Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_18050

Experiment: m.b. Cephalothin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.005 mg/ml
4,196,102	+				+1.4
4,196,168	+				+1.0
4,196,168	+				+1.6
4,196,169	-				-0.3
4,196,169	-				+0.4
4,196,169	-				+1.6
4,196,169	-				+0.9
4,196,171	-				+0.1
4,196,180	+				+1.5
4,196,180	+				+1.2
4,196,181	-				-0.1
4,196,207	-				+0.5
4,196,225	-				+0.5
4,196,314	-				+0.0
4,196,346	+				+1.2
4,196,369	-				+0.8
4,196,370	+				-0.2
4,196,448	-				+0.3
4,196,448	-				-1.9
4,196,453	+				-0.6
4,196,454	-				+0.6
4,196,456	+				-0.7
4,196,456	+				+0.2
4,196,457	-				+2.3
4,196,457	-				-1.0
4,196,457	-				-0.6
4,196,457	-				-0.1
4,196,709	-		CA264_18045	0.59	+0.2
4,196,762	+		CA264_18045	0.69	+0.2
4,196,763	-		CA264_18045	0.69	-0.1
4,196,834	-		CA264_18045	0.84	+0.0
4,196,914	+				-0.0
4,197,105	-				+0.1
4,197,147	-				+0.5
4,197,167	-		CA264_18050	0.11	-0.7
4,197,194	-		CA264_18050	0.13	-0.6
4,197,279	-		CA264_18050	0.18	+0.0
4,197,302	+		CA264_18050	0.20	-0.2
4,197,305	+		CA264_18050	0.20	-1.1
4,197,316	-		CA264_18050	0.21	-0.4
4,197,321	-		CA264_18050	0.21	-0.4
4,197,338	+		CA264_18050	0.22	-1.3
4,197,338	+		CA264_18050	0.22	+0.2
4,197,392	+		CA264_18050	0.26	-0.6
4,197,458	+		CA264_18050	0.30	+0.2
4,197,494	+		CA264_18050	0.32	-0.9
4,197,648	-		CA264_18050	0.42	+0.8
4,197,651	+		CA264_18050	0.42	-0.4
4,197,652	-		CA264_18050	0.42	-1.0
4,197,653	+		CA264_18050	0.42	-0.7
4,197,653	+		CA264_18050	0.42	-1.9
4,197,727	-		CA264_18050	0.47	-0.8
4,197,878	+		CA264_18050	0.57	+0.1
4,197,903	+		CA264_18050	0.58	-0.1
4,197,904	-		CA264_18050	0.58	+2.2
4,197,974	+		CA264_18050	0.63	+0.5
4,197,975	-		CA264_18050	0.63	-0.5
4,197,975	-		CA264_18050	0.63	-1.2
4,197,975	-		CA264_18050	0.63	-0.8
4,198,110	-		CA264_18050	0.71	-1.1
4,198,119	-		CA264_18050	0.72	+1.8
4,198,119	-		CA264_18050	0.72	-0.0
4,198,119	-		CA264_18050	0.72	-1.4
4,198,238	+		CA264_18050	0.80	+0.2
4,198,268	+		CA264_18050	0.81	-0.9
4,198,268	+		CA264_18050	0.81	+1.6
4,198,404	-				-0.5
4,198,407	-				-0.0
4,198,410	-				-0.0
4,198,444	+				-1.3
4,198,445	-				-0.1
4,198,478	-				-1.0
4,198,551	+				-0.2
4,198,563	-				+1.2
4,198,563	-				+1.4
4,198,576	-				+2.1
4,198,576	-				+1.8
4,198,577	+				+1.5
4,198,598	+				+1.9
4,198,619	+				+1.9
4,198,676	+				+2.1
4,198,704	+				+2.6
4,198,705	-				+2.4
4,198,709	+				+1.6
4,198,709	+				+2.6
4,198,744	+				+1.3
4,198,744	+				+1.4
4,198,759	+				+1.5
4,198,759	+				+1.3
4,198,774	+				+0.6
4,198,774	+				+2.1
4,198,774	+				+2.2
4,198,788	+				+1.4
4,198,788	+				+0.8
4,198,789	-				+2.2
4,198,868	+		CA264_18055	0.14	+1.8
4,198,898	+		CA264_18055	0.18	+1.3
4,198,942	+		CA264_18055	0.25	+0.9
4,198,944	+		CA264_18055	0.25	+0.9
4,199,058	+		CA264_18055	0.42	+1.8
4,199,058	+		CA264_18055	0.42	+1.7
4,199,059	-		CA264_18055	0.42	+1.3
4,199,061	+		CA264_18055	0.42	+0.9
4,199,061	+		CA264_18055	0.42	+1.2
4,199,062	-		CA264_18055	0.42	+1.8
4,199,062	-		CA264_18055	0.42	+2.9
4,199,100	+		CA264_18055	0.48	+0.9
4,199,108	+		CA264_18055	0.49	+2.2
4,199,108	+		CA264_18055	0.49	+1.7
4,199,151	+		CA264_18055	0.55	+1.5
4,199,152	-		CA264_18055	0.55	+1.9
4,199,197	-		CA264_18055	0.62	+2.2
4,199,197	-		CA264_18055	0.62	+1.5
4,199,266	+		CA264_18055	0.72	+1.2
4,199,266	+		CA264_18055	0.72	+0.9
4,199,266	+		CA264_18055	0.72	+1.0
4,199,267	-		CA264_18055	0.72	+2.0
4,199,279	+		CA264_18055	0.74	+2.2
4,199,279	+		CA264_18055	0.74	-0.0
4,199,280	-		CA264_18055	0.74	+2.1
4,199,280	-		CA264_18055	0.74	+1.9
4,199,301	+		CA264_18055	0.77	+1.6
4,199,301	+		CA264_18055	0.77	+2.0
4,199,302	-		CA264_18055	0.77	+2.4
4,199,302	-		CA264_18055	0.77	+2.2
4,199,302	-		CA264_18055	0.77	+2.7
4,199,302	-		CA264_18055	0.77	+1.6
4,199,348	-		CA264_18055	0.84	+1.5
4,199,348	-		CA264_18055	0.84	+1.2
4,199,362	+		CA264_18055	0.86	+1.2
4,199,362	+		CA264_18055	0.86	+1.1
4,199,363	-		CA264_18055	0.86	+1.1
4,199,368	+		CA264_18055	0.87	+1.4
4,199,368	+		CA264_18055	0.87	+1.8
4,199,369	-		CA264_18055	0.87	+1.1
4,199,403	+				+1.1
4,199,417	+				+1.5
4,199,425	-				+2.1
4,199,425	-				+3.1
4,199,425	-				+1.8
4,199,425	-				+1.8
4,199,425	-				+1.9
4,199,431	-				+2.0
4,199,431	-				+2.0
4,199,431	-				+2.2
4,199,468	+				+1.4
4,199,469	-				+1.5
4,199,471	+				+1.4
4,199,482	-				+1.0
4,199,540	+				+2.2