Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3750 and Echvi_3751 are separated by 45 nucleotides Echvi_3751 and Echvi_3752 are separated by 20 nucleotides
Echvi_3750: Echvi_3750 - hypothetical protein, at 4,469,223 to 4,470,497
_3750
Echvi_3751: Echvi_3751 - SusD family., at 4,470,543 to 4,472,207
_3751
Echvi_3752: Echvi_3752 - TonB-linked outer membrane protein, SusC/RagA family, at 4,472,228 to 4,475,386
_3752
Position (kb)
4470
4471
4472
4473 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4469.553 kb on + strand, within Echvi_3750 at 4469.553 kb on + strand, within Echvi_3750 at 4469.554 kb on - strand, within Echvi_3750 at 4469.554 kb on - strand, within Echvi_3750 at 4469.554 kb on - strand, within Echvi_3750 at 4469.587 kb on + strand, within Echvi_3750 at 4469.587 kb on + strand, within Echvi_3750 at 4469.587 kb on + strand, within Echvi_3750 at 4469.587 kb on + strand, within Echvi_3750 at 4469.587 kb on + strand, within Echvi_3750 at 4469.588 kb on - strand, within Echvi_3750 at 4469.591 kb on + strand, within Echvi_3750 at 4469.705 kb on + strand, within Echvi_3750 at 4469.706 kb on - strand, within Echvi_3750 at 4469.747 kb on + strand, within Echvi_3750 at 4469.748 kb on - strand, within Echvi_3750 at 4469.979 kb on + strand, within Echvi_3750 at 4469.982 kb on - strand, within Echvi_3750 at 4470.019 kb on + strand, within Echvi_3750 at 4470.020 kb on - strand, within Echvi_3750 at 4470.159 kb on + strand, within Echvi_3750 at 4470.229 kb on + strand, within Echvi_3750 at 4470.332 kb on + strand, within Echvi_3750 at 4470.362 kb on + strand, within Echvi_3750 at 4470.363 kb on - strand, within Echvi_3750 at 4470.399 kb on + strand at 4470.399 kb on + strand at 4470.400 kb on - strand at 4470.400 kb on - strand at 4470.400 kb on - strand at 4470.400 kb on - strand at 4470.461 kb on + strand at 4470.462 kb on - strand at 4470.544 kb on + strand at 4470.557 kb on + strand at 4470.565 kb on + strand at 4470.566 kb on - strand at 4470.571 kb on - strand at 4470.655 kb on + strand at 4470.669 kb on - strand at 4470.687 kb on + strand at 4470.687 kb on + strand at 4470.724 kb on + strand, within Echvi_3751 at 4470.752 kb on + strand, within Echvi_3751 at 4470.767 kb on - strand, within Echvi_3751 at 4470.767 kb on - strand, within Echvi_3751 at 4470.784 kb on + strand, within Echvi_3751 at 4470.785 kb on - strand, within Echvi_3751 at 4470.808 kb on + strand, within Echvi_3751 at 4470.857 kb on + strand, within Echvi_3751 at 4470.914 kb on + strand, within Echvi_3751 at 4470.914 kb on + strand, within Echvi_3751 at 4470.914 kb on + strand, within Echvi_3751 at 4470.914 kb on + strand, within Echvi_3751 at 4470.915 kb on - strand, within Echvi_3751 at 4470.915 kb on - strand, within Echvi_3751 at 4470.916 kb on + strand, within Echvi_3751 at 4470.919 kb on + strand, within Echvi_3751 at 4470.919 kb on + strand, within Echvi_3751 at 4470.964 kb on + strand, within Echvi_3751 at 4470.973 kb on + strand, within Echvi_3751 at 4470.991 kb on - strand, within Echvi_3751 at 4470.993 kb on + strand, within Echvi_3751 at 4470.994 kb on - strand, within Echvi_3751 at 4470.995 kb on + strand, within Echvi_3751 at 4470.996 kb on - strand, within Echvi_3751 at 4470.996 kb on - strand, within Echvi_3751 at 4470.996 kb on - strand, within Echvi_3751 at 4470.996 kb on - strand, within Echvi_3751 at 4470.997 kb on + strand, within Echvi_3751 at 4470.997 kb on + strand at 4470.997 kb on + strand, within Echvi_3751 at 4470.997 kb on + strand, within Echvi_3751 at 4470.997 kb on + strand, within Echvi_3751 at 4470.998 kb on - strand, within Echvi_3751 at 4470.998 kb on - strand, within Echvi_3751 at 4470.998 kb on - strand, within Echvi_3751 at 4471.001 kb on + strand, within Echvi_3751 at 4471.001 kb on + strand, within Echvi_3751 at 4471.001 kb on + strand, within Echvi_3751 at 4471.001 kb on + strand, within Echvi_3751 at 4471.002 kb on - strand, within Echvi_3751 at 4471.063 kb on + strand, within Echvi_3751 at 4471.168 kb on + strand, within Echvi_3751 at 4471.175 kb on - strand, within Echvi_3751 at 4471.175 kb on - strand, within Echvi_3751 at 4471.208 kb on + strand, within Echvi_3751 at 4471.209 kb on - strand, within Echvi_3751 at 4471.266 kb on - strand, within Echvi_3751 at 4471.353 kb on + strand, within Echvi_3751 at 4471.353 kb on + strand, within Echvi_3751 at 4471.354 kb on - strand, within Echvi_3751 at 4471.369 kb on + strand, within Echvi_3751 at 4471.370 kb on - strand, within Echvi_3751 at 4471.407 kb on - strand, within Echvi_3751 at 4471.486 kb on + strand, within Echvi_3751 at 4471.631 kb on - strand, within Echvi_3751 at 4471.649 kb on + strand, within Echvi_3751 at 4471.709 kb on + strand, within Echvi_3751 at 4471.709 kb on + strand, within Echvi_3751 at 4471.710 kb on - strand, within Echvi_3751 at 4471.775 kb on + strand, within Echvi_3751 at 4471.859 kb on + strand, within Echvi_3751 at 4471.860 kb on - strand, within Echvi_3751 at 4471.929 kb on - strand, within Echvi_3751 at 4472.009 kb on + strand, within Echvi_3751 at 4472.009 kb on + strand, within Echvi_3751 at 4472.009 kb on + strand, within Echvi_3751 at 4472.016 kb on - strand, within Echvi_3751 at 4472.028 kb on + strand, within Echvi_3751 at 4472.028 kb on + strand, within Echvi_3751 at 4472.029 kb on - strand, within Echvi_3751 at 4472.033 kb on + strand, within Echvi_3751 at 4472.033 kb on + strand, within Echvi_3751 at 4472.033 kb on + strand, within Echvi_3751 at 4472.034 kb on - strand, within Echvi_3751 at 4472.038 kb on + strand, within Echvi_3751 at 4472.039 kb on - strand, within Echvi_3751 at 4472.040 kb on + strand, within Echvi_3751 at 4472.061 kb on + strand at 4472.320 kb on + strand at 4472.331 kb on + strand at 4472.332 kb on - strand at 4472.352 kb on + strand at 4472.352 kb on + strand at 4472.361 kb on + strand at 4472.454 kb on + strand at 4472.454 kb on + strand at 4472.459 kb on + strand at 4472.459 kb on + strand at 4472.459 kb on + strand at 4472.459 kb on + strand at 4472.459 kb on + strand at 4472.460 kb on - strand at 4472.460 kb on - strand at 4472.480 kb on + strand at 4472.480 kb on + strand at 4472.480 kb on + strand at 4472.480 kb on + strand at 4472.480 kb on + strand at 4472.481 kb on - strand at 4472.481 kb on - strand at 4472.484 kb on + strand at 4472.485 kb on - strand at 4472.506 kb on + strand at 4472.507 kb on - strand at 4472.639 kb on + strand, within Echvi_3752 at 4472.640 kb on - strand, within Echvi_3752 at 4472.662 kb on + strand, within Echvi_3752 at 4472.674 kb on + strand, within Echvi_3752 at 4472.674 kb on + strand, within Echvi_3752 at 4472.678 kb on - strand, within Echvi_3752 at 4472.692 kb on - strand, within Echvi_3752 at 4472.695 kb on + strand, within Echvi_3752 at 4472.695 kb on + strand, within Echvi_3752 at 4472.695 kb on + strand, within Echvi_3752 at 4472.696 kb on - strand, within Echvi_3752 at 4472.729 kb on + strand, within Echvi_3752 at 4472.729 kb on + strand, within Echvi_3752 at 4472.730 kb on - strand, within Echvi_3752 at 4472.730 kb on - strand, within Echvi_3752 at 4472.730 kb on - strand, within Echvi_3752 at 4472.730 kb on - strand, within Echvi_3752 at 4472.731 kb on + strand, within Echvi_3752 at 4472.731 kb on + strand, within Echvi_3752 at 4472.751 kb on + strand, within Echvi_3752 at 4472.854 kb on - strand, within Echvi_3752 at 4472.857 kb on + strand, within Echvi_3752 at 4472.857 kb on + strand, within Echvi_3752 at 4472.857 kb on + strand, within Echvi_3752 at 4472.857 kb on + strand, within Echvi_3752 at 4472.857 kb on + strand, within Echvi_3752 at 4472.857 kb on + strand, within Echvi_3752 at 4472.858 kb on - strand, within Echvi_3752 at 4472.876 kb on - strand, within Echvi_3752 at 4472.876 kb on - strand, within Echvi_3752 at 4472.911 kb on + strand, within Echvi_3752 at 4472.912 kb on - strand, within Echvi_3752 at 4472.967 kb on + strand, within Echvi_3752 at 4472.968 kb on - strand, within Echvi_3752 at 4472.968 kb on - strand, within Echvi_3752 at 4472.968 kb on - strand, within Echvi_3752 at 4472.979 kb on + strand, within Echvi_3752 at 4472.979 kb on + strand, within Echvi_3752 at 4473.034 kb on - strand, within Echvi_3752 at 4473.034 kb on - strand, within Echvi_3752 at 4473.092 kb on - strand, within Echvi_3752 at 4473.092 kb on - strand, within Echvi_3752 at 4473.106 kb on + strand, within Echvi_3752 at 4473.133 kb on + strand, within Echvi_3752 at 4473.134 kb on - strand, within Echvi_3752 at 4473.197 kb on + strand, within Echvi_3752 at 4473.197 kb on + strand, within Echvi_3752 at 4473.198 kb on - strand, within Echvi_3752
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 4,469,553 + Echvi_3750 0.26 +0.2 4,469,553 + Echvi_3750 0.26 -1.7 4,469,554 - Echvi_3750 0.26 +0.1 4,469,554 - Echvi_3750 0.26 +0.2 4,469,554 - Echvi_3750 0.26 +0.6 4,469,587 + Echvi_3750 0.29 -0.6 4,469,587 + Echvi_3750 0.29 -2.2 4,469,587 + Echvi_3750 0.29 -1.1 4,469,587 + Echvi_3750 0.29 +1.8 4,469,587 + Echvi_3750 0.29 +1.0 4,469,588 - Echvi_3750 0.29 +1.0 4,469,591 + Echvi_3750 0.29 +1.4 4,469,705 + Echvi_3750 0.38 +0.1 4,469,706 - Echvi_3750 0.38 -0.0 4,469,747 + Echvi_3750 0.41 -1.4 4,469,748 - Echvi_3750 0.41 +3.2 4,469,979 + Echvi_3750 0.59 -0.4 4,469,982 - Echvi_3750 0.60 +0.4 4,470,019 + Echvi_3750 0.62 -2.0 4,470,020 - Echvi_3750 0.63 -0.4 4,470,159 + Echvi_3750 0.73 +0.8 4,470,229 + Echvi_3750 0.79 -0.4 4,470,332 + Echvi_3750 0.87 +1.2 4,470,362 + Echvi_3750 0.89 -0.3 4,470,363 - Echvi_3750 0.89 +0.8 4,470,399 + +0.5 4,470,399 + +0.0 4,470,400 - -1.1 4,470,400 - -0.8 4,470,400 - -0.2 4,470,400 - -0.2 4,470,461 + -1.5 4,470,462 - -0.2 4,470,544 + -1.1 4,470,557 + +0.4 4,470,565 + +0.6 4,470,566 - -0.8 4,470,571 - -1.0 4,470,655 + -0.1 4,470,669 - -1.0 4,470,687 + +0.6 4,470,687 + +0.0 4,470,724 + Echvi_3751 0.11 -0.3 4,470,752 + Echvi_3751 0.13 +0.8 4,470,767 - Echvi_3751 0.13 +1.1 4,470,767 - Echvi_3751 0.13 -0.1 4,470,784 + Echvi_3751 0.14 -0.5 4,470,785 - Echvi_3751 0.15 +1.1 4,470,808 + Echvi_3751 0.16 -0.8 4,470,857 + Echvi_3751 0.19 -0.7 4,470,914 + Echvi_3751 0.22 -0.6 4,470,914 + Echvi_3751 0.22 -0.8 4,470,914 + Echvi_3751 0.22 +0.5 4,470,914 + Echvi_3751 0.22 +0.0 4,470,915 - Echvi_3751 0.22 -0.5 4,470,915 - Echvi_3751 0.22 -0.4 4,470,916 + Echvi_3751 0.22 -0.5 4,470,919 + Echvi_3751 0.23 -0.1 4,470,919 + Echvi_3751 0.23 -0.3 4,470,964 + Echvi_3751 0.25 +0.6 4,470,973 + Echvi_3751 0.26 +0.5 4,470,991 - Echvi_3751 0.27 +0.9 4,470,993 + Echvi_3751 0.27 -0.1 4,470,994 - Echvi_3751 0.27 -2.4 4,470,995 + Echvi_3751 0.27 +0.3 4,470,996 - Echvi_3751 0.27 +0.9 4,470,996 - Echvi_3751 0.27 -1.7 4,470,996 - Echvi_3751 0.27 -0.4 4,470,996 - Echvi_3751 0.27 +1.5 4,470,997 + Echvi_3751 0.27 +0.9 4,470,997 + +2.8 4,470,997 + Echvi_3751 0.27 +1.0 4,470,997 + Echvi_3751 0.27 -0.9 4,470,997 + Echvi_3751 0.27 -1.8 4,470,998 - Echvi_3751 0.27 +1.5 4,470,998 - Echvi_3751 0.27 +2.2 4,470,998 - Echvi_3751 0.27 +1.4 4,471,001 + Echvi_3751 0.28 +1.2 4,471,001 + Echvi_3751 0.28 +1.0 4,471,001 + Echvi_3751 0.28 +0.3 4,471,001 + Echvi_3751 0.28 +0.1 4,471,002 - Echvi_3751 0.28 -0.5 4,471,063 + Echvi_3751 0.31 +0.0 4,471,168 + Echvi_3751 0.38 +1.8 4,471,175 - Echvi_3751 0.38 +1.0 4,471,175 - Echvi_3751 0.38 -0.1 4,471,208 + Echvi_3751 0.40 +0.6 4,471,209 - Echvi_3751 0.40 +0.5 4,471,266 - Echvi_3751 0.43 -0.4 4,471,353 + Echvi_3751 0.49 +0.0 4,471,353 + Echvi_3751 0.49 +0.6 4,471,354 - Echvi_3751 0.49 +0.4 4,471,369 + Echvi_3751 0.50 +0.6 4,471,370 - Echvi_3751 0.50 -0.4 4,471,407 - Echvi_3751 0.52 -2.2 4,471,486 + Echvi_3751 0.57 +0.0 4,471,631 - Echvi_3751 0.65 +2.1 4,471,649 + Echvi_3751 0.66 -0.0 4,471,709 + Echvi_3751 0.70 +0.1 4,471,709 + Echvi_3751 0.70 +0.0 4,471,710 - Echvi_3751 0.70 +0.8 4,471,775 + Echvi_3751 0.74 -1.4 4,471,859 + Echvi_3751 0.79 +0.4 4,471,860 - Echvi_3751 0.79 +0.2 4,471,929 - Echvi_3751 0.83 +1.1 4,472,009 + Echvi_3751 0.88 -0.0 4,472,009 + Echvi_3751 0.88 -0.2 4,472,009 + Echvi_3751 0.88 +0.6 4,472,016 - Echvi_3751 0.88 -0.9 4,472,028 + Echvi_3751 0.89 -1.5 4,472,028 + Echvi_3751 0.89 -0.0 4,472,029 - Echvi_3751 0.89 +0.1 4,472,033 + Echvi_3751 0.89 +0.0 4,472,033 + Echvi_3751 0.89 +0.1 4,472,033 + Echvi_3751 0.89 +0.2 4,472,034 - Echvi_3751 0.90 -0.9 4,472,038 + Echvi_3751 0.90 -0.2 4,472,039 - Echvi_3751 0.90 -0.6 4,472,040 + Echvi_3751 0.90 -0.1 4,472,061 + -0.6 4,472,320 + +2.2 4,472,331 + -1.0 4,472,332 - +0.0 4,472,352 + +0.6 4,472,352 + -0.2 4,472,361 + -0.2 4,472,454 + -0.6 4,472,454 + -0.6 4,472,459 + +0.9 4,472,459 + -0.1 4,472,459 + +0.5 4,472,459 + -0.3 4,472,459 + +2.2 4,472,460 - +0.2 4,472,460 - +1.4 4,472,480 + +0.2 4,472,480 + +0.9 4,472,480 + +0.6 4,472,480 + +0.9 4,472,480 + -1.9 4,472,481 - +0.9 4,472,481 - +0.8 4,472,484 + +0.6 4,472,485 - +0.5 4,472,506 + +0.5 4,472,507 - +0.1 4,472,639 + Echvi_3752 0.13 +0.1 4,472,640 - Echvi_3752 0.13 -0.2 4,472,662 + Echvi_3752 0.14 +0.6 4,472,674 + Echvi_3752 0.14 -1.1 4,472,674 + Echvi_3752 0.14 -2.5 4,472,678 - Echvi_3752 0.14 -0.7 4,472,692 - Echvi_3752 0.15 -2.2 4,472,695 + Echvi_3752 0.15 -0.9 4,472,695 + Echvi_3752 0.15 -0.2 4,472,695 + Echvi_3752 0.15 -1.7 4,472,696 - Echvi_3752 0.15 +1.2 4,472,729 + Echvi_3752 0.16 -1.3 4,472,729 + Echvi_3752 0.16 -0.8 4,472,730 - Echvi_3752 0.16 -0.5 4,472,730 - Echvi_3752 0.16 -0.7 4,472,730 - Echvi_3752 0.16 -0.6 4,472,730 - Echvi_3752 0.16 +0.9 4,472,731 + Echvi_3752 0.16 -1.3 4,472,731 + Echvi_3752 0.16 -0.3 4,472,751 + Echvi_3752 0.17 -1.6 4,472,854 - Echvi_3752 0.20 +1.2 4,472,857 + Echvi_3752 0.20 +0.3 4,472,857 + Echvi_3752 0.20 +0.9 4,472,857 + Echvi_3752 0.20 +1.2 4,472,857 + Echvi_3752 0.20 -0.3 4,472,857 + Echvi_3752 0.20 +0.8 4,472,857 + Echvi_3752 0.20 +1.2 4,472,858 - Echvi_3752 0.20 +0.8 4,472,876 - Echvi_3752 0.21 -0.0 4,472,876 - Echvi_3752 0.21 -0.4 4,472,911 + Echvi_3752 0.22 +0.2 4,472,912 - Echvi_3752 0.22 -0.5 4,472,967 + Echvi_3752 0.23 -1.0 4,472,968 - Echvi_3752 0.23 +0.2 4,472,968 - Echvi_3752 0.23 +0.1 4,472,968 - Echvi_3752 0.23 -1.0 4,472,979 + Echvi_3752 0.24 -1.2 4,472,979 + Echvi_3752 0.24 -1.4 4,473,034 - Echvi_3752 0.26 +1.6 4,473,034 - Echvi_3752 0.26 -0.2 4,473,092 - Echvi_3752 0.27 +0.8 4,473,092 - Echvi_3752 0.27 -0.6 4,473,106 + Echvi_3752 0.28 -0.4 4,473,133 + Echvi_3752 0.29 +0.2 4,473,134 - Echvi_3752 0.29 -2.4 4,473,197 + Echvi_3752 0.31 +0.8 4,473,197 + Echvi_3752 0.31 -1.2 4,473,198 - Echvi_3752 0.31 +0.1
Or see this region's nucleotide sequence