Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4151 and Echvi_4152 are separated by 176 nucleotides Echvi_4152 and Echvi_4153 are separated by 33 nucleotides
Echvi_4151: Echvi_4151 - Uncharacterized protein conserved in bacteria, at 4,966,690 to 4,969,719
_4151
Echvi_4152: Echvi_4152 - Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen, at 4,969,896 to 4,971,305
_4152
Echvi_4153: Echvi_4153 - Site-specific recombinases, DNA invertase Pin homologs, at 4,971,339 to 4,972,925
_4153
Position (kb)
4969
4970
4971
4972 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4970.323 kb on + strand, within Echvi_4152 at 4970.323 kb on + strand, within Echvi_4152 at 4970.323 kb on + strand, within Echvi_4152 at 4970.472 kb on + strand, within Echvi_4152 at 4970.526 kb on - strand, within Echvi_4152 at 4970.549 kb on + strand, within Echvi_4152 at 4970.550 kb on - strand, within Echvi_4152 at 4970.550 kb on - strand, within Echvi_4152 at 4970.550 kb on - strand, within Echvi_4152 at 4970.570 kb on + strand, within Echvi_4152 at 4970.571 kb on - strand, within Echvi_4152 at 4970.580 kb on + strand, within Echvi_4152 at 4970.580 kb on + strand, within Echvi_4152 at 4970.582 kb on + strand, within Echvi_4152 at 4970.583 kb on - strand, within Echvi_4152 at 4970.583 kb on - strand, within Echvi_4152 at 4970.583 kb on - strand, within Echvi_4152 at 4970.583 kb on - strand, within Echvi_4152 at 4970.626 kb on + strand, within Echvi_4152 at 4970.636 kb on + strand, within Echvi_4152 at 4970.637 kb on - strand, within Echvi_4152 at 4970.656 kb on + strand, within Echvi_4152 at 4970.657 kb on - strand, within Echvi_4152 at 4970.657 kb on - strand, within Echvi_4152 at 4970.665 kb on + strand, within Echvi_4152 at 4970.668 kb on - strand, within Echvi_4152 at 4970.742 kb on + strand, within Echvi_4152 at 4970.742 kb on + strand at 4970.743 kb on - strand, within Echvi_4152 at 4970.792 kb on - strand, within Echvi_4152 at 4970.888 kb on - strand, within Echvi_4152 at 4970.888 kb on - strand, within Echvi_4152 at 4970.892 kb on - strand, within Echvi_4152 at 4970.921 kb on + strand, within Echvi_4152 at 4970.931 kb on - strand, within Echvi_4152 at 4970.945 kb on + strand, within Echvi_4152 at 4970.945 kb on + strand, within Echvi_4152 at 4970.945 kb on + strand, within Echvi_4152 at 4971.299 kb on + strand at 4971.340 kb on + strand at 4971.340 kb on + strand at 4971.341 kb on - strand at 4971.341 kb on - strand at 4971.343 kb on - strand at 4971.344 kb on + strand at 4971.456 kb on + strand at 4971.475 kb on + strand at 4971.597 kb on + strand, within Echvi_4153 at 4971.598 kb on - strand, within Echvi_4153 at 4971.598 kb on - strand, within Echvi_4153 at 4971.606 kb on + strand, within Echvi_4153 at 4971.618 kb on + strand, within Echvi_4153 at 4971.636 kb on + strand, within Echvi_4153 at 4971.693 kb on + strand, within Echvi_4153 at 4971.714 kb on + strand, within Echvi_4153 at 4971.715 kb on - strand, within Echvi_4153 at 4971.791 kb on + strand, within Echvi_4153 at 4971.791 kb on + strand, within Echvi_4153 at 4971.792 kb on - strand, within Echvi_4153 at 4971.819 kb on + strand, within Echvi_4153 at 4971.923 kb on + strand, within Echvi_4153 at 4971.923 kb on + strand, within Echvi_4153 at 4971.952 kb on - strand, within Echvi_4153 at 4971.974 kb on + strand, within Echvi_4153 at 4971.975 kb on - strand, within Echvi_4153 at 4971.975 kb on - strand, within Echvi_4153 at 4971.986 kb on + strand, within Echvi_4153 at 4971.994 kb on + strand, within Echvi_4153 at 4971.994 kb on + strand, within Echvi_4153 at 4971.994 kb on + strand, within Echvi_4153 at 4971.995 kb on - strand, within Echvi_4153 at 4971.995 kb on - strand, within Echvi_4153 at 4971.995 kb on - strand, within Echvi_4153 at 4971.997 kb on + strand, within Echvi_4153 at 4971.998 kb on - strand, within Echvi_4153 at 4971.998 kb on - strand, within Echvi_4153 at 4971.998 kb on - strand, within Echvi_4153 at 4972.001 kb on - strand, within Echvi_4153 at 4972.003 kb on + strand, within Echvi_4153 at 4972.003 kb on + strand, within Echvi_4153 at 4972.006 kb on + strand, within Echvi_4153 at 4972.006 kb on + strand, within Echvi_4153 at 4972.007 kb on - strand, within Echvi_4153 at 4972.007 kb on - strand, within Echvi_4153 at 4972.007 kb on - strand, within Echvi_4153 at 4972.007 kb on - strand, within Echvi_4153 at 4972.105 kb on - strand, within Echvi_4153 at 4972.143 kb on - strand, within Echvi_4153 at 4972.161 kb on + strand, within Echvi_4153 at 4972.222 kb on + strand, within Echvi_4153 at 4972.222 kb on + strand, within Echvi_4153 at 4972.249 kb on + strand, within Echvi_4153 at 4972.249 kb on + strand, within Echvi_4153
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 4,970,323 + Echvi_4152 0.30 +0.7 4,970,323 + Echvi_4152 0.30 -0.4 4,970,323 + Echvi_4152 0.30 +0.3 4,970,472 + Echvi_4152 0.41 -1.8 4,970,526 - Echvi_4152 0.45 +0.5 4,970,549 + Echvi_4152 0.46 +0.8 4,970,550 - Echvi_4152 0.46 +1.8 4,970,550 - Echvi_4152 0.46 -0.6 4,970,550 - Echvi_4152 0.46 -0.2 4,970,570 + Echvi_4152 0.48 +1.0 4,970,571 - Echvi_4152 0.48 -0.1 4,970,580 + Echvi_4152 0.49 -1.5 4,970,580 + Echvi_4152 0.49 +0.2 4,970,582 + Echvi_4152 0.49 -0.1 4,970,583 - Echvi_4152 0.49 +0.5 4,970,583 - Echvi_4152 0.49 -0.1 4,970,583 - Echvi_4152 0.49 -0.5 4,970,583 - Echvi_4152 0.49 -1.2 4,970,626 + Echvi_4152 0.52 -0.8 4,970,636 + Echvi_4152 0.52 -0.9 4,970,637 - Echvi_4152 0.53 +0.2 4,970,656 + Echvi_4152 0.54 -1.4 4,970,657 - Echvi_4152 0.54 -0.3 4,970,657 - Echvi_4152 0.54 -0.4 4,970,665 + Echvi_4152 0.55 +0.4 4,970,668 - Echvi_4152 0.55 -2.1 4,970,742 + Echvi_4152 0.60 -1.1 4,970,742 + +1.2 4,970,743 - Echvi_4152 0.60 -0.7 4,970,792 - Echvi_4152 0.64 +0.6 4,970,888 - Echvi_4152 0.70 -0.0 4,970,888 - Echvi_4152 0.70 +0.1 4,970,892 - Echvi_4152 0.71 -1.8 4,970,921 + Echvi_4152 0.73 -0.7 4,970,931 - Echvi_4152 0.73 -0.3 4,970,945 + Echvi_4152 0.74 -0.3 4,970,945 + Echvi_4152 0.74 -0.8 4,970,945 + Echvi_4152 0.74 -0.3 4,971,299 + -1.3 4,971,340 + +0.7 4,971,340 + -1.8 4,971,341 - -0.4 4,971,341 - +0.4 4,971,343 - +0.7 4,971,344 + +0.2 4,971,456 + -0.2 4,971,475 + -0.1 4,971,597 + Echvi_4153 0.16 -2.1 4,971,598 - Echvi_4153 0.16 -1.3 4,971,598 - Echvi_4153 0.16 -0.1 4,971,606 + Echvi_4153 0.17 +0.1 4,971,618 + Echvi_4153 0.18 -0.4 4,971,636 + Echvi_4153 0.19 -0.0 4,971,693 + Echvi_4153 0.22 -0.1 4,971,714 + Echvi_4153 0.24 -0.6 4,971,715 - Echvi_4153 0.24 -1.4 4,971,791 + Echvi_4153 0.28 +0.3 4,971,791 + Echvi_4153 0.28 +1.2 4,971,792 - Echvi_4153 0.29 -1.8 4,971,819 + Echvi_4153 0.30 -0.2 4,971,923 + Echvi_4153 0.37 +2.0 4,971,923 + Echvi_4153 0.37 -0.4 4,971,952 - Echvi_4153 0.39 -1.1 4,971,974 + Echvi_4153 0.40 +1.2 4,971,975 - Echvi_4153 0.40 -0.6 4,971,975 - Echvi_4153 0.40 +1.2 4,971,986 + Echvi_4153 0.41 -0.3 4,971,994 + Echvi_4153 0.41 -0.8 4,971,994 + Echvi_4153 0.41 -0.3 4,971,994 + Echvi_4153 0.41 +0.2 4,971,995 - Echvi_4153 0.41 -0.4 4,971,995 - Echvi_4153 0.41 +1.0 4,971,995 - Echvi_4153 0.41 -1.0 4,971,997 + Echvi_4153 0.41 -0.6 4,971,998 - Echvi_4153 0.42 -0.3 4,971,998 - Echvi_4153 0.42 -0.1 4,971,998 - Echvi_4153 0.42 -1.1 4,972,001 - Echvi_4153 0.42 +2.0 4,972,003 + Echvi_4153 0.42 -0.2 4,972,003 + Echvi_4153 0.42 +1.7 4,972,006 + Echvi_4153 0.42 +0.9 4,972,006 + Echvi_4153 0.42 +1.7 4,972,007 - Echvi_4153 0.42 -0.2 4,972,007 - Echvi_4153 0.42 +0.2 4,972,007 - Echvi_4153 0.42 -0.4 4,972,007 - Echvi_4153 0.42 -0.3 4,972,105 - Echvi_4153 0.48 -0.8 4,972,143 - Echvi_4153 0.51 +0.3 4,972,161 + Echvi_4153 0.52 -1.2 4,972,222 + Echvi_4153 0.56 +0.1 4,972,222 + Echvi_4153 0.56 +0.7 4,972,249 + Echvi_4153 0.57 -0.1 4,972,249 + Echvi_4153 0.57 -0.4
Or see this region's nucleotide sequence