Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_05890

Experiment: m.b. Cephalothin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.005 mg/ml
1,369,651	-		CA264_05880	0.49	+0.2
1,369,651	-		CA264_05880	0.49	+0.4
1,369,800	+		CA264_05880	0.66	+0.4
1,369,801	-		CA264_05880	0.67	-0.9
1,369,801	-		CA264_05880	0.67	-0.1
1,369,864	+		CA264_05880	0.74	+0.1
1,369,865	-		CA264_05880	0.74	-0.1
1,369,938	+		CA264_05880	0.82	-0.1
1,369,998	+		CA264_05880	0.89	-0.6
1,370,003	+		CA264_05880	0.90	+1.2
1,370,040	-				+0.2
1,370,071	-				+0.3
1,370,094	-				-0.1
1,370,094	-				-0.5
1,370,099	+				+0.5
1,370,100	-				+0.5
1,370,106	+				-0.2
1,370,114	-				+0.9
1,370,168	+				-0.5
1,370,169	-				-0.8
1,370,169	-				-0.1
1,370,177	+				-0.6
1,370,180	+				+0.6
1,370,181	-				-0.1
1,370,181	-				-0.3
1,370,194	+				+0.3
1,370,194	+				+0.1
1,370,223	+				-1.2
1,370,223	+				+0.5
1,370,262	+		CA264_05885	0.14	-0.3
1,370,267	-		CA264_05885	0.15	-0.0
1,370,348	+		CA264_05885	0.34	-0.0
1,370,348	+		CA264_05885	0.34	+0.4
1,370,349	-		CA264_05885	0.34	+0.8
1,370,349	-		CA264_05885	0.34	-0.5
1,370,514	+		CA264_05885	0.72	-0.1
1,370,515	-		CA264_05885	0.72	+1.5
1,370,516	+		CA264_05885	0.72	+1.1
1,370,544	+		CA264_05885	0.79	+0.5
1,370,544	+		CA264_05885	0.79	+0.3
1,370,544	+		CA264_05885	0.79	+1.0
1,370,544	+		CA264_05885	0.79	+1.3
1,370,545	-		CA264_05885	0.79	+0.9
1,370,546	+		CA264_05885	0.79	+0.1
1,370,546	+		CA264_05885	0.79	+0.5
1,370,547	-		CA264_05885	0.80	-1.2
1,370,547	-		CA264_05885	0.80	+0.5
1,370,547	-		CA264_05885	0.80	-1.6
1,370,587	-		CA264_05885	0.89	+0.4
1,370,887	+		CA264_05890	0.16	+1.4
1,370,888	-		CA264_05890	0.16	-0.4
1,370,888	-		CA264_05890	0.16	+1.4
1,370,934	+		CA264_05890	0.20	+0.4
1,370,948	-		CA264_05890	0.20	+0.9
1,370,963	-		CA264_05890	0.22	-0.2
1,370,963	-		CA264_05890	0.22	-1.3
1,371,035	-		CA264_05890	0.26	+0.3
1,371,035	-		CA264_05890	0.26	-0.0
1,371,088	+		CA264_05890	0.30	+0.5
1,371,089	-		CA264_05890	0.30	+1.4
1,371,103	-		CA264_05890	0.31	-0.2
1,371,145	+		CA264_05890	0.34	-0.1
1,371,148	+		CA264_05890	0.34	+1.1
1,371,162	+		CA264_05890	0.35	+0.2
1,371,163	-		CA264_05890	0.35	+0.3
1,371,198	-		CA264_05890	0.38	-0.8
1,371,217	+		CA264_05890	0.39	+0.0
1,371,218	-		CA264_05890	0.39	+0.4
1,371,218	-		CA264_05890	0.39	-0.1
1,371,246	+		CA264_05890	0.41	+0.9
1,371,247	-		CA264_05890	0.41	-1.8
1,371,249	+		CA264_05890	0.41	+0.5
1,371,250	-		CA264_05890	0.41	+0.2
1,371,356	+		CA264_05890	0.49	+0.8
1,371,361	+		CA264_05890	0.49	+0.1
1,371,386	+		CA264_05890	0.51	+0.3
1,371,431	+		CA264_05890	0.54	+0.6
1,371,431	+		CA264_05890	0.54	+0.4
1,371,434	+		CA264_05890	0.54	+1.3
1,371,434	+		CA264_05890	0.54	+0.5
1,371,435	-		CA264_05890	0.54	+0.5
1,371,435	-		CA264_05890	0.54	-1.5
1,371,450	+		CA264_05890	0.55	-0.5
1,371,453	-		CA264_05890	0.55	+0.5
1,371,530	-		CA264_05890	0.60	+0.2
1,371,725	+		CA264_05890	0.74	+0.6
1,371,974	+				-0.0
1,371,975	-				-0.2
1,371,975	-				+1.0
1,371,998	+				+1.7
1,372,097	+				+0.6
1,372,097	+				+0.7
1,372,097	+				-1.3
1,372,098	-				-0.1
1,372,098	-				+0.6
1,372,107	-				+1.8
1,372,114	-				-0.1
1,372,162	-				+1.0
1,372,184	-				+0.4
1,372,214	-				-1.2
1,372,214	-				-0.5
1,372,214	-				-0.2
1,372,214	-				-0.0
1,372,217	+				+0.4
1,372,217	+				+1.0
1,372,218	-				-0.2
1,372,218	-				-0.7
1,372,335	-		CA264_05895	0.17	-0.9
1,372,335	-		CA264_05895	0.17	-0.5
1,372,335	-		CA264_05895	0.17	-0.6
1,372,337	+		CA264_05895	0.17	+0.3
1,372,344	+		CA264_05895	0.18	+0.2
1,372,545	+		CA264_05895	0.42	-0.6
1,372,817	+		CA264_05895	0.75	+1.5
1,372,833	+		CA264_05895	0.77	+0.1
1,372,875	+		CA264_05895	0.82	+0.7
1,372,876	-		CA264_05895	0.82	+0.1
1,372,876	-		CA264_05895	0.82	-1.2
1,372,876	-		CA264_05895	0.82	-0.2
1,372,877	+		CA264_05895	0.82	+1.4
1,372,878	-		CA264_05895	0.82	+0.2
1,372,983	+				+0.5
1,372,983	+				-0.3
1,372,985	+				+0.7
1,372,986	-				+0.2
1,372,986	-				-0.2
1,373,074	+				-0.6
1,373,077	-				+0.4