Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3646

Experiment: L-Methionine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_3645 and Echvi_3646 overlap by 167 nucleotidesEchvi_3646 and Echvi_3647 are separated by 153 nucleotides Echvi_3645: Echvi_3645 - Isocitrate dehydrogenase kinase/phosphatase, at 4,331,179 to 4,332,906 _3645 Echvi_3646: Echvi_3646 - hypothetical protein, at 4,332,740 to 4,333,108 _3646 Echvi_3647: Echvi_3647 - hypothetical protein, at 4,333,262 to 4,333,891 _3647 Position (kb) 4332 4333 4334Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4331.740 kb on - strand, within Echvi_3645at 4331.745 kb on - strand, within Echvi_3645at 4331.745 kb on - strand, within Echvi_3645at 4331.772 kb on - strand, within Echvi_3645at 4331.794 kb on - strand, within Echvi_3645at 4331.803 kb on + strand, within Echvi_3645at 4331.807 kb on + strand, within Echvi_3645at 4331.808 kb on - strand, within Echvi_3645at 4331.881 kb on + strand, within Echvi_3645at 4331.881 kb on + strand, within Echvi_3645at 4331.881 kb on + strand, within Echvi_3645at 4331.912 kb on + strand, within Echvi_3645at 4331.912 kb on + strand, within Echvi_3645at 4331.932 kb on + strand, within Echvi_3645at 4331.932 kb on + strand, within Echvi_3645at 4331.933 kb on - strand, within Echvi_3645at 4331.944 kb on + strand, within Echvi_3645at 4331.945 kb on - strand, within Echvi_3645at 4332.009 kb on + strand, within Echvi_3645at 4332.028 kb on + strand, within Echvi_3645at 4332.029 kb on - strand, within Echvi_3645at 4332.029 kb on - strand, within Echvi_3645at 4332.071 kb on - strand, within Echvi_3645at 4332.102 kb on + strand, within Echvi_3645at 4332.103 kb on - strand, within Echvi_3645at 4332.103 kb on - strand, within Echvi_3645at 4332.103 kb on - strand, within Echvi_3645at 4332.115 kb on - strand, within Echvi_3645at 4332.115 kb on - strand, within Echvi_3645at 4332.143 kb on + strand, within Echvi_3645at 4332.153 kb on - strand, within Echvi_3645at 4332.156 kb on + strand, within Echvi_3645at 4332.157 kb on - strand, within Echvi_3645at 4332.170 kb on - strand, within Echvi_3645at 4332.170 kb on - strand, within Echvi_3645at 4332.171 kb on + strand, within Echvi_3645at 4332.171 kb on + strand, within Echvi_3645at 4332.172 kb on - strand, within Echvi_3645at 4332.172 kb on - strand, within Echvi_3645at 4332.172 kb on - strand, within Echvi_3645at 4332.172 kb on - strand, within Echvi_3645at 4332.172 kb on - strand, within Echvi_3645at 4332.183 kb on + strand, within Echvi_3645at 4332.183 kb on + strand, within Echvi_3645at 4332.189 kb on - strand, within Echvi_3645at 4332.236 kb on + strand, within Echvi_3645at 4332.243 kb on + strand, within Echvi_3645at 4332.381 kb on + strand, within Echvi_3645at 4332.382 kb on - strand, within Echvi_3645at 4332.418 kb on + strand, within Echvi_3645at 4332.447 kb on + strand, within Echvi_3645at 4332.448 kb on - strand, within Echvi_3645at 4332.451 kb on + strand, within Echvi_3645at 4332.452 kb on - strand, within Echvi_3645at 4332.466 kb on - strand, within Echvi_3645at 4332.466 kb on - strand, within Echvi_3645at 4332.550 kb on - strand, within Echvi_3645at 4332.604 kb on + strand, within Echvi_3645at 4332.605 kb on - strand, within Echvi_3645at 4332.605 kb on - strand, within Echvi_3645at 4332.676 kb on + strand, within Echvi_3645at 4332.695 kb on - strand, within Echvi_3645at 4332.741 kb on + strandat 4332.761 kb on + strandat 4332.762 kb on - strandat 4332.786 kb on + strandat 4332.874 kb on + strandat 4332.902 kb on + strandat 4332.904 kb on + strandat 4332.904 kb on + strandat 4332.905 kb on - strandat 4332.905 kb on - strandat 4332.905 kb on - strandat 4332.909 kb on - strand, within Echvi_3646at 4332.913 kb on + strand, within Echvi_3646at 4332.914 kb on - strand, within Echvi_3646at 4332.917 kb on - strand, within Echvi_3646at 4332.926 kb on + strand, within Echvi_3646at 4332.929 kb on + strand, within Echvi_3646at 4332.929 kb on + strand, within Echvi_3646at 4332.930 kb on - strand, within Echvi_3646at 4332.930 kb on - strand, within Echvi_3646at 4332.932 kb on + strand, within Echvi_3646at 4332.932 kb on + strand, within Echvi_3646at 4332.932 kb on + strand, within Echvi_3646at 4332.933 kb on - strand, within Echvi_3646at 4332.933 kb on - strand, within Echvi_3646at 4332.933 kb on - strand, within Echvi_3646at 4332.935 kb on + strand, within Echvi_3646at 4332.935 kb on + strand, within Echvi_3646at 4332.935 kb on + strand, within Echvi_3646at 4332.935 kb on + strand, within Echvi_3646at 4332.935 kb on + strand, within Echvi_3646at 4332.935 kb on + strand, within Echvi_3646at 4332.936 kb on - strand, within Echvi_3646at 4332.936 kb on - strand, within Echvi_3646at 4332.936 kb on - strand, within Echvi_3646at 4332.936 kb on - strand, within Echvi_3646at 4332.936 kb on - strand, within Echvi_3646at 4332.992 kb on - strand, within Echvi_3646at 4333.093 kb on + strandat 4333.155 kb on + strandat 4333.155 kb on + strandat 4333.168 kb on + strandat 4333.224 kb on + strandat 4333.225 kb on - strandat 4333.225 kb on - strandat 4333.235 kb on + strandat 4333.244 kb on + strandat 4333.278 kb on + strandat 4333.278 kb on + strandat 4333.278 kb on + strandat 4333.279 kb on - strandat 4333.344 kb on - strand, within Echvi_3647at 4333.344 kb on - strand, within Echvi_3647at 4333.344 kb on - strand, within Echvi_3647at 4333.376 kb on + strand, within Echvi_3647at 4333.377 kb on - strand, within Echvi_3647at 4333.403 kb on - strand, within Echvi_3647at 4333.403 kb on - strand, within Echvi_3647at 4333.433 kb on - strand, within Echvi_3647at 4333.461 kb on + strand, within Echvi_3647at 4333.488 kb on + strand, within Echvi_3647at 4333.488 kb on + strand, within Echvi_3647at 4333.489 kb on - strand, within Echvi_3647at 4333.489 kb on - strand, within Echvi_3647at 4333.502 kb on - strand, within Echvi_3647at 4333.516 kb on + strand, within Echvi_3647at 4333.517 kb on - strand, within Echvi_3647at 4333.551 kb on - strand, within Echvi_3647at 4333.551 kb on - strand, within Echvi_3647at 4333.703 kb on + strand, within Echvi_3647at 4333.703 kb on + strand, within Echvi_3647at 4333.703 kb on + strand, within Echvi_3647at 4333.706 kb on + strand, within Echvi_3647at 4333.733 kb on + strand, within Echvi_3647at 4333.733 kb on + strand, within Echvi_3647at 4333.733 kb on + strand, within Echvi_3647at 4333.734 kb on - strand, within Echvi_3647at 4333.734 kb on - strand, within Echvi_3647at 4333.746 kb on - strand, within Echvi_3647at 4333.775 kb on + strand, within Echvi_3647at 4333.777 kb on + strand, within Echvi_3647at 4333.807 kb on + strand, within Echvi_3647at 4333.808 kb on - strand, within Echvi_3647at 4333.810 kb on + strand, within Echvi_3647at 4333.810 kb on + strand, within Echvi_3647at 4333.810 kb on + strand, within Echvi_3647at 4333.811 kb on - strand, within Echvi_3647at 4333.813 kb on + strand, within Echvi_3647at 4333.825 kb on - strand, within Echvi_3647at 4333.840 kb on + strandat 4333.841 kb on - strandat 4333.877 kb on + strandat 4333.877 kb on + strandat 4333.877 kb on + strandat 4333.877 kb on + strandat 4333.878 kb on - strandat 4333.878 kb on - strandat 4333.878 kb on - strandat 4333.878 kb on - strandat 4333.878 kb on - strandat 4333.878 kb on - strandat 4333.878 kb on - strandat 4333.879 kb on + strandat 4333.880 kb on - strandat 4333.883 kb on + strandat 4333.947 kb on - strandat 4333.956 kb on - strandat 4333.964 kb on + strandat 4333.968 kb on + strandat 4333.974 kb on + strandat 4333.987 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Methionine (N)
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4,331,740 - Echvi_3645 0.32 +0.4
4,331,745 - Echvi_3645 0.33 -0.4
4,331,745 - Echvi_3645 0.33 +0.0
4,331,772 - Echvi_3645 0.34 -1.0
4,331,794 - Echvi_3645 0.36 -0.7
4,331,803 + Echvi_3645 0.36 -0.4
4,331,807 + Echvi_3645 0.36 +0.5
4,331,808 - Echvi_3645 0.36 -0.5
4,331,881 + Echvi_3645 0.41 -0.5
4,331,881 + Echvi_3645 0.41 -1.1
4,331,881 + Echvi_3645 0.41 -2.0
4,331,912 + Echvi_3645 0.42 +1.2
4,331,912 + Echvi_3645 0.42 +1.1
4,331,932 + Echvi_3645 0.44 -0.4
4,331,932 + Echvi_3645 0.44 -1.5
4,331,933 - Echvi_3645 0.44 +0.4
4,331,944 + Echvi_3645 0.44 -0.1
4,331,945 - Echvi_3645 0.44 -0.4
4,332,009 + Echvi_3645 0.48 -0.4
4,332,028 + Echvi_3645 0.49 -1.1
4,332,029 - Echvi_3645 0.49 -0.4
4,332,029 - Echvi_3645 0.49 +0.1
4,332,071 - Echvi_3645 0.52 -0.7
4,332,102 + Echvi_3645 0.53 -0.8
4,332,103 - Echvi_3645 0.53 +0.3
4,332,103 - Echvi_3645 0.53 -0.3
4,332,103 - Echvi_3645 0.53 -2.1
4,332,115 - Echvi_3645 0.54 -0.6
4,332,115 - Echvi_3645 0.54 -1.2
4,332,143 + Echvi_3645 0.56 +0.9
4,332,153 - Echvi_3645 0.56 -0.4
4,332,156 + Echvi_3645 0.57 -0.5
4,332,157 - Echvi_3645 0.57 -0.7
4,332,170 - Echvi_3645 0.57 -1.3
4,332,170 - Echvi_3645 0.57 -1.1
4,332,171 + Echvi_3645 0.57 +0.7
4,332,171 + Echvi_3645 0.57 +0.4
4,332,172 - Echvi_3645 0.57 +0.9
4,332,172 - Echvi_3645 0.57 +0.7
4,332,172 - Echvi_3645 0.57 +1.5
4,332,172 - Echvi_3645 0.57 +2.2
4,332,172 - Echvi_3645 0.57 +0.8
4,332,183 + Echvi_3645 0.58 -0.2
4,332,183 + Echvi_3645 0.58 -0.4
4,332,189 - Echvi_3645 0.58 -1.0
4,332,236 + Echvi_3645 0.61 -1.4
4,332,243 + Echvi_3645 0.62 +0.7
4,332,381 + Echvi_3645 0.70 -0.9
4,332,382 - Echvi_3645 0.70 -0.8
4,332,418 + Echvi_3645 0.72 -0.4
4,332,447 + Echvi_3645 0.73 +0.3
4,332,448 - Echvi_3645 0.73 -1.0
4,332,451 + Echvi_3645 0.74 -2.1
4,332,452 - Echvi_3645 0.74 -0.4
4,332,466 - Echvi_3645 0.74 +0.0
4,332,466 - Echvi_3645 0.74 -0.8
4,332,550 - Echvi_3645 0.79 +1.2
4,332,604 + Echvi_3645 0.82 -0.5
4,332,605 - Echvi_3645 0.83 +0.2
4,332,605 - Echvi_3645 0.83 +0.2
4,332,676 + Echvi_3645 0.87 +1.2
4,332,695 - Echvi_3645 0.88 +0.2
4,332,741 + -0.4
4,332,761 + +1.1
4,332,762 - -0.6
4,332,786 + +0.5
4,332,874 + -0.3
4,332,902 + +0.4
4,332,904 + +0.0
4,332,904 + -0.2
4,332,905 - +0.1
4,332,905 - +1.4
4,332,905 - -1.3
4,332,909 - Echvi_3646 0.46 -0.2
4,332,913 + Echvi_3646 0.47 +0.1
4,332,914 - Echvi_3646 0.47 +0.1
4,332,917 - Echvi_3646 0.48 +0.4
4,332,926 + Echvi_3646 0.50 -0.5
4,332,929 + Echvi_3646 0.51 +1.2
4,332,929 + Echvi_3646 0.51 +0.0
4,332,930 - Echvi_3646 0.51 -0.6
4,332,930 - Echvi_3646 0.51 +1.0
4,332,932 + Echvi_3646 0.52 +0.7
4,332,932 + Echvi_3646 0.52 +0.3
4,332,932 + Echvi_3646 0.52 +0.7
4,332,933 - Echvi_3646 0.52 +0.2
4,332,933 - Echvi_3646 0.52 +0.2
4,332,933 - Echvi_3646 0.52 -0.0
4,332,935 + Echvi_3646 0.53 -1.1
4,332,935 + Echvi_3646 0.53 +0.1
4,332,935 + Echvi_3646 0.53 -0.4
4,332,935 + Echvi_3646 0.53 +0.6
4,332,935 + Echvi_3646 0.53 +0.6
4,332,935 + Echvi_3646 0.53 -0.3
4,332,936 - Echvi_3646 0.53 -0.3
4,332,936 - Echvi_3646 0.53 -0.2
4,332,936 - Echvi_3646 0.53 -0.9
4,332,936 - Echvi_3646 0.53 +0.1
4,332,936 - Echvi_3646 0.53 -1.0
4,332,992 - Echvi_3646 0.68 +2.2
4,333,093 + -1.1
4,333,155 + -0.2
4,333,155 + -0.7
4,333,168 + +0.2
4,333,224 + +0.8
4,333,225 - +0.7
4,333,225 - -1.0
4,333,235 + -1.1
4,333,244 + -1.2
4,333,278 + +1.5
4,333,278 + +0.5
4,333,278 + -0.3
4,333,279 - +0.2
4,333,344 - Echvi_3647 0.13 -2.5
4,333,344 - Echvi_3647 0.13 +0.7
4,333,344 - Echvi_3647 0.13 +1.5
4,333,376 + Echvi_3647 0.18 +0.5
4,333,377 - Echvi_3647 0.18 -1.9
4,333,403 - Echvi_3647 0.22 -0.5
4,333,403 - Echvi_3647 0.22 +0.9
4,333,433 - Echvi_3647 0.27 -0.8
4,333,461 + Echvi_3647 0.32 +0.7
4,333,488 + Echvi_3647 0.36 -1.4
4,333,488 + Echvi_3647 0.36 +3.2
4,333,489 - Echvi_3647 0.36 +2.6
4,333,489 - Echvi_3647 0.36 -2.4
4,333,502 - Echvi_3647 0.38 +0.8
4,333,516 + Echvi_3647 0.40 +0.2
4,333,517 - Echvi_3647 0.40 +0.8
4,333,551 - Echvi_3647 0.46 +0.5
4,333,551 - Echvi_3647 0.46 -1.1
4,333,703 + Echvi_3647 0.70 -0.6
4,333,703 + Echvi_3647 0.70 +0.7
4,333,703 + Echvi_3647 0.70 +0.5
4,333,706 + Echvi_3647 0.70 +1.1
4,333,733 + Echvi_3647 0.75 +0.5
4,333,733 + Echvi_3647 0.75 -0.0
4,333,733 + Echvi_3647 0.75 +1.3
4,333,734 - Echvi_3647 0.75 -0.5
4,333,734 - Echvi_3647 0.75 +0.2
4,333,746 - Echvi_3647 0.77 -1.0
4,333,775 + Echvi_3647 0.81 -0.7
4,333,777 + Echvi_3647 0.82 +0.2
4,333,807 + Echvi_3647 0.87 -0.1
4,333,808 - Echvi_3647 0.87 -0.4
4,333,810 + Echvi_3647 0.87 +0.3
4,333,810 + Echvi_3647 0.87 -0.6
4,333,810 + Echvi_3647 0.87 +0.4
4,333,811 - Echvi_3647 0.87 -0.2
4,333,813 + Echvi_3647 0.87 +0.1
4,333,825 - Echvi_3647 0.89 +0.3
4,333,840 + -1.6
4,333,841 - +0.5
4,333,877 + -0.1
4,333,877 + -0.4
4,333,877 + -2.4
4,333,877 + -1.0
4,333,878 - -0.0
4,333,878 - -1.5
4,333,878 - +1.4
4,333,878 - +0.2
4,333,878 - +0.8
4,333,878 - -0.9
4,333,878 - +0.5
4,333,879 + +1.3
4,333,880 - +0.1
4,333,883 + -1.0
4,333,947 - +1.0
4,333,956 - -0.5
4,333,964 + -0.1
4,333,968 + -1.0
4,333,974 + -0.0
4,333,987 + -0.3

Or see this region's nucleotide sequence