Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4681 and Echvi_4682 are separated by 15 nucleotides Echvi_4682 and Echvi_4683 are separated by 492 nucleotides Echvi_4683 and Echvi_4684 overlap by 4 nucleotides
Echvi_4681: Echvi_4681 - Thioredoxin reductase, at 5,602,755 to 5,603,759
_4681
Echvi_4682: Echvi_4682 - Ferredoxin, at 5,603,775 to 5,604,095
_4682
Echvi_4683: Echvi_4683 - Methylmalonyl-CoA mutase, N-terminal domain/subunit, at 5,604,588 to 5,606,645
_4683
Echvi_4684: Echvi_4684 - Methylmalonyl-CoA mutase, N-terminal domain/subunit, at 5,606,642 to 5,607,868
_4684
Position (kb)
5604
5605
5606
5607 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5604.094 kb on - strand at 5604.111 kb on - strand at 5604.115 kb on - strand at 5604.149 kb on - strand at 5604.231 kb on - strand at 5604.258 kb on + strand at 5604.259 kb on - strand at 5604.386 kb on + strand at 5604.447 kb on - strand at 5604.447 kb on - strand at 5604.454 kb on - strand at 5604.461 kb on - strand at 5604.481 kb on + strand at 5604.481 kb on + strand at 5604.481 kb on + strand at 5604.482 kb on - strand at 5604.482 kb on - strand at 5604.490 kb on + strand at 5604.490 kb on + strand at 5604.490 kb on + strand at 5604.490 kb on + strand at 5604.490 kb on + strand at 5604.491 kb on - strand at 5604.491 kb on - strand at 5604.500 kb on + strand at 5604.549 kb on + strand at 5604.550 kb on - strand at 5604.550 kb on - strand at 5604.553 kb on + strand at 5604.560 kb on + strand at 5604.560 kb on + strand at 5604.561 kb on - strand at 5604.561 kb on - strand at 5604.589 kb on + strand at 5604.597 kb on + strand at 5604.678 kb on + strand at 5604.679 kb on - strand at 5604.729 kb on - strand at 5604.757 kb on - strand at 5604.757 kb on - strand at 5604.757 kb on - strand at 5604.777 kb on + strand at 5604.778 kb on - strand at 5605.009 kb on - strand, within Echvi_4683 at 5605.058 kb on - strand, within Echvi_4683 at 5605.058 kb on - strand, within Echvi_4683 at 5605.100 kb on - strand, within Echvi_4683 at 5605.112 kb on + strand, within Echvi_4683 at 5605.122 kb on + strand, within Echvi_4683 at 5605.123 kb on - strand, within Echvi_4683 at 5605.131 kb on + strand, within Echvi_4683 at 5605.136 kb on + strand, within Echvi_4683 at 5605.136 kb on + strand, within Echvi_4683 at 5605.137 kb on - strand, within Echvi_4683 at 5605.137 kb on - strand, within Echvi_4683 at 5605.158 kb on + strand, within Echvi_4683 at 5605.339 kb on - strand, within Echvi_4683 at 5605.362 kb on + strand, within Echvi_4683 at 5605.362 kb on + strand, within Echvi_4683 at 5605.413 kb on + strand, within Echvi_4683 at 5605.571 kb on - strand, within Echvi_4683 at 5605.658 kb on + strand, within Echvi_4683 at 5605.724 kb on + strand, within Echvi_4683 at 5605.954 kb on + strand, within Echvi_4683 at 5605.954 kb on + strand, within Echvi_4683 at 5605.977 kb on - strand, within Echvi_4683 at 5606.018 kb on + strand, within Echvi_4683 at 5606.018 kb on + strand, within Echvi_4683 at 5606.019 kb on - strand, within Echvi_4683 at 5606.019 kb on - strand, within Echvi_4683 at 5606.117 kb on - strand, within Echvi_4683 at 5606.120 kb on + strand, within Echvi_4683 at 5606.120 kb on + strand, within Echvi_4683 at 5606.120 kb on + strand, within Echvi_4683 at 5606.121 kb on - strand, within Echvi_4683 at 5606.122 kb on + strand, within Echvi_4683 at 5606.122 kb on + strand, within Echvi_4683 at 5606.122 kb on + strand, within Echvi_4683 at 5606.122 kb on + strand, within Echvi_4683 at 5606.122 kb on + strand, within Echvi_4683 at 5606.123 kb on - strand, within Echvi_4683 at 5606.123 kb on - strand, within Echvi_4683 at 5606.123 kb on - strand, within Echvi_4683 at 5606.123 kb on - strand, within Echvi_4683 at 5606.123 kb on - strand, within Echvi_4683 at 5606.126 kb on + strand, within Echvi_4683 at 5606.216 kb on + strand, within Echvi_4683 at 5606.216 kb on + strand, within Echvi_4683 at 5606.218 kb on + strand, within Echvi_4683 at 5606.218 kb on + strand, within Echvi_4683 at 5606.218 kb on + strand, within Echvi_4683 at 5606.219 kb on - strand, within Echvi_4683 at 5606.485 kb on + strand at 5606.485 kb on + strand at 5606.515 kb on + strand at 5606.516 kb on - strand at 5606.516 kb on - strand at 5606.523 kb on - strand at 5606.528 kb on - strand at 5606.528 kb on - strand at 5606.645 kb on + strand at 5606.645 kb on + strand at 5606.769 kb on + strand, within Echvi_4684 at 5606.769 kb on + strand, within Echvi_4684 at 5606.818 kb on - strand, within Echvi_4684 at 5606.818 kb on - strand, within Echvi_4684 at 5606.861 kb on + strand, within Echvi_4684 at 5606.862 kb on - strand, within Echvi_4684 at 5606.862 kb on - strand, within Echvi_4684 at 5606.881 kb on + strand, within Echvi_4684 at 5606.882 kb on - strand, within Echvi_4684 at 5606.898 kb on - strand, within Echvi_4684 at 5606.902 kb on + strand, within Echvi_4684 at 5606.902 kb on + strand, within Echvi_4684 at 5606.902 kb on + strand, within Echvi_4684 at 5606.903 kb on - strand, within Echvi_4684 at 5606.903 kb on - strand, within Echvi_4684 at 5606.908 kb on + strand, within Echvi_4684 at 5606.942 kb on - strand, within Echvi_4684 at 5606.949 kb on - strand, within Echvi_4684 at 5606.953 kb on + strand, within Echvi_4684 at 5606.960 kb on - strand, within Echvi_4684 at 5606.961 kb on + strand, within Echvi_4684 at 5606.961 kb on + strand, within Echvi_4684 at 5606.962 kb on - strand, within Echvi_4684 at 5606.962 kb on - strand, within Echvi_4684 at 5607.049 kb on - strand, within Echvi_4684 at 5607.165 kb on + strand, within Echvi_4684 at 5607.185 kb on + strand, within Echvi_4684 at 5607.200 kb on + strand, within Echvi_4684 at 5607.224 kb on - strand, within Echvi_4684 at 5607.241 kb on + strand, within Echvi_4684 at 5607.279 kb on - strand, within Echvi_4684 at 5607.564 kb on - strand, within Echvi_4684 at 5607.587 kb on + strand, within Echvi_4684
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 5,604,094 - +0.9 5,604,111 - +0.8 5,604,115 - +0.9 5,604,149 - +0.1 5,604,231 - -1.3 5,604,258 + +0.3 5,604,259 - -0.8 5,604,386 + +0.3 5,604,447 - +0.5 5,604,447 - -0.4 5,604,454 - +0.1 5,604,461 - +1.9 5,604,481 + -1.3 5,604,481 + +0.3 5,604,481 + -0.2 5,604,482 - +0.3 5,604,482 - -0.0 5,604,490 + -2.1 5,604,490 + -0.5 5,604,490 + +0.2 5,604,490 + -0.1 5,604,490 + +1.0 5,604,491 - -0.1 5,604,491 - -0.2 5,604,500 + +0.1 5,604,549 + -1.5 5,604,550 - -0.5 5,604,550 - -0.1 5,604,553 + -1.2 5,604,560 + -0.0 5,604,560 + -0.7 5,604,561 - -0.9 5,604,561 - +0.3 5,604,589 + -0.1 5,604,597 + +0.3 5,604,678 + -0.2 5,604,679 - -2.5 5,604,729 - +0.2 5,604,757 - -1.7 5,604,757 - -0.6 5,604,757 - +0.5 5,604,777 + +0.3 5,604,778 - -0.3 5,605,009 - Echvi_4683 0.20 -0.7 5,605,058 - Echvi_4683 0.23 -0.4 5,605,058 - Echvi_4683 0.23 -0.5 5,605,100 - Echvi_4683 0.25 -0.2 5,605,112 + Echvi_4683 0.25 -0.2 5,605,122 + Echvi_4683 0.26 -0.7 5,605,123 - Echvi_4683 0.26 +0.1 5,605,131 + Echvi_4683 0.26 +0.0 5,605,136 + Echvi_4683 0.27 +0.7 5,605,136 + Echvi_4683 0.27 +1.9 5,605,137 - Echvi_4683 0.27 +0.5 5,605,137 - Echvi_4683 0.27 -1.7 5,605,158 + Echvi_4683 0.28 -0.4 5,605,339 - Echvi_4683 0.36 +1.1 5,605,362 + Echvi_4683 0.38 +0.9 5,605,362 + Echvi_4683 0.38 -0.1 5,605,413 + Echvi_4683 0.40 -0.9 5,605,571 - Echvi_4683 0.48 -0.1 5,605,658 + Echvi_4683 0.52 -0.7 5,605,724 + Echvi_4683 0.55 -0.4 5,605,954 + Echvi_4683 0.66 +1.0 5,605,954 + Echvi_4683 0.66 -0.2 5,605,977 - Echvi_4683 0.67 +0.3 5,606,018 + Echvi_4683 0.69 +0.6 5,606,018 + Echvi_4683 0.69 -0.1 5,606,019 - Echvi_4683 0.70 -1.1 5,606,019 - Echvi_4683 0.70 +0.0 5,606,117 - Echvi_4683 0.74 +2.3 5,606,120 + Echvi_4683 0.74 -0.2 5,606,120 + Echvi_4683 0.74 +0.8 5,606,120 + Echvi_4683 0.74 +0.4 5,606,121 - Echvi_4683 0.74 -1.1 5,606,122 + Echvi_4683 0.75 +0.4 5,606,122 + Echvi_4683 0.75 -2.1 5,606,122 + Echvi_4683 0.75 +2.3 5,606,122 + Echvi_4683 0.75 -2.0 5,606,122 + Echvi_4683 0.75 -0.1 5,606,123 - Echvi_4683 0.75 +0.8 5,606,123 - Echvi_4683 0.75 +0.1 5,606,123 - Echvi_4683 0.75 -1.3 5,606,123 - Echvi_4683 0.75 -0.4 5,606,123 - Echvi_4683 0.75 +0.4 5,606,126 + Echvi_4683 0.75 -0.4 5,606,216 + Echvi_4683 0.79 -0.3 5,606,216 + Echvi_4683 0.79 +0.3 5,606,218 + Echvi_4683 0.79 +0.3 5,606,218 + Echvi_4683 0.79 +1.2 5,606,218 + Echvi_4683 0.79 -0.8 5,606,219 - Echvi_4683 0.79 +1.0 5,606,485 + -1.3 5,606,485 + -1.1 5,606,515 + -1.8 5,606,516 - +0.0 5,606,516 - -0.1 5,606,523 - +0.6 5,606,528 - -2.1 5,606,528 - +0.8 5,606,645 + +0.6 5,606,645 + +2.6 5,606,769 + Echvi_4684 0.10 -0.5 5,606,769 + Echvi_4684 0.10 -0.7 5,606,818 - Echvi_4684 0.14 +1.2 5,606,818 - Echvi_4684 0.14 -1.7 5,606,861 + Echvi_4684 0.18 -0.2 5,606,862 - Echvi_4684 0.18 -0.7 5,606,862 - Echvi_4684 0.18 +0.3 5,606,881 + Echvi_4684 0.19 +1.3 5,606,882 - Echvi_4684 0.20 +1.0 5,606,898 - Echvi_4684 0.21 -0.5 5,606,902 + Echvi_4684 0.21 -0.3 5,606,902 + Echvi_4684 0.21 +0.6 5,606,902 + Echvi_4684 0.21 -0.1 5,606,903 - Echvi_4684 0.21 -0.2 5,606,903 - Echvi_4684 0.21 -1.6 5,606,908 + Echvi_4684 0.22 -0.2 5,606,942 - Echvi_4684 0.24 -0.8 5,606,949 - Echvi_4684 0.25 -1.1 5,606,953 + Echvi_4684 0.25 -0.1 5,606,960 - Echvi_4684 0.26 +0.5 5,606,961 + Echvi_4684 0.26 -0.9 5,606,961 + Echvi_4684 0.26 +0.3 5,606,962 - Echvi_4684 0.26 -0.6 5,606,962 - Echvi_4684 0.26 +0.2 5,607,049 - Echvi_4684 0.33 +0.2 5,607,165 + Echvi_4684 0.43 +0.3 5,607,185 + Echvi_4684 0.44 -1.6 5,607,200 + Echvi_4684 0.45 -1.4 5,607,224 - Echvi_4684 0.47 -0.2 5,607,241 + Echvi_4684 0.49 +0.1 5,607,279 - Echvi_4684 0.52 -2.4 5,607,564 - Echvi_4684 0.75 +1.9 5,607,587 + Echvi_4684 0.77 +0.3
Or see this region's nucleotide sequence