Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00410 and CA264_00415 are separated by 99 nucleotides CA264_00415 and CA264_00420 are separated by 77 nucleotides
CA264_00410: CA264_00410 - enoyl-CoA hydratase, at 89,327 to 90,100
_00410
CA264_00415: CA264_00415 - aspartate kinase, at 90,200 to 91,474
_00415
CA264_00420: CA264_00420 - fructose-bisphosphatase class I, at 91,552 to 92,559
_00420
Position (kb) 90
91
92 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 89.224 kb on + strand at 89.229 kb on + strand at 89.230 kb on - strand at 89.263 kb on + strand at 89.263 kb on + strand at 89.264 kb on - strand at 89.265 kb on + strand at 89.288 kb on + strand at 89.289 kb on - strand at 89.309 kb on + strand at 89.310 kb on - strand at 89.321 kb on - strand at 89.410 kb on - strand, within CA264_00410 at 89.547 kb on + strand, within CA264_00410 at 89.547 kb on + strand, within CA264_00410 at 89.609 kb on - strand, within CA264_00410 at 89.609 kb on - strand, within CA264_00410 at 89.705 kb on - strand, within CA264_00410 at 89.705 kb on - strand, within CA264_00410 at 89.705 kb on - strand, within CA264_00410 at 89.705 kb on - strand, within CA264_00410 at 89.821 kb on + strand, within CA264_00410 at 89.821 kb on + strand, within CA264_00410 at 89.822 kb on - strand, within CA264_00410 at 90.089 kb on + strand at 90.090 kb on - strand at 90.103 kb on + strand at 90.104 kb on - strand at 90.104 kb on - strand at 90.104 kb on - strand at 90.185 kb on + strand at 90.185 kb on + strand at 90.307 kb on - strand at 90.327 kb on + strand at 90.328 kb on - strand, within CA264_00415 at 91.122 kb on - strand, within CA264_00415 at 91.528 kb on - strand at 91.532 kb on + strand at 91.535 kb on - strand at 91.535 kb on - strand at 91.551 kb on + strand at 91.552 kb on - strand at 91.600 kb on - strand at 91.644 kb on - strand at 91.663 kb on - strand, within CA264_00420 at 91.778 kb on + strand, within CA264_00420 at 91.779 kb on - strand, within CA264_00420 at 91.837 kb on - strand, within CA264_00420 at 91.888 kb on + strand, within CA264_00420 at 91.888 kb on + strand, within CA264_00420 at 92.057 kb on - strand, within CA264_00420 at 92.113 kb on + strand, within CA264_00420 at 92.178 kb on + strand, within CA264_00420 at 92.199 kb on + strand, within CA264_00420 at 92.234 kb on - strand, within CA264_00420 at 92.243 kb on - strand, within CA264_00420 at 92.401 kb on - strand, within CA264_00420
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 89,224 + -0.2 89,229 + -2.9 89,230 - -1.9 89,263 + -1.3 89,263 + -1.0 89,264 - -0.9 89,265 + -0.6 89,288 + -0.8 89,289 - +2.1 89,309 + -1.6 89,310 - -0.1 89,321 - -0.2 89,410 - CA264_00410 0.11 -0.4 89,547 + CA264_00410 0.28 -1.9 89,547 + CA264_00410 0.28 -2.0 89,609 - CA264_00410 0.36 -0.9 89,609 - CA264_00410 0.36 +0.1 89,705 - CA264_00410 0.49 +1.0 89,705 - CA264_00410 0.49 +0.3 89,705 - CA264_00410 0.49 +0.3 89,705 - CA264_00410 0.49 -0.3 89,821 + CA264_00410 0.64 -2.2 89,821 + CA264_00410 0.64 -0.3 89,822 - CA264_00410 0.64 -0.6 90,089 + -3.1 90,090 - -0.6 90,103 + -3.1 90,104 - -0.7 90,104 - -0.6 90,104 - -1.0 90,185 + -3.5 90,185 + -3.1 90,307 - -0.8 90,327 + -3.8 90,328 - CA264_00415 0.10 -3.4 91,122 - CA264_00415 0.72 -3.3 91,528 - +0.4 91,532 + -0.2 91,535 - +0.2 91,535 - +0.0 91,551 + -0.2 91,552 - +1.3 91,600 - +1.2 91,644 - +0.2 91,663 - CA264_00420 0.11 +1.0 91,778 + CA264_00420 0.22 +1.6 91,779 - CA264_00420 0.23 +0.8 91,837 - CA264_00420 0.28 +1.2 91,888 + CA264_00420 0.33 +0.8 91,888 + CA264_00420 0.33 +0.7 92,057 - CA264_00420 0.50 +0.6 92,113 + CA264_00420 0.56 +0.1 92,178 + CA264_00420 0.62 +1.2 92,199 + CA264_00420 0.64 +1.0 92,234 - CA264_00420 0.68 +0.9 92,243 - CA264_00420 0.69 +0.5 92,401 - CA264_00420 0.84 -1.0
Or see this region's nucleotide sequence