Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00280 and CA264_00285 are separated by 155 nucleotides CA264_00285 and CA264_00290 are separated by 190 nucleotides
CA264_00280: CA264_00280 - DegT/DnrJ/EryC1/StrS aminotransferase, at 66,571 to 67,683
_00280
CA264_00285: CA264_00285 - glycosyl transferase, at 67,839 to 68,786
_00285
CA264_00290: CA264_00290 - acyl-ACP desaturase, at 68,977 to 69,957
_00290
Position (kb)
67
68
69 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 66.895 kb on + strand, within CA264_00280 at 66.895 kb on + strand, within CA264_00280 at 66.896 kb on - strand, within CA264_00280 at 66.901 kb on + strand, within CA264_00280 at 66.902 kb on - strand, within CA264_00280 at 66.902 kb on - strand, within CA264_00280 at 67.145 kb on + strand, within CA264_00280 at 67.166 kb on + strand, within CA264_00280 at 67.214 kb on - strand, within CA264_00280 at 67.381 kb on + strand, within CA264_00280 at 67.420 kb on + strand, within CA264_00280 at 67.420 kb on + strand, within CA264_00280 at 67.420 kb on + strand, within CA264_00280 at 67.421 kb on - strand, within CA264_00280 at 67.421 kb on - strand, within CA264_00280 at 67.421 kb on - strand, within CA264_00280 at 67.421 kb on - strand, within CA264_00280 at 67.425 kb on + strand, within CA264_00280 at 67.431 kb on + strand, within CA264_00280 at 67.466 kb on + strand, within CA264_00280 at 67.466 kb on + strand, within CA264_00280 at 67.466 kb on + strand, within CA264_00280 at 67.467 kb on - strand, within CA264_00280 at 67.467 kb on - strand, within CA264_00280 at 67.467 kb on - strand, within CA264_00280 at 67.469 kb on - strand, within CA264_00280 at 67.469 kb on - strand, within CA264_00280 at 67.504 kb on + strand, within CA264_00280 at 67.537 kb on - strand, within CA264_00280 at 67.550 kb on - strand, within CA264_00280 at 67.552 kb on - strand, within CA264_00280 at 67.649 kb on + strand at 67.650 kb on - strand at 67.659 kb on - strand at 67.778 kb on + strand at 67.778 kb on + strand at 67.779 kb on - strand at 67.879 kb on - strand at 67.932 kb on + strand at 67.967 kb on + strand, within CA264_00285 at 67.967 kb on + strand, within CA264_00285 at 67.968 kb on - strand, within CA264_00285 at 68.001 kb on + strand, within CA264_00285 at 68.001 kb on + strand, within CA264_00285 at 68.031 kb on - strand, within CA264_00285 at 68.070 kb on - strand, within CA264_00285 at 68.199 kb on + strand, within CA264_00285 at 68.241 kb on + strand, within CA264_00285 at 68.242 kb on - strand, within CA264_00285 at 68.259 kb on + strand, within CA264_00285 at 68.260 kb on - strand, within CA264_00285 at 68.260 kb on - strand, within CA264_00285 at 68.260 kb on - strand, within CA264_00285 at 68.261 kb on + strand, within CA264_00285 at 68.262 kb on - strand, within CA264_00285 at 68.436 kb on + strand, within CA264_00285 at 68.560 kb on + strand, within CA264_00285 at 68.560 kb on + strand, within CA264_00285 at 68.560 kb on + strand, within CA264_00285 at 68.561 kb on - strand, within CA264_00285 at 68.600 kb on - strand, within CA264_00285 at 68.622 kb on + strand, within CA264_00285 at 68.622 kb on + strand, within CA264_00285 at 68.623 kb on - strand, within CA264_00285 at 68.623 kb on - strand, within CA264_00285 at 68.623 kb on - strand, within CA264_00285 at 68.696 kb on + strand at 68.697 kb on - strand at 68.697 kb on - strand at 68.708 kb on + strand at 68.720 kb on - strand at 68.763 kb on + strand at 68.764 kb on - strand at 68.835 kb on + strand at 68.836 kb on - strand at 68.840 kb on + strand at 68.840 kb on + strand at 68.841 kb on - strand at 68.841 kb on - strand at 68.841 kb on - strand at 68.841 kb on - strand at 68.841 kb on - strand at 68.842 kb on + strand at 68.843 kb on - strand at 68.844 kb on + strand at 68.845 kb on - strand at 68.886 kb on + strand at 68.886 kb on + strand at 68.886 kb on + strand at 68.887 kb on - strand at 68.887 kb on - strand at 68.942 kb on + strand at 68.948 kb on + strand at 68.948 kb on + strand at 68.949 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 66,895 + CA264_00280 0.29 +2.1 66,895 + CA264_00280 0.29 +1.5 66,896 - CA264_00280 0.29 +2.0 66,901 + CA264_00280 0.30 +1.3 66,902 - CA264_00280 0.30 +2.4 66,902 - CA264_00280 0.30 +2.2 67,145 + CA264_00280 0.52 +2.2 67,166 + CA264_00280 0.53 +1.6 67,214 - CA264_00280 0.58 +2.1 67,381 + CA264_00280 0.73 +2.3 67,420 + CA264_00280 0.76 +1.2 67,420 + CA264_00280 0.76 +2.3 67,420 + CA264_00280 0.76 +1.2 67,421 - CA264_00280 0.76 +0.7 67,421 - CA264_00280 0.76 +1.9 67,421 - CA264_00280 0.76 +2.1 67,421 - CA264_00280 0.76 +2.6 67,425 + CA264_00280 0.77 +2.2 67,431 + CA264_00280 0.77 +1.8 67,466 + CA264_00280 0.80 +1.8 67,466 + CA264_00280 0.80 +2.3 67,466 + CA264_00280 0.80 +2.5 67,467 - CA264_00280 0.81 +0.8 67,467 - CA264_00280 0.81 +2.9 67,467 - CA264_00280 0.81 +1.5 67,469 - CA264_00280 0.81 +1.7 67,469 - CA264_00280 0.81 +2.1 67,504 + CA264_00280 0.84 +1.7 67,537 - CA264_00280 0.87 +2.1 67,550 - CA264_00280 0.88 +2.0 67,552 - CA264_00280 0.88 +1.7 67,649 + +0.9 67,650 - +1.6 67,659 - +2.6 67,778 + -2.4 67,778 + +1.4 67,779 - +1.4 67,879 - +1.7 67,932 + +1.4 67,967 + CA264_00285 0.14 +1.9 67,967 + CA264_00285 0.14 +2.0 67,968 - CA264_00285 0.14 +1.5 68,001 + CA264_00285 0.17 +1.7 68,001 + CA264_00285 0.17 +1.8 68,031 - CA264_00285 0.20 +1.3 68,070 - CA264_00285 0.24 +2.3 68,199 + CA264_00285 0.38 +1.6 68,241 + CA264_00285 0.42 +1.8 68,242 - CA264_00285 0.43 +2.7 68,259 + CA264_00285 0.44 +2.1 68,260 - CA264_00285 0.44 +1.9 68,260 - CA264_00285 0.44 +1.5 68,260 - CA264_00285 0.44 +1.7 68,261 + CA264_00285 0.45 +1.9 68,262 - CA264_00285 0.45 +1.5 68,436 + CA264_00285 0.63 +1.5 68,560 + CA264_00285 0.76 +1.6 68,560 + CA264_00285 0.76 +1.5 68,560 + CA264_00285 0.76 +2.0 68,561 - CA264_00285 0.76 +1.8 68,600 - CA264_00285 0.80 +1.5 68,622 + CA264_00285 0.83 +2.5 68,622 + CA264_00285 0.83 +2.1 68,623 - CA264_00285 0.83 +2.0 68,623 - CA264_00285 0.83 +2.3 68,623 - CA264_00285 0.83 +2.2 68,696 + +2.3 68,697 - +1.4 68,697 - +1.8 68,708 + +2.0 68,720 - +1.9 68,763 + +0.3 68,764 - +1.3 68,835 + -0.1 68,836 - -0.4 68,840 + -0.1 68,840 + -1.3 68,841 - -1.3 68,841 - -1.0 68,841 - -0.2 68,841 - -0.5 68,841 - +0.4 68,842 + -1.5 68,843 - +0.6 68,844 + -1.1 68,845 - -1.9 68,886 + -0.7 68,886 + +0.1 68,886 + -1.5 68,887 - +0.0 68,887 - +0.1 68,942 + -1.1 68,948 + -1.1 68,948 + -1.1 68,949 - -0.8
Or see this region's nucleotide sequence