Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01730 and CA264_01735 are separated by 206 nucleotides CA264_01735 and CA264_01740 are separated by 0 nucleotides
CA264_01730: CA264_01730 - NADH-quinone oxidoreductase subunit L, at 403,012 to 405,156
_01730
CA264_01735: CA264_01735 - oxidoreductase, at 405,363 to 407,105
_01735
CA264_01740: CA264_01740 - proton-translocating NADH-quinone oxidoreductase subunit N, at 407,106 to 408,611
_01740
Position (kb) 405
406
407
408 Strain fitness (log2 ratio) -2
-1
0
1
2 at 404.369 kb on - strand, within CA264_01730 at 404.370 kb on + strand, within CA264_01730 at 404.371 kb on - strand, within CA264_01730 at 404.470 kb on - strand, within CA264_01730 at 404.483 kb on + strand, within CA264_01730 at 404.615 kb on + strand, within CA264_01730 at 404.615 kb on + strand, within CA264_01730 at 404.616 kb on - strand, within CA264_01730 at 404.630 kb on + strand, within CA264_01730 at 404.630 kb on + strand, within CA264_01730 at 404.643 kb on + strand, within CA264_01730 at 404.728 kb on - strand, within CA264_01730 at 404.732 kb on + strand, within CA264_01730 at 404.772 kb on + strand, within CA264_01730 at 404.796 kb on - strand, within CA264_01730 at 404.822 kb on + strand, within CA264_01730 at 404.970 kb on - strand at 405.137 kb on + strand at 405.139 kb on + strand at 405.141 kb on + strand at 405.141 kb on + strand at 405.142 kb on - strand at 405.142 kb on - strand at 405.142 kb on - strand at 405.160 kb on + strand at 405.214 kb on - strand at 405.216 kb on + strand at 405.217 kb on - strand at 405.217 kb on - strand at 405.228 kb on + strand at 405.228 kb on + strand at 405.245 kb on + strand at 405.246 kb on - strand at 405.246 kb on - strand at 405.264 kb on + strand at 405.264 kb on + strand at 405.264 kb on + strand at 405.289 kb on - strand at 405.329 kb on + strand at 405.329 kb on + strand at 405.508 kb on - strand at 405.572 kb on - strand, within CA264_01735 at 405.741 kb on + strand, within CA264_01735 at 405.741 kb on + strand, within CA264_01735 at 405.785 kb on - strand, within CA264_01735 at 405.845 kb on - strand, within CA264_01735 at 405.845 kb on - strand, within CA264_01735 at 405.885 kb on - strand, within CA264_01735 at 405.893 kb on + strand, within CA264_01735 at 405.900 kb on - strand, within CA264_01735 at 406.736 kb on + strand, within CA264_01735 at 406.849 kb on - strand, within CA264_01735 at 406.855 kb on + strand, within CA264_01735 at 407.020 kb on + strand at 407.099 kb on - strand at 407.124 kb on + strand at 407.591 kb on + strand, within CA264_01740 at 407.629 kb on - strand, within CA264_01740 at 408.082 kb on + strand, within CA264_01740
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 404,369 - CA264_01730 0.63 -1.0 404,370 + CA264_01730 0.63 -2.7 404,371 - CA264_01730 0.63 -2.1 404,470 - CA264_01730 0.68 -2.5 404,483 + CA264_01730 0.69 -1.0 404,615 + CA264_01730 0.75 -0.5 404,615 + CA264_01730 0.75 -0.4 404,616 - CA264_01730 0.75 -1.6 404,630 + CA264_01730 0.75 -1.1 404,630 + CA264_01730 0.75 -1.2 404,643 + CA264_01730 0.76 -0.8 404,728 - CA264_01730 0.80 -0.4 404,732 + CA264_01730 0.80 -1.3 404,772 + CA264_01730 0.82 -1.6 404,796 - CA264_01730 0.83 -1.0 404,822 + CA264_01730 0.84 -1.9 404,970 - -0.8 405,137 + +0.6 405,139 + -1.2 405,141 + +1.8 405,141 + -0.9 405,142 - -0.4 405,142 - -1.0 405,142 - -1.4 405,160 + -0.4 405,214 - +0.0 405,216 + -0.9 405,217 - -0.6 405,217 - -0.5 405,228 + +1.2 405,228 + +0.3 405,245 + -1.2 405,246 - +0.9 405,246 - +0.4 405,264 + +1.2 405,264 + +0.5 405,264 + +0.7 405,289 - -0.1 405,329 + -0.7 405,329 + +0.3 405,508 - -2.3 405,572 - CA264_01735 0.12 -1.7 405,741 + CA264_01735 0.22 -2.3 405,741 + CA264_01735 0.22 +1.2 405,785 - CA264_01735 0.24 -1.2 405,845 - CA264_01735 0.28 -1.3 405,845 - CA264_01735 0.28 -0.7 405,885 - CA264_01735 0.30 -2.6 405,893 + CA264_01735 0.30 -2.4 405,900 - CA264_01735 0.31 -1.9 406,736 + CA264_01735 0.79 -1.7 406,849 - CA264_01735 0.85 -1.8 406,855 + CA264_01735 0.86 -2.1 407,020 + -0.5 407,099 - -0.5 407,124 + -1.7 407,591 + CA264_01740 0.32 +1.2 407,629 - CA264_01740 0.35 -1.5 408,082 + CA264_01740 0.65 -0.9
Or see this region's nucleotide sequence