echvi_1679 0.61 -0.1
1,966,276 + Echvi_1679 0.61 -2.1
1,966,277 - Echvi_1679 0.61 +1.1
1,966,340 + Echvi_1679 0.69 -1.1
1,966,340 + Echvi_1679 0.69 -0.5
1,966,341 - Echvi_1679 0.70 -2.6
1,966,346 - Echvi_1679 0.70 -0.1
1,966,346 - Echvi_1679 0.70 +1.5
1,966,346 - Echvi_1679 0.70 +1.9
1,966,346 - Echvi_1679 0.70 -2.9
1,966,474 + Echvi_1679 0.87 -1.3
1,966,513 + +1.3
1,966,578 + -1.4
1,966,578 + +0.0
1,966,578 + +0.7
1,966,578 + -0.7
1,966,584 + -0.1
1,966,584 + -1.4
1,966,602 - -1.8
1,966,602 - +0.3
1,966,628 + +0.1
1,966,629 - +2.6
1,966,636 + -1.1
1,966,636 + +1.3
1,966,636 + +0.3
1,966,636 + +0.5
1,966,637 - +2.0
1,966,712 + -0.1
1,966,712 + +0.4
1,966,714 - -1.2
1,966,727 + -0.4
1,966,749 - -3.5
1,966,783 + -2.1
1,966,887 + -0.5
1,966,888 - -0.5
1,966,916 + Echvi_1680 0.12 -0.6
1,966,916 + Echvi_1680 0.12 +0.6
1,966,917 - Echvi_1680 0.12 -1.0
1,966,917 - Echvi_1680 0.12 +0.1
1,966,917 - Echvi_1680 0.12 -2.3
1,966,955 - Echvi_1680 0.14 -0.7
1,966,960 - Echvi_1680 0.14 +0.2
1,966,960 - Echvi_1680 0.14 -0.2
1,966,967 + +1.3
1,966,968 - Echvi_1680 0.15 -0.2
1,966,998 + Echvi_1680 0.17 +0.9
1,966,998 + Echvi_1680 0.17 -0.5
1,967,004 + Echvi_1680 0.17 +0.8
1,967,120 - Echvi_1680 0.24 -0.4
1,967,122 - Echvi_1680 0.25 +0.9
1,967,122 - Echvi_1680 0.25 -1.3
1,967,292 - Echvi_1680 0.35 +1.4
1,967,292 - Echvi_1680 0.35 +1.0
1,967,347 + Echvi_1680 0.39 +1.3
1,967,348 - Echvi_1680 0.39 +0.3
1,967,350 - Echvi_1680 0.39 -0.1
1,967,350 - Echvi_1680 0.39 -1.2
1,967,350 - Echvi_1680 0.39 +2.0
1,967,431 + Echvi_1680 0.44 -0.7

Or see this region's nucleotide sequence