Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0545 and Echvi_0546 are separated by 73 nucleotides Echvi_0546 and Echvi_0547 are separated by 30 nucleotides
Echvi_0545: Echvi_0545 - hypothetical protein, at 611,042 to 613,243
_0545
Echvi_0546: Echvi_0546 - hypothetical protein, at 613,317 to 614,129
_0546
Echvi_0547: Echvi_0547 - SusD family., at 614,160 to 616,307
_0547
Position (kb) 613
614
615 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 612.415 kb on + strand, within Echvi_0545 at 612.415 kb on + strand, within Echvi_0545 at 612.415 kb on + strand, within Echvi_0545 at 612.415 kb on + strand, within Echvi_0545 at 612.416 kb on - strand, within Echvi_0545 at 612.417 kb on + strand, within Echvi_0545 at 612.420 kb on + strand, within Echvi_0545 at 612.420 kb on + strand, within Echvi_0545 at 612.460 kb on + strand, within Echvi_0545 at 612.460 kb on + strand, within Echvi_0545 at 612.461 kb on - strand, within Echvi_0545 at 612.462 kb on + strand, within Echvi_0545 at 612.494 kb on - strand, within Echvi_0545 at 612.525 kb on + strand, within Echvi_0545 at 612.548 kb on + strand, within Echvi_0545 at 612.553 kb on - strand, within Echvi_0545 at 612.569 kb on - strand, within Echvi_0545 at 612.569 kb on - strand, within Echvi_0545 at 612.569 kb on - strand, within Echvi_0545 at 612.624 kb on + strand, within Echvi_0545 at 612.625 kb on - strand, within Echvi_0545 at 612.625 kb on - strand, within Echvi_0545 at 612.627 kb on + strand, within Echvi_0545 at 612.628 kb on - strand, within Echvi_0545 at 612.636 kb on + strand, within Echvi_0545 at 612.637 kb on - strand, within Echvi_0545 at 612.637 kb on - strand, within Echvi_0545 at 612.647 kb on - strand, within Echvi_0545 at 612.658 kb on - strand, within Echvi_0545 at 612.658 kb on - strand, within Echvi_0545 at 612.662 kb on - strand, within Echvi_0545 at 612.705 kb on + strand, within Echvi_0545 at 612.736 kb on + strand, within Echvi_0545 at 612.736 kb on + strand, within Echvi_0545 at 612.737 kb on - strand, within Echvi_0545 at 612.737 kb on - strand, within Echvi_0545 at 612.737 kb on - strand, within Echvi_0545 at 612.737 kb on - strand, within Echvi_0545 at 612.739 kb on - strand, within Echvi_0545 at 612.775 kb on - strand, within Echvi_0545 at 612.792 kb on - strand, within Echvi_0545 at 612.858 kb on + strand, within Echvi_0545 at 612.858 kb on + strand, within Echvi_0545 at 612.859 kb on - strand, within Echvi_0545 at 612.859 kb on - strand, within Echvi_0545 at 612.868 kb on + strand, within Echvi_0545 at 612.869 kb on - strand, within Echvi_0545 at 612.869 kb on - strand, within Echvi_0545 at 612.887 kb on - strand, within Echvi_0545 at 613.043 kb on - strand at 613.043 kb on - strand at 613.190 kb on - strand at 613.221 kb on + strand at 613.222 kb on - strand at 613.227 kb on - strand at 613.304 kb on - strand at 613.314 kb on + strand at 613.315 kb on - strand at 613.348 kb on + strand at 613.349 kb on - strand at 613.391 kb on + strand at 613.392 kb on - strand at 613.511 kb on + strand, within Echvi_0546 at 613.511 kb on + strand, within Echvi_0546 at 613.556 kb on - strand, within Echvi_0546 at 613.560 kb on + strand, within Echvi_0546 at 613.560 kb on + strand, within Echvi_0546 at 613.561 kb on - strand, within Echvi_0546 at 613.601 kb on + strand, within Echvi_0546 at 613.602 kb on - strand, within Echvi_0546 at 613.603 kb on + strand, within Echvi_0546 at 613.745 kb on + strand, within Echvi_0546 at 613.745 kb on + strand, within Echvi_0546 at 613.763 kb on + strand, within Echvi_0546 at 613.820 kb on + strand, within Echvi_0546 at 613.820 kb on + strand, within Echvi_0546 at 613.853 kb on + strand, within Echvi_0546 at 613.853 kb on + strand, within Echvi_0546 at 613.855 kb on + strand, within Echvi_0546 at 613.965 kb on + strand, within Echvi_0546 at 613.966 kb on - strand, within Echvi_0546 at 614.010 kb on + strand, within Echvi_0546 at 614.010 kb on + strand, within Echvi_0546 at 614.010 kb on + strand, within Echvi_0546 at 614.011 kb on - strand, within Echvi_0546 at 614.011 kb on - strand, within Echvi_0546 at 614.054 kb on - strand at 614.110 kb on - strand at 614.110 kb on - strand at 614.113 kb on + strand at 614.114 kb on - strand at 614.114 kb on - strand at 614.114 kb on - strand at 614.114 kb on - strand at 614.114 kb on - strand at 614.114 kb on - strand at 614.153 kb on + strand at 614.157 kb on - strand at 614.224 kb on + strand at 614.224 kb on + strand at 614.237 kb on + strand at 614.242 kb on + strand at 614.291 kb on - strand at 614.321 kb on - strand at 614.404 kb on + strand, within Echvi_0547 at 614.486 kb on + strand, within Echvi_0547 at 614.487 kb on - strand, within Echvi_0547 at 614.487 kb on - strand, within Echvi_0547 at 614.487 kb on - strand, within Echvi_0547 at 614.487 kb on - strand, within Echvi_0547 at 614.553 kb on - strand, within Echvi_0547 at 614.574 kb on + strand, within Echvi_0547 at 614.575 kb on - strand, within Echvi_0547 at 614.604 kb on + strand, within Echvi_0547 at 614.604 kb on + strand, within Echvi_0547 at 614.665 kb on + strand, within Echvi_0547 at 614.665 kb on + strand, within Echvi_0547 at 614.666 kb on - strand, within Echvi_0547 at 614.738 kb on + strand, within Echvi_0547 at 614.739 kb on - strand, within Echvi_0547 at 614.746 kb on + strand, within Echvi_0547 at 614.746 kb on + strand, within Echvi_0547 at 614.746 kb on + strand, within Echvi_0547 at 614.747 kb on - strand, within Echvi_0547 at 614.747 kb on - strand, within Echvi_0547 at 614.888 kb on + strand, within Echvi_0547 at 614.889 kb on - strand, within Echvi_0547 at 614.890 kb on + strand, within Echvi_0547 at 614.924 kb on + strand, within Echvi_0547 at 614.977 kb on - strand, within Echvi_0547 at 614.977 kb on - strand, within Echvi_0547 at 614.977 kb on - strand, within Echvi_0547 at 615.034 kb on + strand, within Echvi_0547 at 615.085 kb on + strand, within Echvi_0547 at 615.085 kb on + strand, within Echvi_0547 at 615.086 kb on - strand, within Echvi_0547 at 615.094 kb on + strand, within Echvi_0547
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 612,415 + Echvi_0545 0.62 -2.3 612,415 + Echvi_0545 0.62 +0.1 612,415 + Echvi_0545 0.62 -0.2 612,415 + Echvi_0545 0.62 +0.6 612,416 - Echvi_0545 0.62 -0.3 612,417 + Echvi_0545 0.62 +1.3 612,420 + Echvi_0545 0.63 -1.6 612,420 + Echvi_0545 0.63 -2.5 612,460 + Echvi_0545 0.64 +1.1 612,460 + Echvi_0545 0.64 -0.4 612,461 - Echvi_0545 0.64 -0.0 612,462 + Echvi_0545 0.64 -0.6 612,494 - Echvi_0545 0.66 -0.6 612,525 + Echvi_0545 0.67 +0.3 612,548 + Echvi_0545 0.68 +0.7 612,553 - Echvi_0545 0.69 -0.6 612,569 - Echvi_0545 0.69 -1.7 612,569 - Echvi_0545 0.69 -1.6 612,569 - Echvi_0545 0.69 -1.4 612,624 + Echvi_0545 0.72 +0.2 612,625 - Echvi_0545 0.72 -3.0 612,625 - Echvi_0545 0.72 +0.2 612,627 + Echvi_0545 0.72 +0.7 612,628 - Echvi_0545 0.72 +0.1 612,636 + Echvi_0545 0.72 -0.3 612,637 - Echvi_0545 0.72 +3.4 612,637 - Echvi_0545 0.72 +0.3 612,647 - Echvi_0545 0.73 -1.6 612,658 - Echvi_0545 0.73 -0.3 612,658 - Echvi_0545 0.73 +1.2 612,662 - Echvi_0545 0.74 -0.1 612,705 + Echvi_0545 0.76 +1.0 612,736 + Echvi_0545 0.77 +0.5 612,736 + Echvi_0545 0.77 +1.9 612,737 - Echvi_0545 0.77 -1.6 612,737 - Echvi_0545 0.77 -0.3 612,737 - Echvi_0545 0.77 -1.5 612,737 - Echvi_0545 0.77 -0.9 612,739 - Echvi_0545 0.77 -1.3 612,775 - Echvi_0545 0.79 -1.6 612,792 - Echvi_0545 0.79 -0.3 612,858 + Echvi_0545 0.82 +0.4 612,858 + Echvi_0545 0.82 +0.2 612,859 - Echvi_0545 0.83 -1.8 612,859 - Echvi_0545 0.83 -0.1 612,868 + Echvi_0545 0.83 +1.2 612,869 - Echvi_0545 0.83 +0.7 612,869 - Echvi_0545 0.83 -0.4 612,887 - Echvi_0545 0.84 +0.8 613,043 - +0.0 613,043 - +0.0 613,190 - -1.2 613,221 + -0.8 613,222 - -0.8 613,227 - -1.0 613,304 - +1.5 613,314 + -1.8 613,315 - -0.4 613,348 + +1.8 613,349 - -3.3 613,391 + -1.6 613,392 - +1.8 613,511 + Echvi_0546 0.24 +0.1 613,511 + Echvi_0546 0.24 +0.8 613,556 - Echvi_0546 0.29 +0.4 613,560 + Echvi_0546 0.30 +1.5 613,560 + Echvi_0546 0.30 -2.2 613,561 - Echvi_0546 0.30 +1.2 613,601 + Echvi_0546 0.35 +0.7 613,602 - Echvi_0546 0.35 +0.2 613,603 + Echvi_0546 0.35 +1.0 613,745 + Echvi_0546 0.53 +0.3 613,745 + Echvi_0546 0.53 +0.8 613,763 + Echvi_0546 0.55 +0.5 613,820 + Echvi_0546 0.62 -0.6 613,820 + Echvi_0546 0.62 +0.4 613,853 + Echvi_0546 0.66 -0.4 613,853 + Echvi_0546 0.66 -0.1 613,855 + Echvi_0546 0.66 -1.5 613,965 + Echvi_0546 0.80 +0.3 613,966 - Echvi_0546 0.80 +1.8 614,010 + Echvi_0546 0.85 -0.6 614,010 + Echvi_0546 0.85 +0.4 614,010 + Echvi_0546 0.85 +1.1 614,011 - Echvi_0546 0.85 -0.9 614,011 - Echvi_0546 0.85 +0.3 614,054 - -0.2 614,110 - +1.7 614,110 - -4.3 614,113 + -1.7 614,114 - -0.1 614,114 - -2.5 614,114 - +0.4 614,114 - +0.7 614,114 - -0.2 614,114 - -2.4 614,153 + -1.8 614,157 - +0.1 614,224 + -2.5 614,224 + -0.8 614,237 + -0.0 614,242 + +1.5 614,291 - -0.3 614,321 - -1.3 614,404 + Echvi_0547 0.11 +0.4 614,486 + Echvi_0547 0.15 +0.6 614,487 - Echvi_0547 0.15 +1.4 614,487 - Echvi_0547 0.15 -1.9 614,487 - Echvi_0547 0.15 -1.8 614,487 - Echvi_0547 0.15 +0.2 614,553 - Echvi_0547 0.18 -1.6 614,574 + Echvi_0547 0.19 -1.8 614,575 - Echvi_0547 0.19 -0.3 614,604 + Echvi_0547 0.21 -1.5 614,604 + Echvi_0547 0.21 +0.4 614,665 + Echvi_0547 0.24 +0.8 614,665 + Echvi_0547 0.24 -1.2 614,666 - Echvi_0547 0.24 -0.6 614,738 + Echvi_0547 0.27 -0.8 614,739 - Echvi_0547 0.27 -0.3 614,746 + Echvi_0547 0.27 -1.7 614,746 + Echvi_0547 0.27 +0.3 614,746 + Echvi_0547 0.27 -1.6 614,747 - Echvi_0547 0.27 -0.6 614,747 - Echvi_0547 0.27 +0.9 614,888 + Echvi_0547 0.34 +0.6 614,889 - Echvi_0547 0.34 +0.7 614,890 + Echvi_0547 0.34 +0.1 614,924 + Echvi_0547 0.36 -0.3 614,977 - Echvi_0547 0.38 +0.5 614,977 - Echvi_0547 0.38 -1.6 614,977 - Echvi_0547 0.38 -3.9 615,034 + Echvi_0547 0.41 +3.0 615,085 + Echvi_0547 0.43 -0.2 615,085 + Echvi_0547 0.43 -0.2 615,086 - Echvi_0547 0.43 +0.3 615,094 + Echvi_0547 0.43 -0.0
Or see this region's nucleotide sequence