Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3426

Experiment: L-Methionine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_3425 and Echvi_3426 are separated by 89 nucleotidesEchvi_3426 and Echvi_3427 are separated by 24 nucleotidesEchvi_3427 and Echvi_3428 are separated by 109 nucleotides Echvi_3425: Echvi_3425 - threonyl-tRNA synthetase, at 4,057,564 to 4,059,513 _3425 Echvi_3426: Echvi_3426 - translation initiation factor IF-3, at 4,059,603 to 4,060,154 _3426 Echvi_3427: Echvi_3427 - ribosomal protein L35, at 4,060,179 to 4,060,373 _3427 Echvi_3428: Echvi_3428 - ribosomal protein L20, at 4,060,483 to 4,060,827 _3428 Position (kb) 4059 4060 4061Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4060.145 kb on + strandat 4060.167 kb on + strandat 4060.911 kb on + strandat 4060.926 kb on + strandat 4060.928 kb on + strandat 4060.931 kb on + strandat 4060.931 kb on + strandat 4060.932 kb on - strandat 4061.014 kb on + strandat 4061.015 kb on - strandat 4061.081 kb on + strandat 4061.093 kb on - strandat 4061.093 kb on - strandat 4061.093 kb on - strandat 4061.143 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Methionine (N)
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4,060,145 + -0.4
4,060,167 + +1.4
4,060,911 + +1.0
4,060,926 + +1.4
4,060,928 + +1.4
4,060,931 + +2.2
4,060,931 + +1.9
4,060,932 - -3.5
4,061,014 + +1.2
4,061,015 - -1.2
4,061,081 + +0.6
4,061,093 - +1.0
4,061,093 - -1.0
4,061,093 - -0.2
4,061,143 + +1.8

Or see this region's nucleotide sequence