Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1489 and Echvi_1490 are separated by 104 nucleotides Echvi_1490 and Echvi_1491 are separated by 40 nucleotides Echvi_1491 and Echvi_1492 are separated by 77 nucleotides
Echvi_1489: Echvi_1489 - UDP-N-acetylglucosamine 2-epimerase, at 1,707,510 to 1,708,616
_1489
Echvi_1490: Echvi_1490 - alanine racemase, at 1,708,721 to 1,711,183
_1490
Echvi_1491: Echvi_1491 - export-related chaperone CsaA, at 1,711,224 to 1,711,559
_1491
Echvi_1492: Echvi_1492 - hypothetical protein, at 1,711,637 to 1,711,990
_1492
Position (kb)
1708
1709
1710
1711
1712 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1707.773 kb on + strand, within Echvi_1489 at 1707.796 kb on + strand, within Echvi_1489 at 1707.796 kb on + strand, within Echvi_1489 at 1707.797 kb on - strand, within Echvi_1489 at 1707.797 kb on - strand, within Echvi_1489 at 1707.797 kb on - strand, within Echvi_1489 at 1707.806 kb on - strand, within Echvi_1489 at 1707.821 kb on + strand, within Echvi_1489 at 1707.821 kb on + strand, within Echvi_1489 at 1707.899 kb on + strand, within Echvi_1489 at 1707.900 kb on - strand, within Echvi_1489 at 1707.923 kb on + strand, within Echvi_1489 at 1707.923 kb on + strand, within Echvi_1489 at 1707.924 kb on - strand, within Echvi_1489 at 1707.924 kb on - strand, within Echvi_1489 at 1707.924 kb on - strand, within Echvi_1489 at 1708.046 kb on + strand, within Echvi_1489 at 1708.047 kb on - strand, within Echvi_1489 at 1708.131 kb on - strand, within Echvi_1489 at 1708.178 kb on + strand, within Echvi_1489 at 1708.290 kb on + strand, within Echvi_1489 at 1708.291 kb on - strand, within Echvi_1489 at 1708.291 kb on - strand, within Echvi_1489 at 1708.308 kb on + strand, within Echvi_1489 at 1708.371 kb on - strand, within Echvi_1489 at 1708.421 kb on + strand, within Echvi_1489 at 1708.487 kb on + strand, within Echvi_1489 at 1708.487 kb on + strand, within Echvi_1489 at 1708.530 kb on + strand at 1708.531 kb on - strand at 1708.578 kb on - strand at 1708.578 kb on - strand at 1708.648 kb on + strand at 1708.648 kb on + strand at 1708.648 kb on + strand at 1708.651 kb on - strand at 1708.651 kb on - strand at 1708.651 kb on - strand at 1708.651 kb on - strand at 1708.722 kb on + strand at 1708.723 kb on - strand at 1708.732 kb on - strand at 1708.811 kb on + strand at 1708.830 kb on + strand at 1708.830 kb on + strand at 1708.831 kb on - strand at 1708.831 kb on - strand at 1708.894 kb on + strand at 1708.894 kb on + strand at 1708.931 kb on + strand at 1708.934 kb on - strand at 1709.038 kb on + strand, within Echvi_1490 at 1709.050 kb on + strand, within Echvi_1490 at 1709.050 kb on + strand, within Echvi_1490 at 1709.050 kb on + strand, within Echvi_1490 at 1709.050 kb on + strand, within Echvi_1490 at 1709.228 kb on + strand, within Echvi_1490 at 1709.255 kb on + strand, within Echvi_1490 at 1709.255 kb on + strand, within Echvi_1490 at 1709.256 kb on - strand, within Echvi_1490 at 1709.343 kb on + strand, within Echvi_1490 at 1709.343 kb on + strand, within Echvi_1490 at 1709.344 kb on - strand, within Echvi_1490 at 1709.344 kb on - strand, within Echvi_1490 at 1709.345 kb on + strand, within Echvi_1490 at 1709.345 kb on + strand, within Echvi_1490 at 1709.345 kb on + strand, within Echvi_1490 at 1709.345 kb on + strand, within Echvi_1490 at 1709.345 kb on + strand, within Echvi_1490 at 1709.346 kb on - strand, within Echvi_1490 at 1709.346 kb on - strand, within Echvi_1490 at 1709.346 kb on - strand, within Echvi_1490 at 1709.346 kb on - strand, within Echvi_1490 at 1709.346 kb on - strand, within Echvi_1490 at 1709.453 kb on + strand, within Echvi_1490 at 1709.453 kb on + strand, within Echvi_1490 at 1709.453 kb on + strand, within Echvi_1490 at 1709.485 kb on - strand, within Echvi_1490 at 1709.515 kb on + strand, within Echvi_1490 at 1709.516 kb on - strand, within Echvi_1490 at 1709.517 kb on + strand, within Echvi_1490 at 1709.539 kb on - strand, within Echvi_1490 at 1709.539 kb on - strand, within Echvi_1490 at 1709.632 kb on + strand, within Echvi_1490 at 1709.632 kb on + strand, within Echvi_1490 at 1709.634 kb on + strand, within Echvi_1490 at 1709.649 kb on + strand, within Echvi_1490 at 1709.681 kb on + strand, within Echvi_1490 at 1709.723 kb on + strand, within Echvi_1490 at 1709.760 kb on + strand, within Echvi_1490 at 1709.837 kb on + strand, within Echvi_1490 at 1709.882 kb on + strand, within Echvi_1490 at 1709.882 kb on + strand, within Echvi_1490 at 1709.882 kb on + strand, within Echvi_1490 at 1709.882 kb on + strand at 1709.882 kb on + strand, within Echvi_1490 at 1709.883 kb on - strand, within Echvi_1490 at 1709.883 kb on - strand, within Echvi_1490 at 1709.883 kb on - strand, within Echvi_1490 at 1709.883 kb on - strand, within Echvi_1490 at 1709.883 kb on - strand, within Echvi_1490 at 1709.901 kb on + strand, within Echvi_1490 at 1709.901 kb on + strand, within Echvi_1490 at 1709.901 kb on + strand, within Echvi_1490 at 1709.901 kb on + strand, within Echvi_1490 at 1709.901 kb on + strand, within Echvi_1490 at 1709.902 kb on - strand, within Echvi_1490 at 1709.902 kb on - strand, within Echvi_1490 at 1709.902 kb on - strand, within Echvi_1490 at 1709.902 kb on - strand, within Echvi_1490 at 1709.902 kb on - strand, within Echvi_1490 at 1709.902 kb on - strand, within Echvi_1490 at 1709.902 kb on - strand, within Echvi_1490 at 1709.910 kb on - strand, within Echvi_1490 at 1709.948 kb on + strand, within Echvi_1490 at 1710.002 kb on + strand, within Echvi_1490 at 1710.003 kb on - strand, within Echvi_1490 at 1710.003 kb on - strand, within Echvi_1490 at 1710.003 kb on - strand, within Echvi_1490 at 1710.160 kb on - strand, within Echvi_1490 at 1710.209 kb on + strand, within Echvi_1490 at 1710.209 kb on + strand, within Echvi_1490 at 1710.281 kb on + strand, within Echvi_1490 at 1710.302 kb on - strand, within Echvi_1490 at 1710.383 kb on - strand, within Echvi_1490 at 1710.383 kb on - strand, within Echvi_1490 at 1710.416 kb on + strand, within Echvi_1490 at 1710.417 kb on - strand, within Echvi_1490 at 1710.417 kb on - strand, within Echvi_1490 at 1710.421 kb on + strand, within Echvi_1490 at 1710.421 kb on + strand, within Echvi_1490 at 1710.422 kb on - strand, within Echvi_1490 at 1710.422 kb on - strand, within Echvi_1490 at 1710.422 kb on - strand, within Echvi_1490 at 1710.422 kb on - strand, within Echvi_1490 at 1710.423 kb on + strand, within Echvi_1490 at 1710.423 kb on + strand, within Echvi_1490 at 1710.424 kb on - strand, within Echvi_1490 at 1710.424 kb on - strand, within Echvi_1490 at 1710.674 kb on + strand, within Echvi_1490 at 1710.754 kb on - strand, within Echvi_1490 at 1710.842 kb on - strand, within Echvi_1490 at 1710.896 kb on + strand, within Echvi_1490 at 1710.983 kb on + strand at 1710.984 kb on - strand at 1710.984 kb on - strand at 1711.011 kb on + strand at 1711.072 kb on - strand at 1711.072 kb on - strand at 1711.074 kb on - strand at 1711.097 kb on - strand at 1711.178 kb on + strand at 1711.179 kb on - strand at 1711.179 kb on - strand at 1711.358 kb on + strand, within Echvi_1491 at 1711.397 kb on - strand, within Echvi_1491 at 1711.449 kb on + strand, within Echvi_1491 at 1711.460 kb on + strand, within Echvi_1491 at 1711.463 kb on - strand, within Echvi_1491 at 1711.563 kb on - strand at 1711.570 kb on - strand at 1711.709 kb on + strand, within Echvi_1492 at 1711.821 kb on - strand, within Echvi_1492 at 1711.822 kb on + strand, within Echvi_1492 at 1711.822 kb on + strand, within Echvi_1492 at 1711.892 kb on + strand, within Echvi_1492 at 1711.988 kb on + strand at 1712.013 kb on + strand at 1712.014 kb on - strand at 1712.072 kb on + strand at 1712.072 kb on + strand at 1712.072 kb on + strand at 1712.073 kb on - strand at 1712.073 kb on - strand at 1712.073 kb on - strand at 1712.078 kb on + strand at 1712.079 kb on - strand at 1712.079 kb on - strand at 1712.079 kb on - strand at 1712.099 kb on + strand at 1712.099 kb on + strand at 1712.101 kb on + strand at 1712.101 kb on + strand at 1712.111 kb on - strand at 1712.147 kb on + strand at 1712.157 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 1,707,773 + Echvi_1489 0.24 -0.3 1,707,796 + Echvi_1489 0.26 -1.2 1,707,796 + Echvi_1489 0.26 -2.1 1,707,797 - Echvi_1489 0.26 -2.9 1,707,797 - Echvi_1489 0.26 -0.2 1,707,797 - Echvi_1489 0.26 -0.2 1,707,806 - Echvi_1489 0.27 -0.7 1,707,821 + Echvi_1489 0.28 +0.1 1,707,821 + Echvi_1489 0.28 -2.9 1,707,899 + Echvi_1489 0.35 -0.8 1,707,900 - Echvi_1489 0.35 -0.2 1,707,923 + Echvi_1489 0.37 +0.0 1,707,923 + Echvi_1489 0.37 -0.8 1,707,924 - Echvi_1489 0.37 -1.3 1,707,924 - Echvi_1489 0.37 +0.1 1,707,924 - Echvi_1489 0.37 +0.4 1,708,046 + Echvi_1489 0.48 +0.4 1,708,047 - Echvi_1489 0.49 -1.9 1,708,131 - Echvi_1489 0.56 -0.5 1,708,178 + Echvi_1489 0.60 -2.2 1,708,290 + Echvi_1489 0.70 -0.5 1,708,291 - Echvi_1489 0.71 -0.5 1,708,291 - Echvi_1489 0.71 -1.2 1,708,308 + Echvi_1489 0.72 -2.2 1,708,371 - Echvi_1489 0.78 -1.0 1,708,421 + Echvi_1489 0.82 -2.3 1,708,487 + Echvi_1489 0.88 +1.7 1,708,487 + Echvi_1489 0.88 -0.8 1,708,530 + -1.1 1,708,531 - -2.0 1,708,578 - -1.2 1,708,578 - -0.5 1,708,648 + -1.0 1,708,648 + -0.8 1,708,648 + +0.1 1,708,651 - -1.1 1,708,651 - -0.9 1,708,651 - +0.5 1,708,651 - +0.5 1,708,722 + -0.7 1,708,723 - -0.3 1,708,732 - -0.5 1,708,811 + -2.2 1,708,830 + -0.3 1,708,830 + -0.6 1,708,831 - -0.3 1,708,831 - +1.4 1,708,894 + -1.0 1,708,894 + +0.8 1,708,931 + -2.3 1,708,934 - -0.0 1,709,038 + Echvi_1490 0.13 -0.2 1,709,050 + Echvi_1490 0.13 +0.5 1,709,050 + Echvi_1490 0.13 -1.1 1,709,050 + Echvi_1490 0.13 -0.9 1,709,050 + Echvi_1490 0.13 -0.5 1,709,228 + Echvi_1490 0.21 -0.8 1,709,255 + Echvi_1490 0.22 -0.2 1,709,255 + Echvi_1490 0.22 -0.6 1,709,256 - Echvi_1490 0.22 -0.8 1,709,343 + Echvi_1490 0.25 -0.9 1,709,343 + Echvi_1490 0.25 -0.6 1,709,344 - Echvi_1490 0.25 -1.2 1,709,344 - Echvi_1490 0.25 +1.1 1,709,345 + Echvi_1490 0.25 -0.0 1,709,345 + Echvi_1490 0.25 -0.1 1,709,345 + Echvi_1490 0.25 -2.1 1,709,345 + Echvi_1490 0.25 +0.9 1,709,345 + Echvi_1490 0.25 -0.2 1,709,346 - Echvi_1490 0.25 +0.1 1,709,346 - Echvi_1490 0.25 -0.6 1,709,346 - Echvi_1490 0.25 +0.9 1,709,346 - Echvi_1490 0.25 -0.2 1,709,346 - Echvi_1490 0.25 +0.6 1,709,453 + Echvi_1490 0.30 +0.0 1,709,453 + Echvi_1490 0.30 -0.8 1,709,453 + Echvi_1490 0.30 +0.2 1,709,485 - Echvi_1490 0.31 +0.0 1,709,515 + Echvi_1490 0.32 -0.3 1,709,516 - Echvi_1490 0.32 +0.5 1,709,517 + Echvi_1490 0.32 +0.7 1,709,539 - Echvi_1490 0.33 +0.0 1,709,539 - Echvi_1490 0.33 +0.2 1,709,632 + Echvi_1490 0.37 +0.4 1,709,632 + Echvi_1490 0.37 -0.8 1,709,634 + Echvi_1490 0.37 -0.8 1,709,649 + Echvi_1490 0.38 +1.0 1,709,681 + Echvi_1490 0.39 +0.4 1,709,723 + Echvi_1490 0.41 +0.2 1,709,760 + Echvi_1490 0.42 -0.4 1,709,837 + Echvi_1490 0.45 +1.7 1,709,882 + Echvi_1490 0.47 +0.8 1,709,882 + Echvi_1490 0.47 +1.2 1,709,882 + Echvi_1490 0.47 +0.4 1,709,882 + +4.0 1,709,882 + Echvi_1490 0.47 -1.0 1,709,883 - Echvi_1490 0.47 +0.2 1,709,883 - Echvi_1490 0.47 -0.6 1,709,883 - Echvi_1490 0.47 -0.2 1,709,883 - Echvi_1490 0.47 -0.2 1,709,883 - Echvi_1490 0.47 +0.5 1,709,901 + Echvi_1490 0.48 -2.2 1,709,901 + Echvi_1490 0.48 -0.5 1,709,901 + Echvi_1490 0.48 +0.5 1,709,901 + Echvi_1490 0.48 -0.1 1,709,901 + Echvi_1490 0.48 +0.7 1,709,902 - Echvi_1490 0.48 +0.0 1,709,902 - Echvi_1490 0.48 -1.8 1,709,902 - Echvi_1490 0.48 +0.7 1,709,902 - Echvi_1490 0.48 -0.6 1,709,902 - Echvi_1490 0.48 +1.4 1,709,902 - Echvi_1490 0.48 -0.2 1,709,902 - Echvi_1490 0.48 +0.1 1,709,910 - Echvi_1490 0.48 -0.9 1,709,948 + Echvi_1490 0.50 -1.0 1,710,002 + Echvi_1490 0.52 -0.5 1,710,003 - Echvi_1490 0.52 -0.1 1,710,003 - Echvi_1490 0.52 -1.4 1,710,003 - Echvi_1490 0.52 +0.0 1,710,160 - Echvi_1490 0.58 -0.0 1,710,209 + Echvi_1490 0.60 +0.2 1,710,209 + Echvi_1490 0.60 +0.4 1,710,281 + Echvi_1490 0.63 +2.4 1,710,302 - Echvi_1490 0.64 -0.6 1,710,383 - Echvi_1490 0.67 +0.0 1,710,383 - Echvi_1490 0.67 +0.8 1,710,416 + Echvi_1490 0.69 -0.8 1,710,417 - Echvi_1490 0.69 +0.4 1,710,417 - Echvi_1490 0.69 +0.7 1,710,421 + Echvi_1490 0.69 +0.5 1,710,421 + Echvi_1490 0.69 +1.4 1,710,422 - Echvi_1490 0.69 -2.1 1,710,422 - Echvi_1490 0.69 +0.2 1,710,422 - Echvi_1490 0.69 -0.2 1,710,422 - Echvi_1490 0.69 -0.2 1,710,423 + Echvi_1490 0.69 -0.5 1,710,423 + Echvi_1490 0.69 +0.1 1,710,424 - Echvi_1490 0.69 -0.1 1,710,424 - Echvi_1490 0.69 +0.2 1,710,674 + Echvi_1490 0.79 +0.9 1,710,754 - Echvi_1490 0.83 -1.1 1,710,842 - Echvi_1490 0.86 -0.2 1,710,896 + Echvi_1490 0.88 -0.5 1,710,983 + -2.1 1,710,984 - +0.4 1,710,984 - -1.3 1,711,011 + -1.0 1,711,072 - +0.0 1,711,072 - -1.2 1,711,074 - +0.0 1,711,097 - +0.7 1,711,178 + -1.4 1,711,179 - +1.2 1,711,179 - -1.2 1,711,358 + Echvi_1491 0.40 +1.2 1,711,397 - Echvi_1491 0.51 -0.5 1,711,449 + Echvi_1491 0.67 -1.7 1,711,460 + Echvi_1491 0.70 -0.4 1,711,463 - Echvi_1491 0.71 -0.7 1,711,563 - -1.0 1,711,570 - -0.9 1,711,709 + Echvi_1492 0.20 +2.2 1,711,821 - Echvi_1492 0.52 -0.4 1,711,822 + Echvi_1492 0.52 +1.0 1,711,822 + Echvi_1492 0.52 +2.1 1,711,892 + Echvi_1492 0.72 +0.4 1,711,988 + +0.7 1,712,013 + -0.6 1,712,014 - -1.6 1,712,072 + -0.8 1,712,072 + +0.0 1,712,072 + +0.7 1,712,073 - +1.0 1,712,073 - +1.0 1,712,073 - +2.4 1,712,078 + +0.4 1,712,079 - -0.1 1,712,079 - -1.2 1,712,079 - -1.4 1,712,099 + +0.7 1,712,099 + +0.7 1,712,101 + -0.1 1,712,101 + -0.4 1,712,111 - -1.3 1,712,147 + -0.7 1,712,157 - -0.5
Or see this region's nucleotide sequence