Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03110 and CA264_03115 are separated by 68 nucleotides CA264_03115 and CA264_03120 are separated by 152 nucleotides CA264_03120 and CA264_03125 are separated by 249 nucleotides
CA264_03110: CA264_03110 - transporter, at 726,455 to 727,366
_03110
CA264_03115: CA264_03115 - hypothetical protein, at 727,435 to 728,061
_03115
CA264_03120: CA264_03120 - protoporphyrinogen IX oxidase, at 728,214 to 728,750
_03120
CA264_03125: CA264_03125 - oxygen-independent coproporphyrinogen III oxidase, at 729,000 to 730,376
_03125
Position (kb) 727
728
729 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 726.467 kb on - strand at 726.468 kb on + strand at 726.557 kb on - strand, within CA264_03110 at 726.560 kb on - strand, within CA264_03110 at 726.560 kb on - strand, within CA264_03110 at 726.563 kb on + strand, within CA264_03110 at 726.563 kb on + strand, within CA264_03110 at 726.563 kb on + strand, within CA264_03110 at 726.564 kb on - strand, within CA264_03110 at 726.564 kb on - strand, within CA264_03110 at 726.564 kb on - strand, within CA264_03110 at 726.564 kb on - strand, within CA264_03110 at 726.590 kb on + strand, within CA264_03110 at 726.590 kb on + strand, within CA264_03110 at 726.591 kb on - strand, within CA264_03110 at 726.730 kb on + strand, within CA264_03110 at 726.733 kb on - strand, within CA264_03110 at 726.736 kb on + strand, within CA264_03110 at 726.736 kb on + strand, within CA264_03110 at 726.845 kb on - strand, within CA264_03110 at 726.857 kb on - strand, within CA264_03110 at 726.982 kb on + strand, within CA264_03110 at 726.982 kb on + strand, within CA264_03110 at 726.982 kb on + strand, within CA264_03110 at 727.212 kb on + strand, within CA264_03110 at 727.216 kb on - strand, within CA264_03110 at 727.265 kb on + strand, within CA264_03110 at 727.272 kb on + strand, within CA264_03110 at 727.344 kb on - strand at 727.364 kb on + strand at 727.377 kb on + strand at 727.377 kb on + strand at 727.391 kb on - strand at 727.393 kb on - strand at 727.446 kb on - strand at 727.478 kb on + strand at 727.479 kb on - strand at 727.669 kb on + strand, within CA264_03115 at 727.670 kb on - strand, within CA264_03115 at 727.670 kb on - strand, within CA264_03115 at 727.670 kb on - strand, within CA264_03115 at 727.673 kb on + strand, within CA264_03115 at 727.673 kb on + strand, within CA264_03115 at 727.674 kb on - strand, within CA264_03115 at 728.061 kb on + strand at 728.062 kb on - strand at 728.082 kb on - strand at 728.733 kb on + strand at 728.750 kb on + strand at 728.775 kb on - strand at 728.882 kb on - strand at 728.882 kb on - strand at 729.029 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 726,467 - -0.5 726,468 + -0.1 726,557 - CA264_03110 0.11 +0.3 726,560 - CA264_03110 0.12 +0.5 726,560 - CA264_03110 0.12 +0.8 726,563 + CA264_03110 0.12 -0.4 726,563 + CA264_03110 0.12 -1.0 726,563 + CA264_03110 0.12 +1.0 726,564 - CA264_03110 0.12 +0.4 726,564 - CA264_03110 0.12 -2.3 726,564 - CA264_03110 0.12 +0.6 726,564 - CA264_03110 0.12 +0.9 726,590 + CA264_03110 0.15 +0.6 726,590 + CA264_03110 0.15 -0.8 726,591 - CA264_03110 0.15 +1.6 726,730 + CA264_03110 0.30 -1.6 726,733 - CA264_03110 0.30 -1.3 726,736 + CA264_03110 0.31 -0.1 726,736 + CA264_03110 0.31 -0.1 726,845 - CA264_03110 0.43 -0.5 726,857 - CA264_03110 0.44 -1.2 726,982 + CA264_03110 0.58 +0.2 726,982 + CA264_03110 0.58 -1.0 726,982 + CA264_03110 0.58 -0.0 727,212 + CA264_03110 0.83 +0.2 727,216 - CA264_03110 0.83 -0.8 727,265 + CA264_03110 0.89 +0.3 727,272 + CA264_03110 0.90 +0.5 727,344 - -0.7 727,364 + +0.9 727,377 + +1.8 727,377 + -0.4 727,391 - +0.4 727,393 - -0.4 727,446 - +0.2 727,478 + +0.1 727,479 - -0.0 727,669 + CA264_03115 0.37 +1.6 727,670 - CA264_03115 0.37 +0.4 727,670 - CA264_03115 0.37 +0.6 727,670 - CA264_03115 0.37 +0.8 727,673 + CA264_03115 0.38 -0.1 727,673 + CA264_03115 0.38 -0.2 727,674 - CA264_03115 0.38 -0.3 728,061 + -3.2 728,062 - -0.9 728,082 - +0.9 728,733 + -0.4 728,750 + +2.3 728,775 - +0.6 728,882 - +1.0 728,882 - -0.9 729,029 + +0.3
Or see this region's nucleotide sequence