Experiment: m.b. Cephalothin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00135 and CA264_00140 are separated by 242 nucleotides CA264_00140 and CA264_00145 are separated by 165 nucleotides CA264_00145 and CA264_00150 are separated by 107 nucleotides CA264_00150 and CA264_00155 overlap by 59 nucleotides
CA264_00135: CA264_00135 - transcriptional regulator, at 36,133 to 36,453
_00135
CA264_00140: CA264_00140 - hypothetical protein, at 36,696 to 36,908
_00140
CA264_00145: CA264_00145 - DNA mismatch repair protein MutT, at 37,074 to 37,637
_00145
CA264_00150: CA264_00150 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 37,745 to 38,551
_00150
CA264_00155: CA264_00155 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C, at 38,493 to 38,780
_00155
Position (kb) 37
38 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 36.186 kb on + strand, within CA264_00135 at 36.251 kb on + strand, within CA264_00135 at 36.483 kb on - strand at 36.490 kb on - strand at 36.543 kb on + strand at 36.569 kb on - strand at 36.632 kb on + strand at 36.640 kb on - strand at 36.672 kb on + strand at 36.673 kb on - strand at 36.673 kb on - strand at 36.693 kb on - strand at 36.694 kb on + strand at 36.694 kb on + strand at 36.695 kb on - strand at 36.721 kb on + strand, within CA264_00140 at 36.740 kb on + strand, within CA264_00140 at 36.748 kb on + strand, within CA264_00140 at 36.749 kb on - strand, within CA264_00140 at 36.749 kb on - strand, within CA264_00140 at 36.753 kb on - strand, within CA264_00140 at 36.753 kb on - strand, within CA264_00140 at 36.773 kb on - strand, within CA264_00140 at 36.791 kb on - strand, within CA264_00140 at 36.819 kb on + strand, within CA264_00140 at 36.868 kb on + strand, within CA264_00140 at 36.920 kb on - strand at 36.932 kb on + strand at 36.932 kb on + strand at 36.933 kb on - strand at 36.933 kb on - strand at 36.933 kb on - strand at 36.933 kb on - strand at 36.934 kb on + strand at 36.935 kb on - strand at 36.965 kb on + strand at 36.965 kb on + strand at 36.965 kb on + strand at 36.966 kb on - strand at 36.966 kb on - strand at 37.023 kb on - strand at 37.059 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.068 kb on + strand at 37.069 kb on + strand at 37.069 kb on - strand at 37.069 kb on - strand at 37.069 kb on - strand at 37.069 kb on - strand at 37.074 kb on - strand at 37.142 kb on - strand, within CA264_00145 at 37.199 kb on - strand, within CA264_00145 at 37.252 kb on - strand, within CA264_00145 at 37.253 kb on + strand, within CA264_00145 at 37.253 kb on + strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.254 kb on - strand, within CA264_00145 at 37.257 kb on + strand, within CA264_00145 at 37.273 kb on - strand, within CA264_00145 at 37.294 kb on - strand, within CA264_00145 at 37.306 kb on + strand, within CA264_00145 at 37.307 kb on - strand, within CA264_00145 at 37.405 kb on + strand, within CA264_00145 at 37.405 kb on + strand, within CA264_00145 at 37.405 kb on + strand, within CA264_00145 at 37.405 kb on + strand, within CA264_00145 at 37.471 kb on + strand, within CA264_00145 at 37.569 kb on - strand, within CA264_00145 at 37.636 kb on - strand at 37.636 kb on - strand at 37.673 kb on + strand at 37.673 kb on + strand at 37.673 kb on + strand at 37.675 kb on + strand at 37.713 kb on + strand at 37.714 kb on - strand at 37.760 kb on + strand at 37.779 kb on - strand at 37.779 kb on - strand at 37.821 kb on + strand at 37.868 kb on - strand, within CA264_00150 at 37.871 kb on + strand, within CA264_00150 at 37.884 kb on + strand, within CA264_00150 at 37.999 kb on + strand, within CA264_00150 at 38.000 kb on + strand, within CA264_00150 at 38.000 kb on + strand, within CA264_00150 at 38.042 kb on - strand, within CA264_00150 at 38.045 kb on - strand, within CA264_00150 at 38.096 kb on + strand, within CA264_00150 at 38.119 kb on - strand, within CA264_00150 at 38.119 kb on - strand, within CA264_00150 at 38.158 kb on - strand, within CA264_00150 at 38.315 kb on + strand, within CA264_00150 at 38.358 kb on + strand, within CA264_00150 at 38.375 kb on - strand, within CA264_00150 at 38.482 kb on + strand at 38.486 kb on - strand at 38.486 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.005 mg/ml remove 36,186 + CA264_00135 0.17 -0.7 36,251 + CA264_00135 0.37 -2.0 36,483 - +0.1 36,490 - -0.5 36,543 + +0.2 36,569 - -0.2 36,632 + -0.1 36,640 - -0.6 36,672 + +0.9 36,673 - -2.4 36,673 - -0.6 36,693 - -1.4 36,694 + -1.3 36,694 + -2.8 36,695 - -0.6 36,721 + CA264_00140 0.12 -0.0 36,740 + CA264_00140 0.21 -0.6 36,748 + CA264_00140 0.24 +0.5 36,749 - CA264_00140 0.25 -1.1 36,749 - CA264_00140 0.25 -0.7 36,753 - CA264_00140 0.27 -0.7 36,753 - CA264_00140 0.27 -1.1 36,773 - CA264_00140 0.36 -0.9 36,791 - CA264_00140 0.45 -1.1 36,819 + CA264_00140 0.58 -0.4 36,868 + CA264_00140 0.81 -1.0 36,920 - -0.4 36,932 + -0.6 36,932 + +0.1 36,933 - -0.1 36,933 - +0.3 36,933 - -0.7 36,933 - +1.1 36,934 + -0.2 36,935 - +0.8 36,965 + -0.6 36,965 + -0.3 36,965 + -0.3 36,966 - +0.4 36,966 - +0.0 37,023 - +0.8 37,059 + -0.3 37,068 + +0.7 37,068 + -1.2 37,068 + +0.1 37,068 + +0.8 37,068 + +0.9 37,068 + -0.2 37,069 + -0.8 37,069 - -1.9 37,069 - -0.3 37,069 - -0.2 37,069 - -0.3 37,074 - -0.1 37,142 - CA264_00145 0.12 +0.4 37,199 - CA264_00145 0.22 -0.3 37,252 - CA264_00145 0.32 +1.1 37,253 + CA264_00145 0.32 -0.3 37,253 + CA264_00145 0.32 -0.9 37,254 - CA264_00145 0.32 +0.4 37,254 - CA264_00145 0.32 -0.8 37,254 - CA264_00145 0.32 -0.9 37,254 - CA264_00145 0.32 +1.2 37,254 - CA264_00145 0.32 -0.2 37,254 - CA264_00145 0.32 -0.5 37,254 - CA264_00145 0.32 +0.1 37,257 + CA264_00145 0.32 -1.0 37,273 - CA264_00145 0.35 -0.4 37,294 - CA264_00145 0.39 -0.7 37,306 + CA264_00145 0.41 -0.6 37,307 - CA264_00145 0.41 -0.8 37,405 + CA264_00145 0.59 -0.5 37,405 + CA264_00145 0.59 -0.5 37,405 + CA264_00145 0.59 -0.8 37,405 + CA264_00145 0.59 +0.9 37,471 + CA264_00145 0.70 -0.2 37,569 - CA264_00145 0.88 -0.5 37,636 - -0.0 37,636 - -0.1 37,673 + -0.6 37,673 + +0.1 37,673 + +0.6 37,675 + -1.2 37,713 + -1.8 37,714 - +0.8 37,760 + -1.0 37,779 - -0.9 37,779 - +0.6 37,821 + +0.6 37,868 - CA264_00150 0.15 -0.1 37,871 + CA264_00150 0.16 +1.2 37,884 + CA264_00150 0.17 -0.0 37,999 + CA264_00150 0.31 +0.1 38,000 + CA264_00150 0.32 -0.4 38,000 + CA264_00150 0.32 +0.1 38,042 - CA264_00150 0.37 -0.1 38,045 - CA264_00150 0.37 +1.1 38,096 + CA264_00150 0.43 -0.4 38,119 - CA264_00150 0.46 -0.9 38,119 - CA264_00150 0.46 +0.7 38,158 - CA264_00150 0.51 -0.1 38,315 + CA264_00150 0.71 -0.1 38,358 + CA264_00150 0.76 +0.2 38,375 - CA264_00150 0.78 +0.3 38,482 + +1.0 38,486 - -0.1 38,486 - +0.4
Or see this region's nucleotide sequence