Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_14305

Experiment: m.b. Cephalothin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.005 mg/ml
3,356,076	-		CA264_14295	0.38	+0.6
3,356,104	+		CA264_14295	0.41	+0.3
3,356,104	+		CA264_14295	0.41	-2.2
3,356,197	-		CA264_14295	0.51	-0.5
3,356,204	+		CA264_14295	0.52	-2.4
3,356,353	-		CA264_14295	0.68	-1.0
3,356,385	+		CA264_14295	0.72	-1.4
3,356,386	-		CA264_14295	0.72	-0.3
3,356,386	-		CA264_14295	0.72	+2.4
3,356,386	-		CA264_14295	0.72	-1.2
3,356,391	-		CA264_14295	0.72	-0.7
3,356,507	+		CA264_14295	0.85	-0.5
3,356,507	+		CA264_14295	0.85	-1.7
3,356,507	+		CA264_14295	0.85	-2.9
3,356,508	-		CA264_14295	0.85	+1.0
3,356,508	-		CA264_14295	0.85	-0.6
3,356,525	+		CA264_14295	0.87	+0.3
3,356,574	-				-1.6
3,356,575	+				-1.2
3,356,576	-				-0.6
3,356,642	-				-1.9
3,356,656	-				+1.8
3,356,720	+		CA264_14300	0.20	-1.3
3,356,748	+		CA264_14300	0.28	-2.5
3,356,748	+		CA264_14300	0.28	-2.1
3,356,749	-		CA264_14300	0.28	-0.4
3,356,749	-		CA264_14300	0.28	-0.0
3,356,754	+		CA264_14300	0.30	-3.7
3,356,780	+		CA264_14300	0.37	+0.2
3,356,812	-		CA264_14300	0.46	-0.6
3,356,827	-		CA264_14300	0.50	+0.8
3,356,864	-		CA264_14300	0.60	+2.4
3,356,913	+		CA264_14300	0.74	-3.0
3,357,006	+				-1.3
3,357,007	-				-2.1
3,357,007	-				-1.9
3,357,017	-				-1.4
3,357,062	+				-1.2
3,357,066	+				-2.2
3,357,088	+				+0.2
3,357,132	+				-0.3
3,357,133	-				+0.0
3,357,136	+				-0.9
3,357,136	+				-1.0
3,357,137	-				-0.4
3,357,137	-				+0.2
3,357,137	-				+2.1
3,357,137	-				-1.5
3,357,137	-				-0.5
3,357,138	+				+2.1
3,357,139	-				-0.5
3,357,139	-				+0.0
3,357,315	-				-0.4
3,357,315	-				-0.5
3,357,369	+				+0.3
3,357,370	-				-0.7
3,357,371	+				+0.9
3,357,371	+				-0.5
3,357,372	-				+0.8
3,357,372	-				-0.5
3,357,380	+				+0.2
3,357,380	+				+0.2
3,357,380	+				+0.3
3,357,381	-				-0.2
3,357,381	-				-0.5
3,357,432	-				+0.1
3,357,443	+		CA264_14305	0.10	-1.2
3,357,443	-		CA264_14305	0.10	-1.5
3,357,443	-		CA264_14305	0.10	-1.4
3,357,447	-		CA264_14305	0.10	+1.4
3,357,480	-		CA264_14305	0.11	-2.1
3,357,481	+		CA264_14305	0.11	-1.1
3,357,531	+		CA264_14305	0.13	-0.0
3,357,547	+		CA264_14305	0.13	-1.4
3,357,548	-		CA264_14305	0.13	-1.2
3,357,630	+		CA264_14305	0.15	-1.2
3,357,631	-		CA264_14305	0.15	+0.5
3,357,660	+		CA264_14305	0.16	+0.6
3,357,744	+		CA264_14305	0.18	-0.2
3,357,839	+		CA264_14305	0.21	-0.3
3,357,839	+		CA264_14305	0.21	-0.3
3,357,839	+		CA264_14305	0.21	+0.1
3,357,840	-		CA264_14305	0.21	+0.0
3,357,840	-		CA264_14305	0.21	-0.9
3,357,841	+		CA264_14305	0.21	+0.2
3,357,894	-		CA264_14305	0.23	-1.4
3,357,982	+		CA264_14305	0.25	-0.4
3,358,021	-		CA264_14305	0.26	-0.9
3,358,024	+		CA264_14305	0.26	+0.2
3,358,025	-		CA264_14305	0.26	-1.7
3,358,056	-		CA264_14305	0.27	-0.5
3,358,066	+		CA264_14305	0.27	+1.5
3,358,068	+		CA264_14305	0.27	-2.3
3,358,142	+		CA264_14305	0.29	+0.2
3,358,143	-		CA264_14305	0.29	-0.9
3,358,171	+		CA264_14305	0.30	+0.1
3,358,175	-		CA264_14305	0.30	-0.7
3,358,175	-		CA264_14305	0.30	-1.1
3,358,180	+		CA264_14305	0.30	+0.1
3,358,221	-		CA264_14305	0.32	+0.6
3,358,279	-		CA264_14305	0.33	-0.2
3,358,319	+		CA264_14305	0.34	-1.1
3,358,398	-		CA264_14305	0.36	-0.8
3,358,428	+		CA264_14305	0.37	+0.5
3,358,434	-		CA264_14305	0.37	-0.8
3,358,434	-		CA264_14305	0.37	+0.1
3,358,450	+		CA264_14305	0.38	-1.2
3,358,457	-		CA264_14305	0.38	-1.3
3,358,465	-		CA264_14305	0.38	+1.2
3,358,468	+		CA264_14305	0.38	-0.4
3,358,468	+		CA264_14305	0.38	-0.7
3,358,468	+		CA264_14305	0.38	-0.7
3,358,543	+		CA264_14305	0.40	+0.3
3,358,543	+		CA264_14305	0.40	-0.4
3,358,544	-		CA264_14305	0.40	-1.2
3,358,544	-		CA264_14305	0.40	-1.3
3,358,544	-		CA264_14305	0.40	-3.0
3,358,544	-		CA264_14305	0.40	-1.9
3,358,545	+		CA264_14305	0.40	-1.7
3,358,545	+		CA264_14305	0.40	-2.3
3,358,546	-		CA264_14305	0.40	-0.7
3,358,546	-		CA264_14305	0.40	-0.4
3,358,546	-		CA264_14305	0.40	+0.8
3,358,546	-		CA264_14305	0.40	-0.3
3,358,626	+		CA264_14305	0.43	-0.1
3,358,665	+		CA264_14305	0.44	-1.0
3,358,667	+		CA264_14305	0.44	-1.9
3,358,667	+		CA264_14305	0.44	-0.0
3,358,668	-		CA264_14305	0.44	-0.6
3,358,703	-		CA264_14305	0.45	-1.5
3,358,724	+		CA264_14305	0.45	-0.4
3,358,725	-		CA264_14305	0.45	+0.3
3,358,725	-		CA264_14305	0.45	+0.2
3,358,725	-		CA264_14305	0.45	-0.3
3,358,725	-		CA264_14305	0.45	-0.6
3,358,770	-		CA264_14305	0.47	-0.2
3,358,790	+		CA264_14305	0.47	+0.2
3,358,791	-		CA264_14305	0.47	+0.5
3,358,812	-		CA264_14305	0.48	-1.5
3,358,826	-		CA264_14305	0.48	-1.4
3,358,826	-		CA264_14305	0.48	-0.5
3,358,831	+		CA264_14305	0.48	-1.1
3,358,831	+		CA264_14305	0.48	-0.2
3,358,832	-		CA264_14305	0.48	-1.2
3,358,835	+		CA264_14305	0.48	-0.9
3,358,836	-		CA264_14305	0.48	-0.7
3,358,840	+		CA264_14305	0.49	-1.7
3,358,851	+		CA264_14305	0.49	+0.5
3,358,853	+		CA264_14305	0.49	+0.5
3,358,854	-		CA264_14305	0.49	-1.9
3,358,854	-		CA264_14305	0.49	+0.0
3,358,860	+		CA264_14305	0.49	-0.0
3,358,860	+		CA264_14305	0.49	-1.4
3,358,860	+		CA264_14305	0.49	+0.2
3,358,868	+		CA264_14305	0.49	-1.8
3,358,869	-		CA264_14305	0.49	+0.2
3,358,869	-		CA264_14305	0.49	-0.7
3,358,935	+		CA264_14305	0.51	+2.1
3,358,935	+		CA264_14305	0.51	+0.1
3,358,936	-		CA264_14305	0.51	-0.1
3,358,936	-		CA264_14305	0.51	+2.5
3,358,936	-		CA264_14305	0.51	-0.7
3,358,938	-		CA264_14305	0.51	+1.9
3,358,944	+		CA264_14305	0.51	-0.7
3,358,944	+		CA264_14305	0.51	-1.0
3,358,945	-		CA264_14305	0.51	+1.0
3,358,952	+		CA264_14305	0.52	+0.9
3,358,998	+		CA264_14305	0.53	-1.8
3,359,016	+		CA264_14305	0.53	-1.4
3,359,065	+		CA264_14305	0.55	-0.2
3,359,065	+		CA264_14305	0.55	-0.4
3,359,087	-		CA264_14305	0.55	-0.6
3,359,133	-		CA264_14305	0.57	-0.7
3,359,166	+		CA264_14305	0.58	+0.7
3,359,166	+		CA264_14305	0.58	+0.5
3,359,167	-		CA264_14305	0.58	-0.4
3,359,232	+		CA264_14305	0.59	-0.1
3,359,240	+		CA264_14305	0.60	-0.3
3,359,240	+		CA264_14305	0.60	-1.6
3,359,241	-		CA264_14305	0.60	-2.0
3,359,281	-		CA264_14305	0.61	+0.5
3,359,288	+		CA264_14305	0.61	-1.2
3,359,289	-		CA264_14305	0.61	-0.4
3,359,308	-		CA264_14305	0.61	-0.4
3,359,338	+		CA264_14305	0.62	-0.2
3,359,339	-		CA264_14305	0.62	-0.3
3,359,339	-		CA264_14305	0.62	-1.4
3,359,370	+		CA264_14305	0.63	-1.1
3,359,370	+		CA264_14305	0.63	+0.3
3,359,371	-		CA264_14305	0.63	+0.1
3,359,405	-		CA264_14305	0.64	-1.7
3,359,433	+		CA264_14305	0.65	-1.4
3,359,434	-		CA264_14305	0.65	-0.3
3,359,434	-		CA264_14305	0.65	-0.3
3,359,471	+		CA264_14305	0.66	-1.6
3,359,576	+		CA264_14305	0.69	-1.4
3,359,577	-		CA264_14305	0.69	+0.7
3,359,578	+		CA264_14305	0.69	-1.6
3,359,579	-		CA264_14305	0.69	-1.3
3,359,582	+		CA264_14305	0.69	-0.9
3,359,583	-		CA264_14305	0.69	-0.1
3,359,590	-		CA264_14305	0.69	+0.5
3,359,610	+		CA264_14305	0.70	+0.2
3,359,657	-		CA264_14305	0.71	+0.5
3,359,662	+		CA264_14305	0.71	-0.8
3,359,662	+		CA264_14305	0.71	+0.8
3,359,663	-		CA264_14305	0.71	-0.9
3,359,668	+		CA264_14305	0.71	-2.3
3,359,669	-		CA264_14305	0.71	-1.2
3,359,669	-		CA264_14305	0.71	-0.2
3,359,669	-		CA264_14305	0.71	-0.9
3,359,669	-		CA264_14305	0.71	-0.7
3,359,671	-		CA264_14305	0.71	-0.6
3,359,673	+		CA264_14305	0.72	-2.2
3,359,673	+		CA264_14305	0.72	-1.5
3,359,691	+		CA264_14305	0.72	-0.0
3,359,711	+		CA264_14305	0.73	+0.3
3,359,737	-		CA264_14305	0.73	-1.7
3,359,741	+		CA264_14305	0.73	-2.7
3,359,741	+		CA264_14305	0.73	-1.8
3,359,908	-		CA264_14305	0.78	-0.6
3,359,908	-		CA264_14305	0.78	-1.9
3,360,036	+		CA264_14305	0.82	-2.7
3,360,047	+		CA264_14305	0.82	-3.8
3,360,085	-		CA264_14305	0.83	-1.5
3,360,136	+		CA264_14305	0.84	-1.3
3,360,151	-		CA264_14305	0.85	-1.4
3,360,179	-		CA264_14305	0.85	+0.5
3,360,183	+		CA264_14305	0.86	-1.5
3,360,183	+		CA264_14305	0.86	-1.3
3,360,183	+		CA264_14305	0.86	-2.2
3,360,183	+		CA264_14305	0.86	-2.3
3,360,184	-		CA264_14305	0.86	+0.1
3,360,184	-		CA264_14305	0.86	+0.3
3,360,184	-		CA264_14305	0.86	+0.9
3,360,198	+		CA264_14305	0.86	-0.2
3,360,251	-		CA264_14305	0.87	-0.7
3,360,270	+		CA264_14305	0.88	-2.1
3,360,270	+		CA264_14305	0.88	-3.0
3,360,272	+		CA264_14305	0.88	-2.5
3,360,273	-		CA264_14305	0.88	-0.1
3,360,273	-		CA264_14305	0.88	+0.2
3,360,290	+		CA264_14305	0.88	-1.8
3,360,291	-		CA264_14305	0.89	-0.7
3,360,298	-		CA264_14305	0.89	-0.9
3,360,325	+		CA264_14305	0.89	-2.3
3,360,345	-				-0.9
3,360,380	+				-2.2
3,360,419	+				-2.5
3,360,424	+				-2.1
3,360,432	-				-0.3
3,360,453	+				-2.1
3,360,562	-				+0.1
3,360,580	+				-2.5
3,360,610	+				+0.2
3,360,610	+				-1.8
3,360,648	+				-1.5
3,360,661	+				-2.4
3,360,683	+				-2.4
3,360,683	+				-2.0
3,360,683	+				-2.4
3,360,683	+				-2.2
3,360,683	+				-2.8
3,360,684	-				+0.6
3,360,727	+				-2.4
3,360,735	+				-0.5
3,360,735	+				-0.4
3,360,736	-				+0.3
3,360,751	+				+0.0
3,360,751	+				-0.7
3,360,752	-				+0.0
3,360,831	+				-1.3
3,360,952	-		CA264_14310	0.29	-1.7
3,361,028	+		CA264_14310	0.46	-1.1
3,361,028	+		CA264_14310	0.46	-3.3
3,361,028	+		CA264_14310	0.46	-3.4
3,361,029	-		CA264_14310	0.47	-0.7
3,361,029	-		CA264_14310	0.47	-0.8
3,361,029	-		CA264_14310	0.47	-1.2
3,361,200	-		CA264_14310	0.86	-1.6
3,361,247	-				-0.7
3,361,260	+				-3.7
3,361,260	+				-2.3
3,361,261	-				-1.3
3,361,263	+				-3.1
3,361,264	-				-2.2
3,361,298	+				-2.7
3,361,304	+				-0.3
3,361,304	+				-2.8
3,361,348	+				-2.2
3,361,445	+				-0.4
3,361,445	+				-2.2
3,361,446	-				-1.7
3,361,446	-				-1.2
3,361,467	-				+0.3
3,361,572	+		CA264_14315	0.22	+0.5
3,361,572	+		CA264_14315	0.22	-0.3
3,361,572	+		CA264_14315	0.22	-0.4
3,361,659	-		CA264_14315	0.38	+1.0
3,361,665	+		CA264_14315	0.39	+0.6