Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02430 and CA264_02435 are separated by 338 nucleotides CA264_02435 and CA264_02440 are separated by 186 nucleotides
CA264_02430: CA264_02430 - glucoamylase, at 565,986 to 567,818
_02430
CA264_02435: CA264_02435 - hypothetical protein, at 568,157 to 568,807
_02435
CA264_02440: CA264_02440 - vitamin K epoxide reductase, at 568,994 to 570,556
_02440
Position (kb) 568
569 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 567.195 kb on - strand, within CA264_02430 at 567.220 kb on + strand, within CA264_02430 at 567.220 kb on + strand, within CA264_02430 at 567.221 kb on - strand, within CA264_02430 at 567.221 kb on - strand, within CA264_02430 at 567.221 kb on - strand, within CA264_02430 at 567.614 kb on - strand, within CA264_02430 at 567.623 kb on + strand, within CA264_02430 at 567.625 kb on + strand, within CA264_02430 at 567.767 kb on + strand at 567.767 kb on + strand at 567.791 kb on - strand at 567.809 kb on - strand at 567.809 kb on - strand at 567.821 kb on + strand at 567.823 kb on + strand at 567.868 kb on + strand at 567.869 kb on - strand at 568.067 kb on + strand at 568.075 kb on + strand at 568.076 kb on - strand at 568.148 kb on + strand at 568.200 kb on + strand at 568.204 kb on - strand at 568.378 kb on + strand, within CA264_02435 at 568.391 kb on - strand, within CA264_02435 at 568.484 kb on + strand, within CA264_02435 at 568.484 kb on + strand, within CA264_02435 at 568.486 kb on + strand, within CA264_02435 at 568.486 kb on + strand, within CA264_02435 at 568.486 kb on + strand, within CA264_02435 at 568.487 kb on - strand, within CA264_02435 at 568.543 kb on + strand, within CA264_02435 at 568.590 kb on + strand, within CA264_02435 at 568.631 kb on + strand, within CA264_02435 at 568.638 kb on - strand, within CA264_02435 at 568.755 kb on - strand at 568.790 kb on + strand at 568.790 kb on + strand at 568.799 kb on - strand at 568.807 kb on + strand at 568.807 kb on + strand at 568.807 kb on + strand at 568.807 kb on + strand at 568.807 kb on + strand at 568.807 kb on + strand at 568.807 kb on + strand at 568.807 kb on + strand at 568.807 kb on + strand at 568.808 kb on - strand at 568.808 kb on - strand at 568.808 kb on - strand at 568.810 kb on + strand at 568.811 kb on - strand at 568.844 kb on + strand at 568.888 kb on + strand at 568.889 kb on - strand at 568.889 kb on - strand at 568.895 kb on + strand at 568.944 kb on + strand at 568.944 kb on + strand at 568.945 kb on - strand at 568.947 kb on - strand at 568.953 kb on - strand at 568.953 kb on - strand at 568.962 kb on - strand at 568.990 kb on - strand at 568.990 kb on - strand at 568.990 kb on - strand at 569.053 kb on + strand at 569.074 kb on + strand at 569.075 kb on - strand at 569.140 kb on + strand at 569.310 kb on + strand, within CA264_02440 at 569.529 kb on + strand, within CA264_02440 at 569.615 kb on + strand, within CA264_02440 at 569.615 kb on + strand, within CA264_02440 at 569.616 kb on - strand, within CA264_02440 at 569.711 kb on + strand, within CA264_02440
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 567,195 - CA264_02430 0.66 +0.1 567,220 + CA264_02430 0.67 +1.5 567,220 + CA264_02430 0.67 +0.5 567,221 - CA264_02430 0.67 +0.0 567,221 - CA264_02430 0.67 -0.2 567,221 - CA264_02430 0.67 -0.4 567,614 - CA264_02430 0.89 +0.6 567,623 + CA264_02430 0.89 +0.5 567,625 + CA264_02430 0.89 -0.5 567,767 + -0.4 567,767 + -0.5 567,791 - -1.1 567,809 - -0.4 567,809 - +1.7 567,821 + +0.3 567,823 + +0.3 567,868 + +0.3 567,869 - -0.1 568,067 + -0.8 568,075 + -0.7 568,076 - +0.8 568,148 + +0.3 568,200 + -0.4 568,204 - -0.4 568,378 + CA264_02435 0.34 -0.1 568,391 - CA264_02435 0.36 +0.2 568,484 + CA264_02435 0.50 +0.0 568,484 + CA264_02435 0.50 -0.2 568,486 + CA264_02435 0.51 -1.5 568,486 + CA264_02435 0.51 -0.8 568,486 + CA264_02435 0.51 -2.5 568,487 - CA264_02435 0.51 -0.4 568,543 + CA264_02435 0.59 -0.7 568,590 + CA264_02435 0.67 -1.4 568,631 + CA264_02435 0.73 -0.6 568,638 - CA264_02435 0.74 -0.8 568,755 - -0.6 568,790 + -0.9 568,790 + -1.1 568,799 - -0.6 568,807 + -1.1 568,807 + -1.9 568,807 + -1.9 568,807 + +0.8 568,807 + +0.0 568,807 + -2.1 568,807 + -0.6 568,807 + -2.0 568,807 + -1.3 568,808 - +2.3 568,808 - -0.8 568,808 - -0.6 568,810 + -2.8 568,811 - -1.0 568,844 + -1.3 568,888 + -0.8 568,889 - -0.9 568,889 - -0.4 568,895 + -0.8 568,944 + -1.6 568,944 + -1.2 568,945 - -0.1 568,947 - -0.2 568,953 - +0.4 568,953 - -0.4 568,962 - -1.3 568,990 - -0.6 568,990 - +0.1 568,990 - -1.1 569,053 + +0.6 569,074 + +0.2 569,075 - +0.1 569,140 + +1.6 569,310 + CA264_02440 0.20 +0.3 569,529 + CA264_02440 0.34 -0.4 569,615 + CA264_02440 0.40 +0.3 569,615 + CA264_02440 0.40 -0.5 569,616 - CA264_02440 0.40 -1.1 569,711 + CA264_02440 0.46 -2.7
Or see this region's nucleotide sequence