Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2987

Experiment: L-Methionine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_2985 and Echvi_2986 are separated by 27 nucleotidesEchvi_2986 and Echvi_2987 are separated by 12 nucleotidesEchvi_2987 and Echvi_2988 are separated by 153 nucleotides Echvi_2985: Echvi_2985 - Polysaccharide lyase family 8, C-terminal beta-sandwich domain./Polysaccharide lyase family 8, super-sandwich domain./Polysaccharide lyase family 8, N terminal alpha-helical domain., at 3,566,753 to 3,568,756 _2985 Echvi_2986: Echvi_2986 - hypothetical protein, at 3,568,784 to 3,569,731 _2986 Echvi_2987: Echvi_2987 - Predicted membrane protein involved in D-alanine export, at 3,569,744 to 3,571,144 _2987 Echvi_2988: Echvi_2988 - tryptophanyl-tRNA synthetase, at 3,571,298 to 3,572,272 _2988 Position (kb) 3569 3570 3571 3572Strain fitness (log2 ratio) -1 0 1 2 3at 3568.779 kb on + strandat 3568.779 kb on + strandat 3568.780 kb on - strandat 3568.790 kb on + strandat 3568.808 kb on + strandat 3568.808 kb on + strandat 3568.808 kb on + strandat 3568.809 kb on - strandat 3568.834 kb on + strandat 3568.868 kb on + strandat 3568.869 kb on - strandat 3568.869 kb on - strandat 3568.943 kb on - strand, within Echvi_2986at 3568.971 kb on + strand, within Echvi_2986at 3568.972 kb on - strand, within Echvi_2986at 3568.977 kb on - strand, within Echvi_2986at 3568.977 kb on - strand, within Echvi_2986at 3568.988 kb on - strand, within Echvi_2986at 3569.006 kb on - strand, within Echvi_2986at 3569.006 kb on - strand, within Echvi_2986at 3569.006 kb on - strand, within Echvi_2986at 3569.008 kb on - strand, within Echvi_2986at 3569.008 kb on - strand, within Echvi_2986at 3569.008 kb on - strand, within Echvi_2986at 3569.008 kb on - strand, within Echvi_2986at 3569.085 kb on + strand, within Echvi_2986at 3569.086 kb on - strand, within Echvi_2986at 3569.144 kb on + strand, within Echvi_2986at 3569.180 kb on + strand, within Echvi_2986at 3569.209 kb on - strand, within Echvi_2986at 3569.209 kb on - strand, within Echvi_2986at 3569.227 kb on - strand, within Echvi_2986at 3569.227 kb on - strand, within Echvi_2986at 3569.227 kb on - strand, within Echvi_2986at 3569.227 kb on - strand, within Echvi_2986at 3569.227 kb on - strand, within Echvi_2986at 3569.227 kb on - strand, within Echvi_2986at 3569.229 kb on + strand, within Echvi_2986at 3569.229 kb on + strand, within Echvi_2986at 3569.229 kb on + strand, within Echvi_2986at 3569.229 kb on + strand, within Echvi_2986at 3569.230 kb on - strand, within Echvi_2986at 3569.230 kb on - strand, within Echvi_2986at 3569.242 kb on - strand, within Echvi_2986at 3569.259 kb on + strand, within Echvi_2986at 3569.294 kb on + strand, within Echvi_2986at 3569.300 kb on - strand, within Echvi_2986at 3569.326 kb on - strand, within Echvi_2986at 3569.326 kb on - strand, within Echvi_2986at 3569.380 kb on + strand, within Echvi_2986at 3569.381 kb on - strand, within Echvi_2986at 3569.381 kb on - strand, within Echvi_2986at 3569.383 kb on - strand, within Echvi_2986at 3569.383 kb on - strand, within Echvi_2986at 3569.393 kb on + strand, within Echvi_2986at 3569.395 kb on + strand, within Echvi_2986at 3569.395 kb on + strand, within Echvi_2986at 3569.402 kb on + strand, within Echvi_2986at 3569.403 kb on - strand, within Echvi_2986at 3569.441 kb on - strand, within Echvi_2986at 3569.460 kb on + strand, within Echvi_2986at 3569.460 kb on + strand, within Echvi_2986at 3569.460 kb on + strand, within Echvi_2986at 3569.460 kb on + strand, within Echvi_2986at 3569.460 kb on + strand, within Echvi_2986at 3569.461 kb on - strand, within Echvi_2986at 3569.461 kb on - strand, within Echvi_2986at 3569.507 kb on - strand, within Echvi_2986at 3569.507 kb on - strand, within Echvi_2986at 3569.576 kb on - strand, within Echvi_2986at 3569.674 kb on - strandat 3569.696 kb on + strandat 3569.697 kb on - strandat 3569.797 kb on + strandat 3569.808 kb on - strandat 3569.808 kb on - strandat 3569.831 kb on + strandat 3569.832 kb on - strandat 3569.884 kb on + strand, within Echvi_2987at 3569.884 kb on + strand, within Echvi_2987at 3569.885 kb on - strand, within Echvi_2987at 3569.885 kb on - strand, within Echvi_2987at 3569.885 kb on - strand, within Echvi_2987at 3569.885 kb on - strand, within Echvi_2987at 3569.886 kb on + strand, within Echvi_2987at 3569.886 kb on + strand, within Echvi_2987at 3569.886 kb on + strand, within Echvi_2987at 3569.886 kb on + strand, within Echvi_2987at 3569.886 kb on + strand, within Echvi_2987at 3569.887 kb on - strand, within Echvi_2987at 3569.887 kb on - strand, within Echvi_2987at 3569.887 kb on - strand, within Echvi_2987at 3569.887 kb on - strand, within Echvi_2987at 3569.887 kb on - strand, within Echvi_2987at 3569.887 kb on - strand, within Echvi_2987at 3569.887 kb on - strand, within Echvi_2987at 3569.887 kb on - strand, within Echvi_2987at 3569.887 kb on - strand, within Echvi_2987at 3569.887 kb on - strand, within Echvi_2987at 3569.894 kb on + strand, within Echvi_2987at 3569.894 kb on + strand, within Echvi_2987at 3569.894 kb on + strand, within Echvi_2987at 3569.894 kb on + strand, within Echvi_2987at 3569.894 kb on + strand, within Echvi_2987at 3569.894 kb on + strand, within Echvi_2987at 3569.897 kb on + strand, within Echvi_2987at 3569.898 kb on - strand, within Echvi_2987at 3569.898 kb on - strand, within Echvi_2987at 3569.901 kb on - strand, within Echvi_2987at 3569.903 kb on + strand, within Echvi_2987at 3569.952 kb on + strand, within Echvi_2987at 3569.963 kb on - strand, within Echvi_2987at 3570.150 kb on + strand, within Echvi_2987at 3570.150 kb on + strand, within Echvi_2987at 3570.150 kb on + strand, within Echvi_2987at 3570.150 kb on + strand, within Echvi_2987at 3570.150 kb on + strand, within Echvi_2987at 3570.150 kb on + strand, within Echvi_2987at 3570.151 kb on - strand, within Echvi_2987at 3570.187 kb on + strand, within Echvi_2987at 3570.187 kb on + strand, within Echvi_2987at 3570.200 kb on + strand, within Echvi_2987at 3570.201 kb on - strand, within Echvi_2987at 3570.201 kb on - strand, within Echvi_2987at 3570.206 kb on + strand, within Echvi_2987at 3570.233 kb on - strand, within Echvi_2987at 3570.233 kb on - strand, within Echvi_2987at 3570.242 kb on + strand, within Echvi_2987at 3570.250 kb on + strand, within Echvi_2987at 3570.251 kb on - strand, within Echvi_2987at 3570.252 kb on + strand, within Echvi_2987at 3570.252 kb on + strand, within Echvi_2987at 3570.252 kb on + strand, within Echvi_2987at 3570.253 kb on - strand, within Echvi_2987at 3570.253 kb on - strand, within Echvi_2987at 3570.258 kb on + strand, within Echvi_2987at 3570.259 kb on - strand, within Echvi_2987at 3570.275 kb on - strand, within Echvi_2987at 3570.310 kb on + strand, within Echvi_2987at 3570.311 kb on - strand, within Echvi_2987at 3570.320 kb on - strand, within Echvi_2987at 3570.396 kb on + strand, within Echvi_2987at 3570.414 kb on + strand, within Echvi_2987at 3570.477 kb on - strand, within Echvi_2987at 3570.477 kb on - strand, within Echvi_2987at 3570.483 kb on + strand, within Echvi_2987at 3570.483 kb on + strand, within Echvi_2987at 3570.483 kb on + strand, within Echvi_2987at 3570.483 kb on + strand, within Echvi_2987at 3570.483 kb on + strand, within Echvi_2987at 3570.484 kb on - strand, within Echvi_2987at 3570.484 kb on - strand, within Echvi_2987at 3570.484 kb on - strand, within Echvi_2987at 3570.484 kb on - strand, within Echvi_2987at 3570.484 kb on - strand, within Echvi_2987at 3570.485 kb on + strand, within Echvi_2987at 3570.486 kb on - strand, within Echvi_2987at 3570.486 kb on - strand, within Echvi_2987at 3570.486 kb on - strand, within Echvi_2987at 3570.486 kb on - strand, within Echvi_2987at 3570.486 kb on - strand, within Echvi_2987at 3570.486 kb on - strand, within Echvi_2987at 3570.486 kb on - strand, within Echvi_2987at 3570.486 kb on - strand, within Echvi_2987at 3570.494 kb on + strand, within Echvi_2987at 3570.499 kb on - strand, within Echvi_2987at 3570.512 kb on - strand, within Echvi_2987at 3570.512 kb on - strand, within Echvi_2987at 3570.512 kb on - strand, within Echvi_2987at 3570.551 kb on + strand, within Echvi_2987at 3570.635 kb on - strand, within Echvi_2987at 3570.635 kb on - strand, within Echvi_2987at 3570.666 kb on - strand, within Echvi_2987at 3570.683 kb on + strand, within Echvi_2987at 3570.718 kb on - strand, within Echvi_2987at 3570.721 kb on + strand, within Echvi_2987at 3570.722 kb on - strand, within Echvi_2987at 3570.725 kb on + strand, within Echvi_2987at 3570.725 kb on + strand, within Echvi_2987at 3570.725 kb on + strand, within Echvi_2987at 3570.726 kb on - strand, within Echvi_2987at 3570.726 kb on - strand, within Echvi_2987at 3570.726 kb on - strand, within Echvi_2987at 3570.726 kb on - strand, within Echvi_2987at 3570.727 kb on + strand, within Echvi_2987at 3570.732 kb on + strand, within Echvi_2987at 3570.732 kb on + strand, within Echvi_2987at 3570.733 kb on - strand, within Echvi_2987at 3570.733 kb on - strand, within Echvi_2987at 3570.733 kb on - strand, within Echvi_2987at 3570.733 kb on - strand, within Echvi_2987at 3570.733 kb on - strand, within Echvi_2987at 3570.733 kb on - strand, within Echvi_2987at 3570.736 kb on + strand, within Echvi_2987at 3570.737 kb on - strand, within Echvi_2987at 3570.753 kb on + strand, within Echvi_2987at 3570.754 kb on - strand, within Echvi_2987at 3570.834 kb on - strand, within Echvi_2987at 3570.868 kb on - strand, within Echvi_2987at 3570.899 kb on + strand, within Echvi_2987at 3570.899 kb on + strand, within Echvi_2987at 3570.940 kb on + strand, within Echvi_2987at 3570.941 kb on - strand, within Echvi_2987at 3570.964 kb on - strand, within Echvi_2987at 3570.980 kb on - strand, within Echvi_2987at 3571.021 kb on - strandat 3571.064 kb on + strandat 3571.076 kb on - strandat 3571.103 kb on + strandat 3571.145 kb on - strandat 3571.145 kb on - strandat 3571.257 kb on + strandat 3571.282 kb on + strandat 3571.282 kb on + strandat 3571.282 kb on + strandat 3571.282 kb on + strandat 3571.282 kb on + strandat 3571.282 kb on + strandat 3571.282 kb on + strandat 3571.282 kb on + strandat 3571.299 kb on + strandat 3571.303 kb on + strandat 3571.303 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Methionine (N)
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3,568,779 + -0.2
3,568,779 + -0.1
3,568,780 - +0.5
3,568,790 + +2.0
3,568,808 + -0.5
3,568,808 + +1.1
3,568,808 + -0.5
3,568,809 - +0.2
3,568,834 + -0.5
3,568,868 + +1.6
3,568,869 - +0.5
3,568,869 - +0.4
3,568,943 - Echvi_2986 0.17 -0.1
3,568,971 + Echvi_2986 0.20 +1.0
3,568,972 - Echvi_2986 0.20 -0.4
3,568,977 - Echvi_2986 0.20 -0.3
3,568,977 - Echvi_2986 0.20 -0.9
3,568,988 - Echvi_2986 0.22 +0.7
3,569,006 - Echvi_2986 0.23 +0.5
3,569,006 - Echvi_2986 0.23 -0.1
3,569,006 - Echvi_2986 0.23 -0.5
3,569,008 - Echvi_2986 0.24 -0.9
3,569,008 - Echvi_2986 0.24 -0.7
3,569,008 - Echvi_2986 0.24 +0.6
3,569,008 - Echvi_2986 0.24 -0.9
3,569,085 + Echvi_2986 0.32 +0.1
3,569,086 - Echvi_2986 0.32 -0.1
3,569,144 + Echvi_2986 0.38 -1.7
3,569,180 + Echvi_2986 0.42 +1.6
3,569,209 - Echvi_2986 0.45 -0.5
3,569,209 - Echvi_2986 0.45 +0.6
3,569,227 - Echvi_2986 0.47 -0.1
3,569,227 - Echvi_2986 0.47 +0.5
3,569,227 - Echvi_2986 0.47 -0.9
3,569,227 - Echvi_2986 0.47 -0.8
3,569,227 - Echvi_2986 0.47 +0.2
3,569,227 - Echvi_2986 0.47 -0.7
3,569,229 + Echvi_2986 0.47 +0.7
3,569,229 + Echvi_2986 0.47 +0.6
3,569,229 + Echvi_2986 0.47 +1.0
3,569,229 + Echvi_2986 0.47 +0.3
3,569,230 - Echvi_2986 0.47 -0.9
3,569,230 - Echvi_2986 0.47 +0.0
3,569,242 - Echvi_2986 0.48 +0.7
3,569,259 + Echvi_2986 0.50 +0.2
3,569,294 + Echvi_2986 0.54 +0.2
3,569,300 - Echvi_2986 0.54 +0.3
3,569,326 - Echvi_2986 0.57 -0.4
3,569,326 - Echvi_2986 0.57 -0.3
3,569,380 + Echvi_2986 0.63 -1.0
3,569,381 - Echvi_2986 0.63 +1.3
3,569,381 - Echvi_2986 0.63 -1.5
3,569,383 - Echvi_2986 0.63 +0.3
3,569,383 - Echvi_2986 0.63 -0.9
3,569,393 + Echvi_2986 0.64 +0.2
3,569,395 + Echvi_2986 0.64 +0.5
3,569,395 + Echvi_2986 0.64 -0.4
3,569,402 + Echvi_2986 0.65 +1.2
3,569,403 - Echvi_2986 0.65 +1.0
3,569,441 - Echvi_2986 0.69 +0.7
3,569,460 + Echvi_2986 0.71 +1.7
3,569,460 + Echvi_2986 0.71 -0.2
3,569,460 + Echvi_2986 0.71 -1.3
3,569,460 + Echvi_2986 0.71 -0.8
3,569,460 + Echvi_2986 0.71 +0.9
3,569,461 - Echvi_2986 0.71 +0.2
3,569,461 - Echvi_2986 0.71 -0.1
3,569,507 - Echvi_2986 0.76 -0.4
3,569,507 - Echvi_2986 0.76 -0.7
3,569,576 - Echvi_2986 0.84 -1.3
3,569,674 - -0.0
3,569,696 + +0.6
3,569,697 - +2.3
3,569,797 + +0.0
3,569,808 - +0.1
3,569,808 - +1.1
3,569,831 + -0.2
3,569,832 - -0.2
3,569,884 + Echvi_2987 0.10 -0.4
3,569,884 + Echvi_2987 0.10 -0.6
3,569,885 - Echvi_2987 0.10 -0.3
3,569,885 - Echvi_2987 0.10 +0.1
3,569,885 - Echvi_2987 0.10 -0.6
3,569,885 - Echvi_2987 0.10 +0.8
3,569,886 + Echvi_2987 0.10 -0.3
3,569,886 + Echvi_2987 0.10 +0.9
3,569,886 + Echvi_2987 0.10 -0.3
3,569,886 + Echvi_2987 0.10 -0.7
3,569,886 + Echvi_2987 0.10 +1.1
3,569,887 - Echvi_2987 0.10 +2.7
3,569,887 - Echvi_2987 0.10 -1.5
3,569,887 - Echvi_2987 0.10 +0.7
3,569,887 - Echvi_2987 0.10 -1.3
3,569,887 - Echvi_2987 0.10 +0.9
3,569,887 - Echvi_2987 0.10 -0.7
3,569,887 - Echvi_2987 0.10 -0.8
3,569,887 - Echvi_2987 0.10 -0.6
3,569,887 - Echvi_2987 0.10 +0.7
3,569,887 - Echvi_2987 0.10 -0.6
3,569,894 + Echvi_2987 0.11 -0.2
3,569,894 + Echvi_2987 0.11 +1.5
3,569,894 + Echvi_2987 0.11 -1.3
3,569,894 + Echvi_2987 0.11 -0.4
3,569,894 + Echvi_2987 0.11 +0.6
3,569,894 + Echvi_2987 0.11 +0.2
3,569,897 + Echvi_2987 0.11 +0.5
3,569,898 - Echvi_2987 0.11 -0.3
3,569,898 - Echvi_2987 0.11 +0.1
3,569,901 - Echvi_2987 0.11 +0.4
3,569,903 + Echvi_2987 0.11 -0.6
3,569,952 + Echvi_2987 0.15 +2.3
3,569,963 - Echvi_2987 0.16 -0.7
3,570,150 + Echvi_2987 0.29 +0.4
3,570,150 + Echvi_2987 0.29 -0.9
3,570,150 + Echvi_2987 0.29 -0.5
3,570,150 + Echvi_2987 0.29 -0.2
3,570,150 + Echvi_2987 0.29 -0.4
3,570,150 + Echvi_2987 0.29 +0.9
3,570,151 - Echvi_2987 0.29 -1.2
3,570,187 + Echvi_2987 0.32 +1.3
3,570,187 + Echvi_2987 0.32 +0.3
3,570,200 + Echvi_2987 0.33 +1.8
3,570,201 - Echvi_2987 0.33 -1.4
3,570,201 - Echvi_2987 0.33 -0.3
3,570,206 + Echvi_2987 0.33 -0.4
3,570,233 - Echvi_2987 0.35 +0.5
3,570,233 - Echvi_2987 0.35 -0.6
3,570,242 + Echvi_2987 0.36 +3.3
3,570,250 + Echvi_2987 0.36 +1.7
3,570,251 - Echvi_2987 0.36 -0.5
3,570,252 + Echvi_2987 0.36 -1.0
3,570,252 + Echvi_2987 0.36 +0.6
3,570,252 + Echvi_2987 0.36 -1.1
3,570,253 - Echvi_2987 0.36 +0.1
3,570,253 - Echvi_2987 0.36 +0.2
3,570,258 + Echvi_2987 0.37 -0.5
3,570,259 - Echvi_2987 0.37 -0.0
3,570,275 - Echvi_2987 0.38 +0.4
3,570,310 + Echvi_2987 0.40 -0.3
3,570,311 - Echvi_2987 0.40 -0.3
3,570,320 - Echvi_2987 0.41 -0.2
3,570,396 + Echvi_2987 0.47 -0.2
3,570,414 + Echvi_2987 0.48 -0.3
3,570,477 - Echvi_2987 0.52 +0.9
3,570,477 - Echvi_2987 0.52 -0.5
3,570,483 + Echvi_2987 0.53 +0.7
3,570,483 + Echvi_2987 0.53 -0.1
3,570,483 + Echvi_2987 0.53 +0.3
3,570,483 + Echvi_2987 0.53 -0.4
3,570,483 + Echvi_2987 0.53 -1.1
3,570,484 - Echvi_2987 0.53 -0.4
3,570,484 - Echvi_2987 0.53 -0.1
3,570,484 - Echvi_2987 0.53 -0.5
3,570,484 - Echvi_2987 0.53 -0.6
3,570,484 - Echvi_2987 0.53 +0.6
3,570,485 + Echvi_2987 0.53 +0.8
3,570,486 - Echvi_2987 0.53 -0.4
3,570,486 - Echvi_2987 0.53 +1.0
3,570,486 - Echvi_2987 0.53 +0.1
3,570,486 - Echvi_2987 0.53 +0.5
3,570,486 - Echvi_2987 0.53 +1.1
3,570,486 - Echvi_2987 0.53 +2.1
3,570,486 - Echvi_2987 0.53 -0.8
3,570,486 - Echvi_2987 0.53 +1.3
3,570,494 + Echvi_2987 0.54 -0.1
3,570,499 - Echvi_2987 0.54 +0.1
3,570,512 - Echvi_2987 0.55 -0.0
3,570,512 - Echvi_2987 0.55 -1.1
3,570,512 - Echvi_2987 0.55 +0.1
3,570,551 + Echvi_2987 0.58 -0.2
3,570,635 - Echvi_2987 0.64 +0.1
3,570,635 - Echvi_2987 0.64 -1.1
3,570,666 - Echvi_2987 0.66 -0.3
3,570,683 + Echvi_2987 0.67 -0.7
3,570,718 - Echvi_2987 0.70 +0.5
3,570,721 + Echvi_2987 0.70 -1.0
3,570,722 - Echvi_2987 0.70 -0.2
3,570,725 + Echvi_2987 0.70 +0.6
3,570,725 + Echvi_2987 0.70 +0.4
3,570,725 + Echvi_2987 0.70 +0.6
3,570,726 - Echvi_2987 0.70 +1.7
3,570,726 - Echvi_2987 0.70 -0.1
3,570,726 - Echvi_2987 0.70 +0.7
3,570,726 - Echvi_2987 0.70 +0.1
3,570,727 + Echvi_2987 0.70 +0.7
3,570,732 + Echvi_2987 0.71 +0.3
3,570,732 + Echvi_2987 0.71 -0.7
3,570,733 - Echvi_2987 0.71 -1.5
3,570,733 - Echvi_2987 0.71 +0.7
3,570,733 - Echvi_2987 0.71 -0.0
3,570,733 - Echvi_2987 0.71 +1.4
3,570,733 - Echvi_2987 0.71 -0.5
3,570,733 - Echvi_2987 0.71 +0.4
3,570,736 + Echvi_2987 0.71 -0.6
3,570,737 - Echvi_2987 0.71 -0.1
3,570,753 + Echvi_2987 0.72 -1.2
3,570,754 - Echvi_2987 0.72 -1.6
3,570,834 - Echvi_2987 0.78 +0.7
3,570,868 - Echvi_2987 0.80 -0.2
3,570,899 + Echvi_2987 0.82 +0.7
3,570,899 + Echvi_2987 0.82 -0.7
3,570,940 + Echvi_2987 0.85 +0.7
3,570,941 - Echvi_2987 0.85 -0.4
3,570,964 - Echvi_2987 0.87 +0.5
3,570,980 - Echvi_2987 0.88 +0.3
3,571,021 - -0.4
3,571,064 + +0.7
3,571,076 - -0.8
3,571,103 + +0.2
3,571,145 - -0.0
3,571,145 - -0.1
3,571,257 + +1.0
3,571,282 + +0.1
3,571,282 + -0.3
3,571,282 + -0.2
3,571,282 + -1.4
3,571,282 + -0.2
3,571,282 + -0.1
3,571,282 + -0.3
3,571,282 + +0.7
3,571,299 + +0.4
3,571,303 + +0.9
3,571,303 + -1.2

Or see this region's nucleotide sequence