Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1501 and Echvi_1502 are separated by 74 nucleotides Echvi_1502 and Echvi_1503 are separated by 75 nucleotides Echvi_1503 and Echvi_1504 are separated by 1 nucleotides
Echvi_1501: Echvi_1501 - Predicted transcriptional regulators, at 1,725,005 to 1,725,622
_1501
Echvi_1502: Echvi_1502 - Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog), at 1,725,697 to 1,726,197
_1502
Echvi_1503: Echvi_1503 - Uncharacterized conserved protein, at 1,726,273 to 1,726,755
_1503
Echvi_1504: Echvi_1504 - Uncharacterized protein related to deoxyribodipyrimidine photolyase, at 1,726,757 to 1,728,241
_1504
Position (kb)
1726
1727 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1725.304 kb on - strand, within Echvi_1501 at 1725.310 kb on - strand, within Echvi_1501 at 1725.310 kb on - strand, within Echvi_1501 at 1725.314 kb on + strand, within Echvi_1501 at 1725.315 kb on - strand, within Echvi_1501 at 1725.315 kb on - strand, within Echvi_1501 at 1725.315 kb on - strand, within Echvi_1501 at 1725.315 kb on - strand, within Echvi_1501 at 1725.316 kb on + strand, within Echvi_1501 at 1725.316 kb on + strand, within Echvi_1501 at 1725.393 kb on + strand, within Echvi_1501 at 1725.490 kb on + strand, within Echvi_1501 at 1725.491 kb on - strand, within Echvi_1501 at 1725.519 kb on + strand, within Echvi_1501 at 1725.521 kb on + strand, within Echvi_1501 at 1725.521 kb on + strand, within Echvi_1501 at 1725.521 kb on + strand, within Echvi_1501 at 1725.521 kb on + strand, within Echvi_1501 at 1725.522 kb on - strand, within Echvi_1501 at 1725.527 kb on + strand, within Echvi_1501 at 1725.527 kb on + strand, within Echvi_1501 at 1725.528 kb on - strand, within Echvi_1501 at 1725.528 kb on - strand, within Echvi_1501 at 1725.529 kb on + strand, within Echvi_1501 at 1725.543 kb on + strand, within Echvi_1501 at 1725.559 kb on + strand, within Echvi_1501 at 1725.559 kb on + strand, within Echvi_1501 at 1725.560 kb on - strand, within Echvi_1501 at 1725.565 kb on - strand at 1725.588 kb on - strand at 1725.617 kb on - strand at 1725.677 kb on + strand at 1725.683 kb on + strand at 1725.849 kb on + strand, within Echvi_1502 at 1725.893 kb on - strand, within Echvi_1502 at 1725.893 kb on - strand, within Echvi_1502 at 1725.893 kb on - strand, within Echvi_1502 at 1725.917 kb on - strand, within Echvi_1502 at 1725.972 kb on + strand, within Echvi_1502 at 1726.009 kb on - strand, within Echvi_1502 at 1726.121 kb on - strand, within Echvi_1502 at 1726.125 kb on - strand, within Echvi_1502 at 1726.136 kb on - strand, within Echvi_1502 at 1726.191 kb on + strand at 1726.191 kb on + strand at 1726.192 kb on - strand at 1726.261 kb on + strand at 1726.268 kb on + strand at 1726.269 kb on - strand at 1726.269 kb on - strand at 1726.282 kb on + strand at 1726.283 kb on - strand at 1726.283 kb on - strand at 1726.368 kb on + strand, within Echvi_1503 at 1726.369 kb on - strand, within Echvi_1503 at 1726.396 kb on - strand, within Echvi_1503 at 1726.494 kb on + strand, within Echvi_1503 at 1726.494 kb on + strand, within Echvi_1503 at 1726.618 kb on + strand, within Echvi_1503 at 1726.618 kb on + strand, within Echvi_1503 at 1726.618 kb on + strand, within Echvi_1503 at 1726.618 kb on + strand, within Echvi_1503 at 1726.618 kb on + strand, within Echvi_1503 at 1726.619 kb on - strand, within Echvi_1503 at 1726.619 kb on - strand, within Echvi_1503 at 1726.743 kb on + strand at 1726.743 kb on + strand at 1726.753 kb on + strand at 1726.843 kb on - strand at 1726.870 kb on + strand at 1726.871 kb on - strand at 1726.909 kb on + strand, within Echvi_1504 at 1726.909 kb on + strand, within Echvi_1504 at 1726.909 kb on + strand, within Echvi_1504 at 1726.909 kb on + strand, within Echvi_1504 at 1726.910 kb on - strand, within Echvi_1504 at 1726.910 kb on - strand, within Echvi_1504 at 1726.910 kb on - strand, within Echvi_1504 at 1726.910 kb on - strand, within Echvi_1504 at 1726.919 kb on + strand, within Echvi_1504 at 1726.919 kb on + strand, within Echvi_1504 at 1726.919 kb on + strand, within Echvi_1504 at 1726.919 kb on + strand, within Echvi_1504 at 1726.920 kb on - strand, within Echvi_1504 at 1726.953 kb on + strand, within Echvi_1504 at 1726.953 kb on + strand, within Echvi_1504 at 1726.958 kb on + strand, within Echvi_1504 at 1726.958 kb on + strand, within Echvi_1504 at 1726.959 kb on - strand, within Echvi_1504 at 1727.134 kb on + strand, within Echvi_1504 at 1727.177 kb on + strand, within Echvi_1504 at 1727.177 kb on + strand, within Echvi_1504 at 1727.360 kb on + strand, within Echvi_1504 at 1727.687 kb on + strand, within Echvi_1504
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 1,725,304 - Echvi_1501 0.48 -0.4 1,725,310 - Echvi_1501 0.49 +0.5 1,725,310 - Echvi_1501 0.49 -0.9 1,725,314 + Echvi_1501 0.50 +0.0 1,725,315 - Echvi_1501 0.50 -0.6 1,725,315 - Echvi_1501 0.50 -0.6 1,725,315 - Echvi_1501 0.50 +0.1 1,725,315 - Echvi_1501 0.50 +0.8 1,725,316 + Echvi_1501 0.50 -0.3 1,725,316 + Echvi_1501 0.50 -1.0 1,725,393 + Echvi_1501 0.63 +0.3 1,725,490 + Echvi_1501 0.78 -0.7 1,725,491 - Echvi_1501 0.79 +1.2 1,725,519 + Echvi_1501 0.83 +1.5 1,725,521 + Echvi_1501 0.83 -2.3 1,725,521 + Echvi_1501 0.83 +1.0 1,725,521 + Echvi_1501 0.83 +0.1 1,725,521 + Echvi_1501 0.83 -0.6 1,725,522 - Echvi_1501 0.84 +0.7 1,725,527 + Echvi_1501 0.84 +0.2 1,725,527 + Echvi_1501 0.84 +1.1 1,725,528 - Echvi_1501 0.85 +0.1 1,725,528 - Echvi_1501 0.85 -1.9 1,725,529 + Echvi_1501 0.85 -0.0 1,725,543 + Echvi_1501 0.87 +0.8 1,725,559 + Echvi_1501 0.90 -0.1 1,725,559 + Echvi_1501 0.90 -0.2 1,725,560 - Echvi_1501 0.90 +0.5 1,725,565 - -1.7 1,725,588 - +0.6 1,725,617 - +0.0 1,725,677 + -0.8 1,725,683 + -1.3 1,725,849 + Echvi_1502 0.30 -1.1 1,725,893 - Echvi_1502 0.39 -2.4 1,725,893 - Echvi_1502 0.39 -1.7 1,725,893 - Echvi_1502 0.39 -0.9 1,725,917 - Echvi_1502 0.44 +0.3 1,725,972 + Echvi_1502 0.55 -0.8 1,726,009 - Echvi_1502 0.62 +0.4 1,726,121 - Echvi_1502 0.85 -1.2 1,726,125 - Echvi_1502 0.85 +0.8 1,726,136 - Echvi_1502 0.88 +0.3 1,726,191 + +0.8 1,726,191 + +0.8 1,726,192 - +0.5 1,726,261 + -1.7 1,726,268 + +0.0 1,726,269 - -1.2 1,726,269 - +0.3 1,726,282 + -0.8 1,726,283 - -0.9 1,726,283 - +0.4 1,726,368 + Echvi_1503 0.20 -2.4 1,726,369 - Echvi_1503 0.20 -1.4 1,726,396 - Echvi_1503 0.25 +0.5 1,726,494 + Echvi_1503 0.46 +0.9 1,726,494 + Echvi_1503 0.46 -1.6 1,726,618 + Echvi_1503 0.71 -2.1 1,726,618 + Echvi_1503 0.71 -0.5 1,726,618 + Echvi_1503 0.71 -0.8 1,726,618 + Echvi_1503 0.71 -1.9 1,726,618 + Echvi_1503 0.71 -0.6 1,726,619 - Echvi_1503 0.72 -0.9 1,726,619 - Echvi_1503 0.72 -1.0 1,726,743 + -0.4 1,726,743 + +1.6 1,726,753 + -1.0 1,726,843 - +0.7 1,726,870 + +0.8 1,726,871 - +0.0 1,726,909 + Echvi_1504 0.10 -2.2 1,726,909 + Echvi_1504 0.10 +0.1 1,726,909 + Echvi_1504 0.10 -0.6 1,726,909 + Echvi_1504 0.10 +0.1 1,726,910 - Echvi_1504 0.10 +1.5 1,726,910 - Echvi_1504 0.10 -0.5 1,726,910 - Echvi_1504 0.10 +1.9 1,726,910 - Echvi_1504 0.10 -2.1 1,726,919 + Echvi_1504 0.11 +1.3 1,726,919 + Echvi_1504 0.11 +1.2 1,726,919 + Echvi_1504 0.11 -1.5 1,726,919 + Echvi_1504 0.11 -0.8 1,726,920 - Echvi_1504 0.11 +0.1 1,726,953 + Echvi_1504 0.13 -1.3 1,726,953 + Echvi_1504 0.13 -2.2 1,726,958 + Echvi_1504 0.14 -2.5 1,726,958 + Echvi_1504 0.14 -1.7 1,726,959 - Echvi_1504 0.14 +0.2 1,727,134 + Echvi_1504 0.25 -0.8 1,727,177 + Echvi_1504 0.28 -1.8 1,727,177 + Echvi_1504 0.28 -0.8 1,727,360 + Echvi_1504 0.41 +3.2 1,727,687 + Echvi_1504 0.63 +0.3
Or see this region's nucleotide sequence