Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2154 and Echvi_2155 are separated by 476 nucleotides Echvi_2155 and Echvi_2156 are separated by 99 nucleotides
Echvi_2154: Echvi_2154 - Response regulator of the LytR/AlgR family, at 2,562,451 to 2,563,191
_2154
Echvi_2155: Echvi_2155 - PAS domain S-box, at 2,563,668 to 2,565,374
_2155
Echvi_2156: Echvi_2156 - Domain of Unknown Function (DUF1080)., at 2,565,474 to 2,566,355
_2156
Position (kb)
2563
2564
2565
2566 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2562.687 kb on - strand, within Echvi_2154 at 2562.741 kb on - strand, within Echvi_2154 at 2562.741 kb on - strand, within Echvi_2154 at 2562.741 kb on - strand, within Echvi_2154 at 2562.756 kb on + strand, within Echvi_2154 at 2562.762 kb on + strand, within Echvi_2154 at 2562.762 kb on + strand, within Echvi_2154 at 2562.762 kb on + strand, within Echvi_2154 at 2562.762 kb on + strand, within Echvi_2154 at 2562.762 kb on + strand, within Echvi_2154 at 2562.763 kb on - strand, within Echvi_2154 at 2562.780 kb on + strand, within Echvi_2154 at 2562.832 kb on - strand, within Echvi_2154 at 2562.835 kb on - strand, within Echvi_2154 at 2562.847 kb on - strand, within Echvi_2154 at 2562.847 kb on - strand, within Echvi_2154 at 2562.888 kb on + strand, within Echvi_2154 at 2562.888 kb on + strand, within Echvi_2154 at 2562.889 kb on - strand, within Echvi_2154 at 2562.889 kb on - strand, within Echvi_2154 at 2562.890 kb on + strand, within Echvi_2154 at 2562.890 kb on + strand, within Echvi_2154 at 2562.891 kb on - strand, within Echvi_2154 at 2562.891 kb on - strand, within Echvi_2154 at 2562.891 kb on - strand, within Echvi_2154 at 2562.923 kb on - strand, within Echvi_2154 at 2562.994 kb on + strand, within Echvi_2154 at 2563.063 kb on + strand, within Echvi_2154 at 2563.063 kb on + strand, within Echvi_2154 at 2563.063 kb on + strand, within Echvi_2154 at 2563.068 kb on + strand, within Echvi_2154 at 2563.140 kb on + strand at 2563.140 kb on + strand at 2563.141 kb on - strand at 2563.174 kb on + strand at 2563.177 kb on + strand at 2563.178 kb on - strand at 2563.191 kb on + strand at 2563.196 kb on - strand at 2563.297 kb on + strand at 2563.298 kb on - strand at 2563.363 kb on + strand at 2563.363 kb on + strand at 2563.369 kb on - strand at 2563.372 kb on - strand at 2563.384 kb on + strand at 2563.429 kb on + strand at 2563.482 kb on - strand at 2563.498 kb on + strand at 2563.499 kb on - strand at 2563.503 kb on - strand at 2563.503 kb on - strand at 2563.531 kb on - strand at 2563.542 kb on + strand at 2563.543 kb on - strand at 2563.661 kb on + strand at 2563.697 kb on + strand at 2563.698 kb on - strand at 2563.698 kb on - strand at 2563.698 kb on - strand at 2563.700 kb on + strand at 2563.737 kb on - strand at 2563.763 kb on + strand at 2563.763 kb on + strand at 2563.841 kb on + strand, within Echvi_2155 at 2563.842 kb on - strand, within Echvi_2155 at 2563.932 kb on - strand, within Echvi_2155 at 2563.936 kb on + strand, within Echvi_2155 at 2563.936 kb on + strand, within Echvi_2155 at 2563.936 kb on + strand, within Echvi_2155 at 2563.937 kb on - strand, within Echvi_2155 at 2563.940 kb on + strand, within Echvi_2155 at 2563.940 kb on + strand, within Echvi_2155 at 2563.940 kb on + strand, within Echvi_2155 at 2563.940 kb on + strand, within Echvi_2155 at 2563.941 kb on - strand, within Echvi_2155 at 2563.941 kb on - strand, within Echvi_2155 at 2563.951 kb on - strand, within Echvi_2155 at 2563.973 kb on + strand, within Echvi_2155 at 2563.974 kb on - strand, within Echvi_2155 at 2564.027 kb on - strand, within Echvi_2155 at 2564.027 kb on - strand, within Echvi_2155 at 2564.052 kb on - strand, within Echvi_2155 at 2564.105 kb on - strand, within Echvi_2155 at 2564.105 kb on - strand, within Echvi_2155 at 2564.121 kb on + strand, within Echvi_2155 at 2564.233 kb on + strand, within Echvi_2155 at 2564.251 kb on - strand, within Echvi_2155 at 2564.285 kb on + strand, within Echvi_2155 at 2564.314 kb on + strand, within Echvi_2155 at 2564.314 kb on + strand, within Echvi_2155 at 2564.315 kb on - strand, within Echvi_2155 at 2564.350 kb on + strand, within Echvi_2155 at 2564.351 kb on - strand, within Echvi_2155 at 2564.351 kb on - strand, within Echvi_2155 at 2564.418 kb on - strand, within Echvi_2155 at 2564.465 kb on + strand, within Echvi_2155 at 2564.465 kb on + strand, within Echvi_2155 at 2564.466 kb on - strand, within Echvi_2155 at 2564.466 kb on - strand, within Echvi_2155 at 2564.494 kb on + strand, within Echvi_2155 at 2564.494 kb on + strand, within Echvi_2155 at 2564.495 kb on - strand, within Echvi_2155 at 2564.495 kb on - strand, within Echvi_2155 at 2564.495 kb on - strand, within Echvi_2155 at 2564.528 kb on + strand, within Echvi_2155 at 2564.528 kb on + strand, within Echvi_2155 at 2564.528 kb on + strand, within Echvi_2155 at 2564.529 kb on - strand, within Echvi_2155 at 2564.529 kb on - strand, within Echvi_2155 at 2564.562 kb on - strand, within Echvi_2155 at 2564.562 kb on - strand, within Echvi_2155 at 2564.577 kb on + strand, within Echvi_2155 at 2564.577 kb on + strand, within Echvi_2155 at 2564.577 kb on + strand, within Echvi_2155 at 2564.578 kb on - strand, within Echvi_2155 at 2564.607 kb on - strand, within Echvi_2155 at 2564.607 kb on - strand, within Echvi_2155 at 2564.687 kb on - strand, within Echvi_2155 at 2564.690 kb on + strand, within Echvi_2155 at 2564.691 kb on - strand, within Echvi_2155 at 2564.717 kb on + strand, within Echvi_2155 at 2564.774 kb on + strand, within Echvi_2155 at 2564.881 kb on + strand, within Echvi_2155 at 2565.048 kb on - strand, within Echvi_2155 at 2565.119 kb on - strand, within Echvi_2155 at 2565.213 kb on - strand at 2565.372 kb on + strand at 2565.391 kb on - strand at 2565.435 kb on - strand at 2565.488 kb on - strand at 2565.515 kb on + strand at 2565.559 kb on + strand at 2565.650 kb on - strand, within Echvi_2156 at 2565.672 kb on - strand, within Echvi_2156 at 2565.672 kb on - strand, within Echvi_2156 at 2565.715 kb on + strand, within Echvi_2156 at 2565.716 kb on - strand, within Echvi_2156 at 2565.716 kb on - strand, within Echvi_2156 at 2565.720 kb on + strand, within Echvi_2156 at 2565.721 kb on - strand, within Echvi_2156 at 2565.730 kb on - strand, within Echvi_2156 at 2565.750 kb on + strand, within Echvi_2156 at 2565.787 kb on - strand, within Echvi_2156 at 2565.791 kb on - strand, within Echvi_2156 at 2565.937 kb on + strand, within Echvi_2156 at 2565.938 kb on - strand, within Echvi_2156 at 2565.966 kb on - strand, within Echvi_2156 at 2565.983 kb on + strand, within Echvi_2156 at 2565.993 kb on - strand, within Echvi_2156 at 2565.995 kb on + strand, within Echvi_2156 at 2566.022 kb on + strand, within Echvi_2156 at 2566.056 kb on + strand, within Echvi_2156 at 2566.056 kb on + strand, within Echvi_2156 at 2566.056 kb on + strand, within Echvi_2156 at 2566.057 kb on - strand, within Echvi_2156 at 2566.118 kb on + strand, within Echvi_2156 at 2566.119 kb on - strand, within Echvi_2156 at 2566.146 kb on + strand, within Echvi_2156 at 2566.146 kb on + strand, within Echvi_2156 at 2566.146 kb on + strand, within Echvi_2156 at 2566.146 kb on + strand, within Echvi_2156 at 2566.147 kb on - strand, within Echvi_2156 at 2566.147 kb on - strand, within Echvi_2156 at 2566.147 kb on - strand, within Echvi_2156 at 2566.147 kb on - strand, within Echvi_2156 at 2566.147 kb on - strand, within Echvi_2156 at 2566.149 kb on + strand, within Echvi_2156 at 2566.149 kb on + strand, within Echvi_2156 at 2566.149 kb on + strand, within Echvi_2156 at 2566.150 kb on - strand, within Echvi_2156 at 2566.150 kb on - strand, within Echvi_2156 at 2566.150 kb on - strand, within Echvi_2156 at 2566.177 kb on + strand, within Echvi_2156 at 2566.178 kb on - strand, within Echvi_2156 at 2566.178 kb on - strand, within Echvi_2156 at 2566.211 kb on + strand, within Echvi_2156 at 2566.217 kb on - strand, within Echvi_2156 at 2566.232 kb on + strand, within Echvi_2156 at 2566.233 kb on - strand, within Echvi_2156 at 2566.299 kb on + strand at 2566.299 kb on + strand at 2566.300 kb on - strand at 2566.301 kb on + strand at 2566.301 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 2,562,687 - Echvi_2154 0.32 -0.2 2,562,741 - Echvi_2154 0.39 +0.2 2,562,741 - Echvi_2154 0.39 +0.2 2,562,741 - Echvi_2154 0.39 +0.7 2,562,756 + Echvi_2154 0.41 -1.0 2,562,762 + Echvi_2154 0.42 -0.4 2,562,762 + Echvi_2154 0.42 +0.8 2,562,762 + Echvi_2154 0.42 -0.0 2,562,762 + Echvi_2154 0.42 +0.3 2,562,762 + Echvi_2154 0.42 -0.4 2,562,763 - Echvi_2154 0.42 -0.4 2,562,780 + Echvi_2154 0.44 -1.1 2,562,832 - Echvi_2154 0.51 -1.9 2,562,835 - Echvi_2154 0.52 -0.6 2,562,847 - Echvi_2154 0.53 -2.1 2,562,847 - Echvi_2154 0.53 +0.6 2,562,888 + Echvi_2154 0.59 -1.0 2,562,888 + Echvi_2154 0.59 +2.4 2,562,889 - Echvi_2154 0.59 +0.4 2,562,889 - Echvi_2154 0.59 +0.6 2,562,890 + Echvi_2154 0.59 -0.3 2,562,890 + Echvi_2154 0.59 -0.1 2,562,891 - Echvi_2154 0.59 -0.5 2,562,891 - Echvi_2154 0.59 -0.1 2,562,891 - Echvi_2154 0.59 +0.3 2,562,923 - Echvi_2154 0.64 +0.2 2,562,994 + Echvi_2154 0.73 +0.4 2,563,063 + Echvi_2154 0.83 -2.2 2,563,063 + Echvi_2154 0.83 -0.4 2,563,063 + Echvi_2154 0.83 -0.3 2,563,068 + Echvi_2154 0.83 +0.3 2,563,140 + +1.8 2,563,140 + -0.4 2,563,141 - +0.2 2,563,174 + -0.3 2,563,177 + +0.3 2,563,178 - -0.5 2,563,191 + +0.4 2,563,196 - +0.1 2,563,297 + -0.2 2,563,298 - +0.7 2,563,363 + +1.4 2,563,363 + -0.2 2,563,369 - -0.3 2,563,372 - -0.4 2,563,384 + +0.2 2,563,429 + +0.5 2,563,482 - -0.2 2,563,498 + +0.5 2,563,499 - -1.1 2,563,503 - +2.1 2,563,503 - +0.0 2,563,531 - -0.3 2,563,542 + -0.1 2,563,543 - +0.4 2,563,661 + -3.0 2,563,697 + -0.4 2,563,698 - -0.3 2,563,698 - +0.7 2,563,698 - +0.4 2,563,700 + -1.0 2,563,737 - -0.8 2,563,763 + +0.4 2,563,763 + +1.0 2,563,841 + Echvi_2155 0.10 +0.5 2,563,842 - Echvi_2155 0.10 -1.5 2,563,932 - Echvi_2155 0.15 -1.7 2,563,936 + Echvi_2155 0.16 +1.0 2,563,936 + Echvi_2155 0.16 +2.5 2,563,936 + Echvi_2155 0.16 +0.4 2,563,937 - Echvi_2155 0.16 -1.4 2,563,940 + Echvi_2155 0.16 +0.6 2,563,940 + Echvi_2155 0.16 +1.6 2,563,940 + Echvi_2155 0.16 -0.0 2,563,940 + Echvi_2155 0.16 +2.4 2,563,941 - Echvi_2155 0.16 -0.6 2,563,941 - Echvi_2155 0.16 -0.9 2,563,951 - Echvi_2155 0.17 +0.8 2,563,973 + Echvi_2155 0.18 +0.6 2,563,974 - Echvi_2155 0.18 +2.4 2,564,027 - Echvi_2155 0.21 +0.0 2,564,027 - Echvi_2155 0.21 +0.3 2,564,052 - Echvi_2155 0.22 +1.6 2,564,105 - Echvi_2155 0.26 -0.2 2,564,105 - Echvi_2155 0.26 +0.5 2,564,121 + Echvi_2155 0.27 +1.2 2,564,233 + Echvi_2155 0.33 -1.0 2,564,251 - Echvi_2155 0.34 +1.5 2,564,285 + Echvi_2155 0.36 +0.9 2,564,314 + Echvi_2155 0.38 -0.1 2,564,314 + Echvi_2155 0.38 -1.0 2,564,315 - Echvi_2155 0.38 -1.2 2,564,350 + Echvi_2155 0.40 -1.1 2,564,351 - Echvi_2155 0.40 +0.0 2,564,351 - Echvi_2155 0.40 -1.2 2,564,418 - Echvi_2155 0.44 -1.0 2,564,465 + Echvi_2155 0.47 +1.4 2,564,465 + Echvi_2155 0.47 -0.3 2,564,466 - Echvi_2155 0.47 +0.2 2,564,466 - Echvi_2155 0.47 +0.1 2,564,494 + Echvi_2155 0.48 -0.4 2,564,494 + Echvi_2155 0.48 +0.3 2,564,495 - Echvi_2155 0.48 +1.1 2,564,495 - Echvi_2155 0.48 +0.2 2,564,495 - Echvi_2155 0.48 -1.6 2,564,528 + Echvi_2155 0.50 -1.8 2,564,528 + Echvi_2155 0.50 +0.6 2,564,528 + Echvi_2155 0.50 +0.7 2,564,529 - Echvi_2155 0.50 +0.9 2,564,529 - Echvi_2155 0.50 +0.1 2,564,562 - Echvi_2155 0.52 +0.3 2,564,562 - Echvi_2155 0.52 -0.1 2,564,577 + Echvi_2155 0.53 -1.4 2,564,577 + Echvi_2155 0.53 +0.6 2,564,577 + Echvi_2155 0.53 +0.3 2,564,578 - Echvi_2155 0.53 -0.0 2,564,607 - Echvi_2155 0.55 +0.9 2,564,607 - Echvi_2155 0.55 -0.8 2,564,687 - Echvi_2155 0.60 -3.1 2,564,690 + Echvi_2155 0.60 -0.6 2,564,691 - Echvi_2155 0.60 -0.4 2,564,717 + Echvi_2155 0.61 +0.6 2,564,774 + Echvi_2155 0.65 +0.2 2,564,881 + Echvi_2155 0.71 +0.8 2,565,048 - Echvi_2155 0.81 -0.1 2,565,119 - Echvi_2155 0.85 -0.0 2,565,213 - -0.4 2,565,372 + -1.0 2,565,391 - -1.2 2,565,435 - +1.0 2,565,488 - +0.3 2,565,515 + +0.6 2,565,559 + +0.3 2,565,650 - Echvi_2156 0.20 +0.6 2,565,672 - Echvi_2156 0.22 +0.4 2,565,672 - Echvi_2156 0.22 -1.2 2,565,715 + Echvi_2156 0.27 +0.5 2,565,716 - Echvi_2156 0.27 -1.5 2,565,716 - Echvi_2156 0.27 -0.4 2,565,720 + Echvi_2156 0.28 +0.3 2,565,721 - Echvi_2156 0.28 +0.0 2,565,730 - Echvi_2156 0.29 -0.2 2,565,750 + Echvi_2156 0.31 -0.4 2,565,787 - Echvi_2156 0.35 +0.4 2,565,791 - Echvi_2156 0.36 +0.4 2,565,937 + Echvi_2156 0.52 +1.0 2,565,938 - Echvi_2156 0.53 +1.0 2,565,966 - Echvi_2156 0.56 -1.5 2,565,983 + Echvi_2156 0.58 -1.2 2,565,993 - Echvi_2156 0.59 -1.9 2,565,995 + Echvi_2156 0.59 +0.1 2,566,022 + Echvi_2156 0.62 +1.7 2,566,056 + Echvi_2156 0.66 -1.1 2,566,056 + Echvi_2156 0.66 -1.4 2,566,056 + Echvi_2156 0.66 -0.9 2,566,057 - Echvi_2156 0.66 -1.0 2,566,118 + Echvi_2156 0.73 +0.8 2,566,119 - Echvi_2156 0.73 -1.6 2,566,146 + Echvi_2156 0.76 +0.3 2,566,146 + Echvi_2156 0.76 -1.3 2,566,146 + Echvi_2156 0.76 +0.2 2,566,146 + Echvi_2156 0.76 -0.5 2,566,147 - Echvi_2156 0.76 +0.1 2,566,147 - Echvi_2156 0.76 -0.8 2,566,147 - Echvi_2156 0.76 -0.1 2,566,147 - Echvi_2156 0.76 -0.7 2,566,147 - Echvi_2156 0.76 -0.2 2,566,149 + Echvi_2156 0.77 +1.1 2,566,149 + Echvi_2156 0.77 -0.2 2,566,149 + Echvi_2156 0.77 +0.1 2,566,150 - Echvi_2156 0.77 -0.1 2,566,150 - Echvi_2156 0.77 +0.3 2,566,150 - Echvi_2156 0.77 -0.2 2,566,177 + Echvi_2156 0.80 +0.8 2,566,178 - Echvi_2156 0.80 -0.4 2,566,178 - Echvi_2156 0.80 +0.4 2,566,211 + Echvi_2156 0.84 +1.3 2,566,217 - Echvi_2156 0.84 +0.2 2,566,232 + Echvi_2156 0.86 -1.3 2,566,233 - Echvi_2156 0.86 +0.1 2,566,299 + -1.1 2,566,299 + +1.1 2,566,300 - +0.4 2,566,301 + +0.3 2,566,301 + +0.2
Or see this region's nucleotide sequence