Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_13535

Experiment: m.b. Cephalothin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.005 mg/ml
3,159,572	+		CA264_13530	0.35	-0.3
3,159,651	+		CA264_13530	0.44	+0.1
3,159,651	+		CA264_13530	0.44	+0.2
3,159,652	-		CA264_13530	0.44	+0.2
3,159,654	-		CA264_13530	0.44	-0.2
3,159,698	+		CA264_13530	0.49	-0.1
3,159,706	+		CA264_13530	0.49	-0.9
3,159,707	-		CA264_13530	0.50	+1.9
3,159,710	+		CA264_13530	0.50	-0.6
3,159,729	+		CA264_13530	0.52	-0.1
3,159,784	+		CA264_13530	0.58	+0.1
3,159,874	-		CA264_13530	0.68	+0.1
3,159,875	+		CA264_13530	0.68	-0.1
3,159,881	+		CA264_13530	0.68	-0.4
3,159,947	+		CA264_13530	0.75	-0.3
3,159,996	-		CA264_13530	0.81	-0.4
3,160,043	+		CA264_13530	0.86	-0.3
3,160,043	+		CA264_13530	0.86	-1.9
3,160,055	-		CA264_13530	0.87	+0.4
3,160,062	-		CA264_13530	0.88	+0.7
3,160,083	-				+0.1
3,160,136	+				-0.4
3,160,137	-				+1.3
3,160,158	+				+0.5
3,160,159	-				-0.2
3,160,160	+				-0.5
3,160,160	+				+0.0
3,160,161	-				-0.4
3,160,161	-				-0.3
3,160,191	-				+0.2
3,160,226	-				-0.1
3,160,322	+				-1.2
3,160,323	-				+0.7
3,160,323	-				+0.1
3,160,323	-				+0.6
3,160,324	+				-0.9
3,160,325	-				-0.1
3,160,414	-				+1.5
3,160,414	-				-0.5
3,160,444	+				+0.8
3,160,444	+				-0.2
3,160,444	+				-0.7
3,160,444	+				+0.4
3,160,444	+				-0.5
3,160,445	-				-0.7
3,160,445	-				+0.1
3,160,445	-				+0.1
3,160,448	+				-0.7
3,160,455	+				-0.8
3,160,510	+				+0.4
3,160,511	-				+0.2
3,160,511	-				+0.6
3,160,600	+		CA264_13535	0.12	-0.6
3,160,601	-		CA264_13535	0.12	+1.5
3,160,601	-		CA264_13535	0.12	-0.1
3,160,601	-		CA264_13535	0.12	+0.2
3,160,704	+		CA264_13535	0.22	-0.1
3,160,710	-		CA264_13535	0.22	+0.1
3,160,758	+		CA264_13535	0.27	+0.2
3,160,760	+		CA264_13535	0.27	-0.2
3,160,761	-		CA264_13535	0.27	-0.3
3,160,858	+		CA264_13535	0.36	+0.5
3,160,859	-				+2.7
3,160,859	-		CA264_13535	0.36	-0.4
3,160,942	+		CA264_13535	0.44	-0.2
3,161,033	+		CA264_13535	0.53	+0.1
3,161,040	+		CA264_13535	0.54	+0.3
3,161,041	-		CA264_13535	0.54	+0.2
3,161,041	-		CA264_13535	0.54	-0.1
3,161,041	-		CA264_13535	0.54	+0.3
3,161,077	+		CA264_13535	0.57	-0.8
3,161,392	-		CA264_13535	0.87	+1.2
3,161,392	-		CA264_13535	0.87	+1.2
3,161,392	-		CA264_13535	0.87	+0.0
3,161,436	-				-0.1
3,161,436	-				-0.0
3,161,500	-				-0.2
3,161,525	+				+0.3
3,161,565	+				+0.4
3,161,566	-				-0.1
3,161,591	-				+1.3
3,161,605	+				-0.0
3,161,605	+				-1.0
3,161,605	+				+0.2
3,161,605	+				+0.0
3,161,605	+				+1.0
3,161,605	+				+2.7
3,161,606	-				+0.6
3,161,606	-				-0.6
3,161,606	-				+0.6
3,161,610	+				-0.2
3,161,674	+		CA264_13540	0.16	-0.2
3,161,707	+		CA264_13540	0.24	-0.6
3,161,708	-		CA264_13540	0.25	+0.2
3,161,708	-		CA264_13540	0.25	+0.8
3,161,726	+		CA264_13540	0.29	+1.1
3,161,726	+		CA264_13540	0.29	+0.5
3,161,726	+		CA264_13540	0.29	+0.2
3,161,727	-		CA264_13540	0.30	+0.2
3,161,730	+		CA264_13540	0.30	-0.2
3,161,730	+		CA264_13540	0.30	+0.3
3,161,731	-		CA264_13540	0.31	-0.3
3,161,770	+		CA264_13540	0.41	+0.5
3,161,780	-		CA264_13540	0.43	-1.1
3,161,780	-		CA264_13540	0.43	+0.2
3,161,860	-		CA264_13540	0.64	-0.1
3,162,233	-				-0.5
3,162,233	-				-0.4
3,162,265	-				-0.9
3,162,265	-				+0.8
3,162,301	-				+0.9
3,162,319	+				-0.1
3,162,319	+				+0.1
3,162,319	+				-0.1
3,162,320	-				-0.3
3,162,320	-				+0.3
3,162,327	-				-0.4
3,162,405	+				-0.1
3,162,405	+				-0.3
3,162,405	+				-0.2
3,162,405	+				-0.5
3,162,421	+				-0.0
3,162,491	+		CA264_13545	0.14	+0.1
3,162,497	+		CA264_13545	0.15	+0.6
3,162,498	-		CA264_13545	0.15	-1.0
3,162,498	-		CA264_13545	0.15	+0.3
3,162,498	-		CA264_13545	0.15	-0.4