Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0657 and Echvi_0658 are separated by 215 nucleotides Echvi_0658 and Echvi_0659 overlap by 17 nucleotides Echvi_0659 and Echvi_0660 are separated by 279 nucleotides Echvi_0660 and Echvi_0661 are separated by 64 nucleotides
Echvi_0657: Echvi_0657 - hypothetical protein, at 741,732 to 742,397
_0657
Echvi_0658: Echvi_0658 - glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase, at 742,613 to 743,203
_0658
Echvi_0659: Echvi_0659 - Uncharacterized membrane protein, required for colicin V production, at 743,187 to 743,732
_0659
Echvi_0660: Echvi_0660 - Uncharacterized conserved protein, at 744,012 to 744,458
_0660
Echvi_0661: Echvi_0661 - pyridoxine 5'-phosphate synthase, at 744,523 to 745,248
_0661
Position (kb)
743
744 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 742.240 kb on + strand, within Echvi_0657 at 742.240 kb on + strand, within Echvi_0657 at 742.241 kb on - strand, within Echvi_0657 at 742.241 kb on - strand, within Echvi_0657 at 742.241 kb on - strand, within Echvi_0657 at 742.296 kb on + strand, within Echvi_0657 at 742.296 kb on + strand, within Echvi_0657 at 742.357 kb on - strand at 742.388 kb on - strand at 742.411 kb on + strand at 742.412 kb on - strand at 742.418 kb on + strand at 742.485 kb on + strand at 742.523 kb on - strand at 742.537 kb on - strand at 742.568 kb on - strand at 742.572 kb on + strand at 742.598 kb on + strand at 742.598 kb on + strand at 742.598 kb on + strand at 742.598 kb on + strand at 742.599 kb on - strand at 742.602 kb on + strand at 742.603 kb on - strand at 742.603 kb on - strand at 742.603 kb on - strand at 742.603 kb on - strand at 742.647 kb on + strand at 742.683 kb on + strand, within Echvi_0658 at 742.684 kb on - strand, within Echvi_0658 at 742.695 kb on + strand, within Echvi_0658 at 742.695 kb on + strand, within Echvi_0658 at 742.696 kb on - strand, within Echvi_0658 at 742.742 kb on + strand, within Echvi_0658 at 742.772 kb on - strand, within Echvi_0658 at 742.773 kb on + strand, within Echvi_0658 at 742.773 kb on + strand, within Echvi_0658 at 742.807 kb on + strand, within Echvi_0658 at 742.807 kb on + strand, within Echvi_0658 at 742.894 kb on - strand, within Echvi_0658 at 742.894 kb on - strand, within Echvi_0658 at 743.004 kb on + strand, within Echvi_0658 at 743.004 kb on + strand, within Echvi_0658 at 743.063 kb on + strand, within Echvi_0658 at 743.122 kb on + strand, within Echvi_0658 at 743.122 kb on + strand, within Echvi_0658 at 743.122 kb on + strand, within Echvi_0658 at 743.122 kb on + strand, within Echvi_0658 at 743.165 kb on - strand at 743.192 kb on + strand at 743.192 kb on + strand at 743.192 kb on + strand at 743.239 kb on - strand at 743.261 kb on + strand, within Echvi_0659 at 743.289 kb on - strand, within Echvi_0659 at 743.394 kb on - strand, within Echvi_0659 at 743.394 kb on - strand, within Echvi_0659 at 743.421 kb on - strand, within Echvi_0659 at 743.435 kb on + strand, within Echvi_0659 at 743.549 kb on + strand, within Echvi_0659 at 743.550 kb on - strand, within Echvi_0659 at 743.631 kb on - strand, within Echvi_0659 at 743.682 kb on - strand at 743.683 kb on + strand at 743.684 kb on - strand at 743.691 kb on + strand at 743.711 kb on + strand at 743.711 kb on + strand at 743.711 kb on + strand at 743.711 kb on + strand at 743.712 kb on - strand at 743.712 kb on - strand at 743.712 kb on - strand at 743.734 kb on + strand at 743.734 kb on + strand at 743.740 kb on + strand at 743.747 kb on - strand at 743.750 kb on + strand at 743.750 kb on + strand at 743.751 kb on - strand at 743.751 kb on - strand at 743.751 kb on - strand at 743.751 kb on - strand at 743.754 kb on + strand at 743.821 kb on + strand at 743.906 kb on + strand at 743.907 kb on - strand at 743.907 kb on - strand at 743.907 kb on - strand at 744.126 kb on + strand, within Echvi_0660 at 744.138 kb on - strand, within Echvi_0660 at 744.182 kb on + strand, within Echvi_0660 at 744.186 kb on + strand, within Echvi_0660 at 744.201 kb on - strand, within Echvi_0660 at 744.256 kb on + strand, within Echvi_0660 at 744.256 kb on + strand, within Echvi_0660 at 744.257 kb on - strand, within Echvi_0660 at 744.300 kb on + strand, within Echvi_0660 at 744.301 kb on - strand, within Echvi_0660 at 744.359 kb on + strand, within Echvi_0660 at 744.359 kb on + strand, within Echvi_0660 at 744.360 kb on - strand, within Echvi_0660 at 744.365 kb on + strand, within Echvi_0660 at 744.439 kb on - strand at 744.511 kb on + strand at 744.511 kb on + strand at 744.511 kb on + strand at 744.512 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 742,240 + Echvi_0657 0.76 -1.8 742,240 + Echvi_0657 0.76 -0.2 742,241 - Echvi_0657 0.76 -1.7 742,241 - Echvi_0657 0.76 -0.2 742,241 - Echvi_0657 0.76 -1.2 742,296 + Echvi_0657 0.85 +1.3 742,296 + Echvi_0657 0.85 -1.8 742,357 - -1.4 742,388 - +1.4 742,411 + -1.6 742,412 - -1.9 742,418 + +0.0 742,485 + -0.3 742,523 - +0.3 742,537 - -1.1 742,568 - +0.7 742,572 + -0.2 742,598 + -0.5 742,598 + -0.3 742,598 + +2.1 742,598 + +0.1 742,599 - -1.2 742,602 + -0.1 742,603 - -0.9 742,603 - -1.1 742,603 - -0.3 742,603 - -1.1 742,647 + +0.8 742,683 + Echvi_0658 0.12 -1.2 742,684 - Echvi_0658 0.12 +1.7 742,695 + Echvi_0658 0.14 +0.3 742,695 + Echvi_0658 0.14 +0.7 742,696 - Echvi_0658 0.14 +0.6 742,742 + Echvi_0658 0.22 +0.7 742,772 - Echvi_0658 0.27 -1.8 742,773 + Echvi_0658 0.27 -0.0 742,773 + Echvi_0658 0.27 -0.5 742,807 + Echvi_0658 0.33 +0.3 742,807 + Echvi_0658 0.33 -0.6 742,894 - Echvi_0658 0.48 +0.0 742,894 - Echvi_0658 0.48 -3.0 743,004 + Echvi_0658 0.66 -1.0 743,004 + Echvi_0658 0.66 -0.7 743,063 + Echvi_0658 0.76 +3.1 743,122 + Echvi_0658 0.86 -0.9 743,122 + Echvi_0658 0.86 +1.3 743,122 + Echvi_0658 0.86 +1.7 743,122 + Echvi_0658 0.86 -0.0 743,165 - -2.0 743,192 + -1.0 743,192 + +0.7 743,192 + +0.4 743,239 - -0.3 743,261 + Echvi_0659 0.14 +1.9 743,289 - Echvi_0659 0.19 -0.4 743,394 - Echvi_0659 0.38 +0.1 743,394 - Echvi_0659 0.38 -1.0 743,421 - Echvi_0659 0.43 +1.1 743,435 + Echvi_0659 0.45 +0.7 743,549 + Echvi_0659 0.66 +0.1 743,550 - Echvi_0659 0.66 +0.9 743,631 - Echvi_0659 0.81 +1.2 743,682 - -1.7 743,683 + +1.0 743,684 - -0.8 743,691 + -0.6 743,711 + +2.3 743,711 + +0.5 743,711 + -0.5 743,711 + -2.6 743,712 - -0.3 743,712 - -0.2 743,712 - -0.1 743,734 + +3.0 743,734 + +5.9 743,740 + -0.1 743,747 - -0.6 743,750 + -1.0 743,750 + -0.6 743,751 - +0.5 743,751 - -0.6 743,751 - -0.8 743,751 - +0.3 743,754 + -0.8 743,821 + -0.2 743,906 + +0.6 743,907 - +0.1 743,907 - +1.3 743,907 - -1.0 744,126 + Echvi_0660 0.26 -2.4 744,138 - Echvi_0660 0.28 +0.1 744,182 + Echvi_0660 0.38 -2.2 744,186 + Echvi_0660 0.39 -1.2 744,201 - Echvi_0660 0.42 -2.7 744,256 + Echvi_0660 0.55 +0.2 744,256 + Echvi_0660 0.55 +0.5 744,257 - Echvi_0660 0.55 -0.7 744,300 + Echvi_0660 0.64 +0.3 744,301 - Echvi_0660 0.65 -2.1 744,359 + Echvi_0660 0.78 -0.2 744,359 + Echvi_0660 0.78 -0.4 744,360 - Echvi_0660 0.78 -0.8 744,365 + Echvi_0660 0.79 -2.2 744,439 - -0.2 744,511 + -2.0 744,511 + +0.1 744,511 + -1.6 744,512 - -2.4
Or see this region's nucleotide sequence