Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04860 and CA264_04865 are separated by 135 nucleotides CA264_04865 and CA264_04870 are separated by 98 nucleotides
CA264_04860: CA264_04860 - tRNA-Met, at 1,128,788 to 1,128,864
_04860
CA264_04865: CA264_04865 - ATPase, at 1,129,000 to 1,129,404
_04865
CA264_04870: CA264_04870 - permease, at 1,129,503 to 1,130,915
_04870
Position (kb)
1128
1129
1130 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1128.150 kb on + strand at 1128.187 kb on + strand at 1128.249 kb on - strand at 1128.258 kb on - strand at 1128.261 kb on - strand at 1128.265 kb on - strand at 1128.320 kb on + strand at 1128.320 kb on + strand at 1128.333 kb on + strand at 1128.333 kb on + strand at 1128.333 kb on + strand at 1128.333 kb on + strand at 1128.370 kb on + strand at 1128.394 kb on - strand at 1128.443 kb on + strand at 1128.443 kb on + strand at 1128.444 kb on - strand at 1128.444 kb on - strand at 1128.457 kb on + strand at 1128.458 kb on - strand at 1128.473 kb on + strand at 1128.474 kb on - strand at 1128.506 kb on + strand at 1128.507 kb on - strand at 1128.561 kb on + strand at 1128.562 kb on - strand at 1128.562 kb on - strand at 1128.565 kb on + strand at 1128.565 kb on + strand at 1128.566 kb on - strand at 1128.566 kb on - strand at 1128.569 kb on + strand at 1128.569 kb on + strand at 1128.570 kb on - strand at 1128.582 kb on + strand at 1128.606 kb on - strand at 1128.944 kb on + strand at 1128.963 kb on + strand at 1128.971 kb on + strand at 1128.976 kb on - strand at 1128.987 kb on + strand at 1128.996 kb on + strand at 1129.011 kb on + strand at 1129.012 kb on - strand at 1129.041 kb on + strand, within CA264_04865 at 1129.041 kb on + strand, within CA264_04865 at 1129.042 kb on - strand, within CA264_04865 at 1129.073 kb on - strand, within CA264_04865 at 1129.077 kb on - strand, within CA264_04865 at 1129.077 kb on - strand, within CA264_04865 at 1129.124 kb on + strand, within CA264_04865 at 1129.124 kb on + strand, within CA264_04865 at 1129.259 kb on - strand, within CA264_04865 at 1129.322 kb on - strand, within CA264_04865 at 1129.391 kb on + strand at 1129.420 kb on - strand at 1129.420 kb on - strand at 1129.428 kb on - strand at 1129.454 kb on + strand at 1129.463 kb on - strand at 1129.477 kb on - strand at 1129.495 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 1,128,150 + -1.2 1,128,187 + +0.3 1,128,249 - +0.1 1,128,258 - +1.5 1,128,261 - +0.4 1,128,265 - +0.9 1,128,320 + -0.6 1,128,320 + +0.1 1,128,333 + +0.4 1,128,333 + -0.7 1,128,333 + -0.1 1,128,333 + -0.6 1,128,370 + -0.7 1,128,394 - -0.2 1,128,443 + -1.4 1,128,443 + +0.2 1,128,444 - +0.3 1,128,444 - -0.3 1,128,457 + +0.4 1,128,458 - -1.1 1,128,473 + +1.8 1,128,474 - -0.3 1,128,506 + +0.2 1,128,507 - -0.1 1,128,561 + +1.3 1,128,562 - -0.1 1,128,562 - -0.2 1,128,565 + +1.1 1,128,565 + +0.3 1,128,566 - +1.2 1,128,566 - +1.1 1,128,569 + +0.3 1,128,569 + -1.0 1,128,570 - -1.6 1,128,582 + +1.6 1,128,606 - +0.1 1,128,944 + +0.7 1,128,963 + -0.1 1,128,971 + +0.4 1,128,976 - -0.4 1,128,987 + +0.1 1,128,996 + -0.1 1,129,011 + +0.9 1,129,012 - -0.2 1,129,041 + CA264_04865 0.10 -3.0 1,129,041 + CA264_04865 0.10 -0.4 1,129,042 - CA264_04865 0.10 +0.2 1,129,073 - CA264_04865 0.18 -0.2 1,129,077 - CA264_04865 0.19 +0.2 1,129,077 - CA264_04865 0.19 +0.6 1,129,124 + CA264_04865 0.31 -0.5 1,129,124 + CA264_04865 0.31 +1.2 1,129,259 - CA264_04865 0.64 +0.2 1,129,322 - CA264_04865 0.80 +1.2 1,129,391 + -1.2 1,129,420 - +0.1 1,129,420 - -0.4 1,129,428 - -0.3 1,129,454 + +1.5 1,129,463 - +0.1 1,129,477 - +1.1 1,129,495 + +0.3
Or see this region's nucleotide sequence