Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07860

Experiment: m.b. Cephalothin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.005 mg/ml
1,819,199	-				-0.8
1,819,232	+				-1.2
1,819,295	-		CA264_07855	0.10	-0.4
1,819,319	-		CA264_07855	0.13	+0.2
1,819,321	+		CA264_07855	0.13	+0.9
1,819,322	-		CA264_07855	0.13	-0.2
1,819,329	+		CA264_07855	0.14	-0.9
1,819,329	+		CA264_07855	0.14	-0.7
1,819,330	-		CA264_07855	0.14	-0.4
1,819,330	-		CA264_07855	0.14	-0.2
1,819,330	-		CA264_07855	0.14	-1.7
1,819,330	-		CA264_07855	0.14	-0.2
1,819,332	+		CA264_07855	0.14	+0.3
1,819,333	-		CA264_07855	0.14	-1.1
1,819,374	+		CA264_07855	0.19	-0.3
1,819,374	+		CA264_07855	0.19	+0.7
1,819,374	+		CA264_07855	0.19	-0.4
1,819,375	-		CA264_07855	0.19	-0.3
1,819,405	-		CA264_07855	0.22	-1.0
1,819,405	-		CA264_07855	0.22	+0.8
1,819,419	+		CA264_07855	0.24	-0.3
1,819,419	+		CA264_07855	0.24	+0.0
1,819,573	-		CA264_07855	0.41	-1.0
1,819,713	-		CA264_07855	0.56	+0.5
1,819,817	+		CA264_07855	0.68	-1.3
1,819,817	+		CA264_07855	0.68	+0.0
1,819,818	-		CA264_07855	0.68	-0.2
1,819,898	+		CA264_07855	0.77	+0.3
1,819,898	+		CA264_07855	0.77	-0.2
1,819,899	-		CA264_07855	0.77	-0.2
1,819,899	-		CA264_07855	0.77	+1.1
1,820,031	+				-0.4
1,820,032	-				+0.6
1,820,063	-				-1.8
1,820,152	-				-0.1
1,820,153	+				-0.2
1,820,161	-				+0.0
1,820,166	+				-1.1
1,820,189	-				-0.3
1,820,281	-		CA264_07860	0.12	+0.7
1,820,343	+		CA264_07860	0.20	-0.7
1,820,344	-		CA264_07860	0.20	+0.3
1,820,344	-		CA264_07860	0.20	-0.6
1,820,353	+		CA264_07860	0.22	-0.2
1,820,354	-		CA264_07860	0.22	+0.7
1,820,354	-		CA264_07860	0.22	-0.7
1,820,356	-		CA264_07860	0.22	-0.4
1,820,418	+		CA264_07860	0.31	-0.2
1,820,419	-		CA264_07860	0.31	+1.1
1,820,424	+		CA264_07860	0.32	-0.1
1,820,424	+		CA264_07860	0.32	-1.3
1,820,424	+		CA264_07860	0.32	+0.7
1,820,424	+		CA264_07860	0.32	-0.4
1,820,424	+		CA264_07860	0.32	-0.0
1,820,425	-		CA264_07860	0.32	-1.2
1,820,429	+		CA264_07860	0.32	-1.1
1,820,429	+		CA264_07860	0.32	+1.5
1,820,429	+		CA264_07860	0.32	-0.8
1,820,430	-		CA264_07860	0.32	+0.6
1,820,554	+		CA264_07860	0.50	+0.3
1,820,714	+		CA264_07860	0.72	-0.2
1,820,908	-				-0.9
1,820,966	+				-1.6
1,820,970	+				+0.9
1,820,970	+				-0.3
1,820,970	+				-0.8
1,820,972	+				-0.9
1,820,973	-				-0.4
1,821,004	-				-0.8
1,821,040	-				-0.4
1,821,048	+				+0.9
1,821,053	+				-0.1
1,821,053	+				+0.9
1,821,054	-				-0.8
1,821,055	+				-0.7
1,821,057	+				-2.0
1,821,078	+				-0.3
1,821,082	+				-0.4
1,821,121	-				-0.3
1,821,122	+				-1.5
1,821,122	+				-0.5
1,821,162	+				-0.3
1,821,162	+				-0.5
1,821,163	-				-0.6
1,821,261	-		CA264_07865	0.23	-1.1
1,821,262	+		CA264_07865	0.23	-0.1
1,821,263	-		CA264_07865	0.23	-0.8
1,821,263	-		CA264_07865	0.23	-0.1
1,821,313	-		CA264_07865	0.33	+0.5
1,821,313	-		CA264_07865	0.33	-0.3
1,821,316	+		CA264_07865	0.33	+0.5
1,821,317	-		CA264_07865	0.34	-0.6
1,821,317	-		CA264_07865	0.34	-0.8
1,821,317	-		CA264_07865	0.34	-0.1
1,821,356	+		CA264_07865	0.41	+0.7
1,821,383	+		CA264_07865	0.46	+0.9
1,821,417	+		CA264_07865	0.52	-0.1
1,821,417	+		CA264_07865	0.52	-0.8
1,821,419	+		CA264_07865	0.53	+0.1
1,821,420	-		CA264_07865	0.53	+0.5
1,821,454	-		CA264_07865	0.59	+0.6
1,821,464	-		CA264_07865	0.61	-0.3
1,821,567	+		CA264_07865	0.80	-0.4
1,821,567	+		CA264_07865	0.80	-0.4
1,821,568	-		CA264_07865	0.81	-0.4
1,821,568	-		CA264_07865	0.81	-0.2
1,821,669	+				-0.3
1,821,669	+				+0.8
1,821,695	-				-1.3
1,821,717	+				-0.7
1,821,724	+				+0.0
1,821,756	-				-0.9
1,821,756	-				+0.7
1,821,767	+				+0.2
1,821,835	-				+0.3
1,821,883	-				-0.3