Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4264 and Echvi_4265 overlap by 4 nucleotides Echvi_4265 and Echvi_4266 are separated by 509 nucleotides Echvi_4266 and Echvi_4267 overlap by 8 nucleotides Echvi_4267 and Echvi_4268 are separated by 182 nucleotides Echvi_4268 and Echvi_4269 are separated by 36 nucleotides
Echvi_4264: Echvi_4264 - hypothetical protein, at 5,119,283 to 5,119,975
_4264
Echvi_4265: Echvi_4265 - hypothetical protein, at 5,119,972 to 5,120,103
_4265
Echvi_4266: Echvi_4266 - Uncharacterized conserved protein, at 5,120,613 to 5,121,113
_4266
Echvi_4267: Echvi_4267 - Predicted transcriptional regulators, at 5,121,106 to 5,121,429
_4267
Echvi_4268: Echvi_4268 - hypothetical protein, at 5,121,612 to 5,121,827
_4268
Echvi_4269: Echvi_4269 - Uncharacterized protein conserved in bacteria, at 5,121,864 to 5,122,442
_4269
Position (kb)
5120
5121
5122 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5119.632 kb on + strand, within Echvi_4264 at 5119.633 kb on - strand, within Echvi_4264 at 5119.759 kb on + strand, within Echvi_4264 at 5119.775 kb on - strand, within Echvi_4264 at 5119.820 kb on + strand, within Echvi_4264 at 5119.821 kb on - strand, within Echvi_4264 at 5119.850 kb on + strand, within Echvi_4264 at 5119.852 kb on + strand, within Echvi_4264 at 5119.852 kb on + strand, within Echvi_4264 at 5119.852 kb on + strand, within Echvi_4264 at 5119.996 kb on + strand, within Echvi_4265 at 5119.996 kb on + strand, within Echvi_4265 at 5120.005 kb on + strand, within Echvi_4265 at 5120.106 kb on + strand at 5120.106 kb on + strand at 5120.107 kb on - strand at 5120.107 kb on - strand at 5120.119 kb on + strand at 5120.128 kb on - strand at 5120.128 kb on - strand at 5120.128 kb on - strand at 5120.130 kb on - strand at 5120.132 kb on + strand at 5120.173 kb on + strand at 5120.215 kb on - strand at 5120.218 kb on - strand at 5120.261 kb on - strand at 5120.263 kb on + strand at 5120.263 kb on + strand at 5120.264 kb on - strand at 5120.264 kb on - strand at 5120.432 kb on + strand at 5120.442 kb on + strand at 5120.442 kb on + strand at 5120.442 kb on + strand at 5120.442 kb on + strand at 5120.473 kb on + strand at 5120.474 kb on - strand at 5120.480 kb on + strand at 5120.593 kb on + strand at 5120.621 kb on + strand at 5120.673 kb on - strand, within Echvi_4266 at 5120.690 kb on + strand, within Echvi_4266 at 5120.690 kb on + strand, within Echvi_4266 at 5120.691 kb on - strand, within Echvi_4266 at 5120.798 kb on + strand, within Echvi_4266 at 5120.799 kb on - strand, within Echvi_4266 at 5120.848 kb on - strand, within Echvi_4266 at 5120.858 kb on + strand, within Echvi_4266 at 5120.866 kb on + strand, within Echvi_4266 at 5120.876 kb on + strand, within Echvi_4266 at 5120.904 kb on + strand, within Echvi_4266 at 5120.904 kb on + strand, within Echvi_4266 at 5120.905 kb on - strand, within Echvi_4266 at 5120.960 kb on + strand, within Echvi_4266 at 5120.961 kb on - strand, within Echvi_4266 at 5120.961 kb on - strand, within Echvi_4266 at 5120.965 kb on + strand, within Echvi_4266 at 5120.965 kb on + strand, within Echvi_4266 at 5121.022 kb on - strand, within Echvi_4266 at 5121.048 kb on - strand, within Echvi_4266 at 5121.062 kb on + strand, within Echvi_4266 at 5121.062 kb on + strand, within Echvi_4266 at 5121.063 kb on - strand, within Echvi_4266 at 5121.063 kb on - strand, within Echvi_4266 at 5121.066 kb on - strand at 5121.066 kb on - strand at 5121.107 kb on + strand at 5121.107 kb on + strand at 5121.118 kb on - strand at 5121.118 kb on - strand at 5121.127 kb on + strand at 5121.128 kb on - strand at 5121.136 kb on + strand at 5121.139 kb on + strand, within Echvi_4267 at 5121.415 kb on + strand at 5121.415 kb on + strand at 5121.415 kb on + strand at 5121.462 kb on + strand at 5121.462 kb on + strand at 5121.466 kb on + strand at 5121.491 kb on - strand at 5121.524 kb on + strand at 5121.525 kb on - strand at 5121.525 kb on - strand at 5121.586 kb on - strand at 5121.590 kb on - strand at 5121.590 kb on - strand at 5121.590 kb on - strand at 5121.625 kb on - strand at 5121.625 kb on - strand at 5121.625 kb on - strand at 5121.711 kb on - strand, within Echvi_4268 at 5121.738 kb on - strand, within Echvi_4268 at 5121.742 kb on + strand, within Echvi_4268 at 5121.752 kb on - strand, within Echvi_4268 at 5121.774 kb on + strand, within Echvi_4268 at 5121.774 kb on + strand, within Echvi_4268 at 5121.774 kb on + strand, within Echvi_4268 at 5121.775 kb on - strand, within Echvi_4268 at 5121.775 kb on - strand, within Echvi_4268 at 5121.780 kb on - strand, within Echvi_4268 at 5121.780 kb on - strand, within Echvi_4268 at 5121.844 kb on - strand at 5121.875 kb on + strand at 5121.892 kb on - strand at 5121.894 kb on + strand at 5121.990 kb on + strand, within Echvi_4269 at 5121.990 kb on + strand, within Echvi_4269 at 5121.990 kb on + strand, within Echvi_4269 at 5121.991 kb on - strand, within Echvi_4269 at 5121.997 kb on + strand, within Echvi_4269 at 5121.998 kb on - strand, within Echvi_4269 at 5122.049 kb on + strand, within Echvi_4269
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 5,119,632 + Echvi_4264 0.50 -0.0 5,119,633 - Echvi_4264 0.51 +0.5 5,119,759 + Echvi_4264 0.69 -0.9 5,119,775 - Echvi_4264 0.71 -0.2 5,119,820 + Echvi_4264 0.77 -0.4 5,119,821 - Echvi_4264 0.78 +1.0 5,119,850 + Echvi_4264 0.82 -0.2 5,119,852 + Echvi_4264 0.82 +1.9 5,119,852 + Echvi_4264 0.82 -1.8 5,119,852 + Echvi_4264 0.82 -1.0 5,119,996 + Echvi_4265 0.18 +1.0 5,119,996 + Echvi_4265 0.18 -1.8 5,120,005 + Echvi_4265 0.25 +0.9 5,120,106 + +0.4 5,120,106 + -0.7 5,120,107 - +0.9 5,120,107 - -1.6 5,120,119 + -0.5 5,120,128 - +0.3 5,120,128 - -0.0 5,120,128 - -0.5 5,120,130 - -0.4 5,120,132 + +1.4 5,120,173 + +1.0 5,120,215 - +0.7 5,120,218 - +0.7 5,120,261 - -0.6 5,120,263 + +0.7 5,120,263 + +0.3 5,120,264 - -0.7 5,120,264 - +0.5 5,120,432 + +0.8 5,120,442 + -0.4 5,120,442 + +0.7 5,120,442 + -0.5 5,120,442 + -1.6 5,120,473 + -1.3 5,120,474 - +0.0 5,120,480 + +0.3 5,120,593 + +0.7 5,120,621 + -0.9 5,120,673 - Echvi_4266 0.12 -1.1 5,120,690 + Echvi_4266 0.15 +0.7 5,120,690 + Echvi_4266 0.15 +0.4 5,120,691 - Echvi_4266 0.16 +0.3 5,120,798 + Echvi_4266 0.37 +0.1 5,120,799 - Echvi_4266 0.37 +0.8 5,120,848 - Echvi_4266 0.47 -0.7 5,120,858 + Echvi_4266 0.49 +0.4 5,120,866 + Echvi_4266 0.50 -0.5 5,120,876 + Echvi_4266 0.52 +0.2 5,120,904 + Echvi_4266 0.58 +0.2 5,120,904 + Echvi_4266 0.58 +0.7 5,120,905 - Echvi_4266 0.58 -1.2 5,120,960 + Echvi_4266 0.69 -1.1 5,120,961 - Echvi_4266 0.69 +0.5 5,120,961 - Echvi_4266 0.69 +1.5 5,120,965 + Echvi_4266 0.70 -0.2 5,120,965 + Echvi_4266 0.70 +0.1 5,121,022 - Echvi_4266 0.82 +0.1 5,121,048 - Echvi_4266 0.87 +0.2 5,121,062 + Echvi_4266 0.90 +0.8 5,121,062 + Echvi_4266 0.90 -0.2 5,121,063 - Echvi_4266 0.90 -0.0 5,121,063 - Echvi_4266 0.90 +2.0 5,121,066 - -0.7 5,121,066 - -0.7 5,121,107 + +0.6 5,121,107 + -0.2 5,121,118 - -0.1 5,121,118 - +0.3 5,121,127 + -0.4 5,121,128 - -1.0 5,121,136 + +0.8 5,121,139 + Echvi_4267 0.10 -1.5 5,121,415 + +0.6 5,121,415 + +0.2 5,121,415 + -0.8 5,121,462 + -0.8 5,121,462 + -0.6 5,121,466 + -0.6 5,121,491 - +0.4 5,121,524 + -0.3 5,121,525 - -1.4 5,121,525 - +0.6 5,121,586 - +0.0 5,121,590 - -0.7 5,121,590 - +0.3 5,121,590 - +0.3 5,121,625 - -0.2 5,121,625 - -0.7 5,121,625 - -1.1 5,121,711 - Echvi_4268 0.46 -0.0 5,121,738 - Echvi_4268 0.58 +0.7 5,121,742 + Echvi_4268 0.60 -0.3 5,121,752 - Echvi_4268 0.65 +0.6 5,121,774 + Echvi_4268 0.75 -1.3 5,121,774 + Echvi_4268 0.75 +1.1 5,121,774 + Echvi_4268 0.75 -0.1 5,121,775 - Echvi_4268 0.75 +0.3 5,121,775 - Echvi_4268 0.75 +1.5 5,121,780 - Echvi_4268 0.78 +0.2 5,121,780 - Echvi_4268 0.78 +0.6 5,121,844 - -2.2 5,121,875 + +0.0 5,121,892 - -0.5 5,121,894 + +0.3 5,121,990 + Echvi_4269 0.22 +0.4 5,121,990 + Echvi_4269 0.22 -1.0 5,121,990 + Echvi_4269 0.22 -0.3 5,121,991 - Echvi_4269 0.22 -0.2 5,121,997 + Echvi_4269 0.23 +0.9 5,121,998 - Echvi_4269 0.23 -0.8 5,122,049 + Echvi_4269 0.32 -1.1
Or see this region's nucleotide sequence