Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1633 and Echvi_1634 are separated by 213 nucleotides Echvi_1634 and Echvi_1635 are separated by 201 nucleotides
Echvi_1633: Echvi_1633 - Transposase and inactivated derivatives, at 1,887,363 to 1,888,421
_1633
Echvi_1634: Echvi_1634 - hypothetical protein, at 1,888,635 to 1,888,754
_1634
Echvi_1635: Echvi_1635 - TonB-linked outer membrane protein, SusC/RagA family, at 1,888,956 to 1,892,222
_1635
Position (kb)
1887
1888
1889 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 1886.413 kb on + strand at 1886.471 kb on + strand at 1886.585 kb on + strand at 1886.732 kb on + strand at 1886.732 kb on + strand at 1886.732 kb on + strand at 1886.732 kb on + strand at 1886.733 kb on - strand at 1886.738 kb on - strand at 1886.784 kb on - strand at 1886.784 kb on - strand at 1886.832 kb on + strand at 1886.832 kb on + strand at 1886.836 kb on + strand at 1886.836 kb on + strand at 1886.837 kb on - strand at 1886.844 kb on + strand at 1886.845 kb on - strand at 1886.845 kb on - strand at 1886.845 kb on - strand at 1886.951 kb on + strand at 1886.975 kb on + strand at 1887.009 kb on - strand at 1887.009 kb on - strand at 1887.030 kb on + strand at 1888.484 kb on + strand at 1888.484 kb on + strand at 1888.484 kb on + strand at 1888.485 kb on - strand at 1888.512 kb on + strand at 1888.512 kb on + strand at 1888.512 kb on + strand at 1888.512 kb on + strand at 1888.527 kb on + strand at 1888.539 kb on + strand at 1888.540 kb on - strand at 1888.543 kb on - strand at 1888.549 kb on + strand at 1888.549 kb on + strand at 1888.549 kb on + strand at 1888.604 kb on + strand at 1888.604 kb on + strand at 1888.811 kb on - strand at 1888.812 kb on + strand at 1888.812 kb on + strand at 1888.813 kb on - strand at 1888.815 kb on + strand at 1888.815 kb on + strand at 1888.821 kb on - strand at 1888.821 kb on - strand at 1888.821 kb on - strand at 1888.952 kb on + strand at 1888.952 kb on + strand at 1888.952 kb on + strand at 1888.953 kb on - strand at 1889.124 kb on - strand at 1889.170 kb on + strand at 1889.174 kb on + strand at 1889.206 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 1,886,413 + -0.3 1,886,471 + -0.9 1,886,585 + -1.6 1,886,732 + -0.7 1,886,732 + -0.5 1,886,732 + +1.2 1,886,732 + -0.0 1,886,733 - -2.4 1,886,738 - +0.1 1,886,784 - -0.4 1,886,784 - -0.8 1,886,832 + +1.0 1,886,832 + +0.1 1,886,836 + +1.0 1,886,836 + -1.4 1,886,837 - +0.5 1,886,844 + +1.5 1,886,845 - -0.4 1,886,845 - -0.5 1,886,845 - +2.3 1,886,951 + -0.9 1,886,975 + +0.4 1,887,009 - -0.1 1,887,009 - +0.2 1,887,030 + -0.1 1,888,484 + +1.1 1,888,484 + -0.3 1,888,484 + +0.1 1,888,485 - -1.0 1,888,512 + +4.9 1,888,512 + -1.3 1,888,512 + +1.2 1,888,512 + +1.7 1,888,527 + +1.6 1,888,539 + +1.7 1,888,540 - -0.6 1,888,543 - -2.0 1,888,549 + -0.4 1,888,549 + -1.4 1,888,549 + -1.0 1,888,604 + -1.5 1,888,604 + -0.4 1,888,811 - +1.1 1,888,812 + -0.3 1,888,812 + -0.7 1,888,813 - +0.4 1,888,815 + +0.3 1,888,815 + +0.2 1,888,821 - -0.3 1,888,821 - -1.5 1,888,821 - +0.6 1,888,952 + +2.2 1,888,952 + +0.2 1,888,952 + +1.0 1,888,953 - -0.2 1,889,124 - -2.4 1,889,170 + -0.3 1,889,174 + -0.3 1,889,206 + +0.6
Or see this region's nucleotide sequence