Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1071 and Echvi_1072 are separated by 149 nucleotides Echvi_1072 and Echvi_1073 are separated by 59 nucleotides Echvi_1073 and Echvi_1074 are separated by 876 nucleotides
Echvi_1071: Echvi_1071 - acetyl-CoA acetyltransferases, at 1,231,535 to 1,232,710
_1071
Echvi_1072: Echvi_1072 - S23 ribosomal protein., at 1,232,860 to 1,233,210
_1072
Echvi_1073: Echvi_1073 - Acyl-CoA dehydrogenases, at 1,233,270 to 1,235,069
_1073
Echvi_1074: Echvi_1074 - hypothetical protein, at 1,235,946 to 1,236,080
_1074
Position (kb)
1233
1234
1235
1236 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1232.440 kb on + strand, within Echvi_1071 at 1232.533 kb on + strand, within Echvi_1071 at 1232.533 kb on + strand, within Echvi_1071 at 1232.578 kb on - strand, within Echvi_1071 at 1232.584 kb on + strand, within Echvi_1071 at 1232.584 kb on + strand, within Echvi_1071 at 1232.585 kb on - strand, within Echvi_1071 at 1232.642 kb on + strand at 1232.708 kb on + strand at 1232.708 kb on + strand at 1232.708 kb on + strand at 1232.709 kb on - strand at 1232.722 kb on + strand at 1232.725 kb on + strand at 1232.726 kb on - strand at 1232.760 kb on + strand at 1232.761 kb on - strand at 1232.780 kb on - strand at 1232.780 kb on - strand at 1232.780 kb on - strand at 1232.855 kb on - strand at 1232.866 kb on - strand at 1232.870 kb on - strand at 1232.871 kb on + strand at 1232.872 kb on - strand at 1232.885 kb on + strand at 1232.920 kb on + strand, within Echvi_1072 at 1232.920 kb on + strand, within Echvi_1072 at 1232.920 kb on + strand, within Echvi_1072 at 1232.934 kb on + strand, within Echvi_1072 at 1232.956 kb on + strand, within Echvi_1072 at 1232.956 kb on + strand, within Echvi_1072 at 1232.957 kb on - strand, within Echvi_1072 at 1232.957 kb on - strand, within Echvi_1072 at 1233.054 kb on + strand, within Echvi_1072 at 1233.055 kb on - strand, within Echvi_1072 at 1233.062 kb on + strand, within Echvi_1072 at 1233.062 kb on + strand, within Echvi_1072 at 1233.062 kb on + strand, within Echvi_1072 at 1233.062 kb on + strand, within Echvi_1072 at 1233.062 kb on + strand, within Echvi_1072 at 1233.062 kb on + strand, within Echvi_1072 at 1233.062 kb on + strand, within Echvi_1072 at 1233.062 kb on + strand, within Echvi_1072 at 1233.062 kb on + strand, within Echvi_1072 at 1233.062 kb on + strand, within Echvi_1072 at 1233.062 kb on + strand, within Echvi_1072 at 1233.063 kb on - strand, within Echvi_1072 at 1233.063 kb on - strand, within Echvi_1072 at 1233.063 kb on - strand, within Echvi_1072 at 1233.063 kb on - strand, within Echvi_1072 at 1233.063 kb on - strand, within Echvi_1072 at 1233.063 kb on - strand, within Echvi_1072 at 1233.063 kb on - strand, within Echvi_1072 at 1233.063 kb on - strand, within Echvi_1072 at 1233.067 kb on + strand, within Echvi_1072 at 1233.068 kb on - strand, within Echvi_1072 at 1233.090 kb on + strand, within Echvi_1072 at 1233.090 kb on + strand, within Echvi_1072 at 1233.090 kb on + strand, within Echvi_1072 at 1233.098 kb on + strand, within Echvi_1072 at 1233.098 kb on + strand, within Echvi_1072 at 1233.098 kb on + strand, within Echvi_1072 at 1233.098 kb on + strand, within Echvi_1072 at 1233.098 kb on + strand, within Echvi_1072 at 1233.099 kb on - strand, within Echvi_1072 at 1233.099 kb on - strand, within Echvi_1072 at 1233.099 kb on - strand, within Echvi_1072 at 1233.099 kb on - strand, within Echvi_1072 at 1233.099 kb on - strand, within Echvi_1072 at 1233.099 kb on - strand, within Echvi_1072 at 1233.099 kb on - strand, within Echvi_1072 at 1233.102 kb on + strand, within Echvi_1072 at 1233.123 kb on - strand, within Echvi_1072 at 1233.184 kb on + strand at 1233.185 kb on - strand at 1233.185 kb on - strand at 1233.185 kb on - strand at 1233.208 kb on + strand at 1233.208 kb on + strand at 1233.221 kb on + strand at 1233.221 kb on + strand at 1233.221 kb on + strand at 1233.222 kb on - strand at 1233.226 kb on + strand at 1233.226 kb on + strand at 1233.226 kb on + strand at 1233.227 kb on - strand at 1233.227 kb on - strand at 1233.227 kb on - strand at 1233.229 kb on + strand at 1233.246 kb on + strand at 1233.250 kb on + strand at 1233.250 kb on + strand at 1233.251 kb on - strand at 1233.287 kb on + strand at 1233.287 kb on + strand at 1233.398 kb on + strand at 1233.440 kb on + strand at 1233.440 kb on + strand at 1233.496 kb on + strand, within Echvi_1073 at 1233.496 kb on + strand, within Echvi_1073 at 1233.497 kb on - strand, within Echvi_1073 at 1233.497 kb on - strand, within Echvi_1073 at 1233.522 kb on + strand, within Echvi_1073 at 1233.604 kb on - strand, within Echvi_1073 at 1233.604 kb on - strand, within Echvi_1073 at 1233.615 kb on - strand, within Echvi_1073 at 1233.643 kb on - strand, within Echvi_1073 at 1233.643 kb on - strand, within Echvi_1073 at 1233.645 kb on + strand, within Echvi_1073 at 1233.646 kb on - strand, within Echvi_1073 at 1233.672 kb on + strand, within Echvi_1073 at 1233.792 kb on + strand, within Echvi_1073 at 1233.792 kb on + strand, within Echvi_1073 at 1233.793 kb on - strand, within Echvi_1073 at 1233.965 kb on + strand, within Echvi_1073 at 1234.061 kb on + strand, within Echvi_1073 at 1234.062 kb on - strand, within Echvi_1073 at 1234.131 kb on + strand, within Echvi_1073 at 1234.131 kb on + strand, within Echvi_1073 at 1234.169 kb on + strand, within Echvi_1073 at 1234.218 kb on + strand, within Echvi_1073 at 1234.240 kb on - strand, within Echvi_1073 at 1234.325 kb on - strand, within Echvi_1073 at 1234.383 kb on + strand, within Echvi_1073 at 1234.383 kb on + strand, within Echvi_1073 at 1234.383 kb on + strand, within Echvi_1073 at 1234.384 kb on - strand, within Echvi_1073 at 1234.384 kb on - strand, within Echvi_1073 at 1234.384 kb on - strand, within Echvi_1073 at 1234.384 kb on - strand, within Echvi_1073 at 1234.384 kb on - strand, within Echvi_1073 at 1234.384 kb on - strand, within Echvi_1073 at 1234.425 kb on + strand, within Echvi_1073 at 1234.482 kb on + strand, within Echvi_1073 at 1234.482 kb on + strand, within Echvi_1073 at 1234.482 kb on + strand, within Echvi_1073 at 1234.482 kb on + strand, within Echvi_1073 at 1234.482 kb on + strand, within Echvi_1073 at 1234.482 kb on + strand, within Echvi_1073 at 1234.483 kb on - strand, within Echvi_1073 at 1234.483 kb on - strand, within Echvi_1073 at 1234.483 kb on - strand, within Echvi_1073 at 1234.661 kb on - strand, within Echvi_1073 at 1234.772 kb on - strand, within Echvi_1073 at 1234.779 kb on + strand, within Echvi_1073 at 1234.779 kb on + strand, within Echvi_1073 at 1234.780 kb on - strand, within Echvi_1073 at 1234.780 kb on - strand, within Echvi_1073 at 1234.780 kb on - strand, within Echvi_1073 at 1234.820 kb on + strand, within Echvi_1073 at 1234.864 kb on + strand, within Echvi_1073 at 1234.865 kb on - strand, within Echvi_1073 at 1234.873 kb on - strand, within Echvi_1073 at 1234.893 kb on - strand at 1234.910 kb on + strand at 1235.053 kb on - strand at 1235.053 kb on - strand at 1235.053 kb on - strand at 1235.058 kb on + strand at 1235.058 kb on + strand at 1235.059 kb on - strand at 1235.094 kb on - strand at 1235.094 kb on - strand at 1235.140 kb on + strand at 1235.154 kb on - strand at 1235.154 kb on - strand at 1235.210 kb on + strand at 1235.211 kb on - strand at 1235.211 kb on - strand at 1235.215 kb on + strand at 1235.215 kb on + strand at 1235.216 kb on - strand at 1235.293 kb on + strand at 1235.293 kb on + strand at 1235.293 kb on + strand at 1235.293 kb on + strand at 1235.294 kb on - strand at 1235.294 kb on - strand at 1235.294 kb on - strand at 1235.317 kb on + strand at 1235.371 kb on - strand at 1235.371 kb on - strand at 1235.395 kb on - strand at 1235.395 kb on - strand at 1235.571 kb on - strand at 1235.707 kb on + strand at 1235.713 kb on + strand at 1235.723 kb on + strand at 1235.723 kb on + strand at 1235.723 kb on + strand at 1235.737 kb on + strand at 1235.737 kb on + strand at 1235.737 kb on + strand at 1235.737 kb on + strand at 1235.737 kb on + strand at 1235.778 kb on - strand at 1235.833 kb on + strand at 1235.838 kb on + strand at 1235.895 kb on + strand at 1235.908 kb on + strand at 1235.908 kb on + strand at 1235.909 kb on - strand at 1235.985 kb on + strand, within Echvi_1074 at 1235.985 kb on + strand, within Echvi_1074 at 1235.985 kb on + strand, within Echvi_1074 at 1235.985 kb on + strand, within Echvi_1074 at 1235.985 kb on + strand, within Echvi_1074 at 1235.986 kb on - strand, within Echvi_1074 at 1235.986 kb on - strand, within Echvi_1074 at 1235.987 kb on + strand, within Echvi_1074 at 1235.987 kb on + strand, within Echvi_1074 at 1235.987 kb on + strand, within Echvi_1074 at 1235.988 kb on - strand, within Echvi_1074 at 1236.004 kb on - strand, within Echvi_1074 at 1236.020 kb on + strand, within Echvi_1074 at 1236.021 kb on - strand, within Echvi_1074 at 1236.047 kb on + strand, within Echvi_1074 at 1236.048 kb on - strand, within Echvi_1074
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 1,232,440 + Echvi_1071 0.77 -0.7 1,232,533 + Echvi_1071 0.85 +1.7 1,232,533 + Echvi_1071 0.85 -0.4 1,232,578 - Echvi_1071 0.89 -0.5 1,232,584 + Echvi_1071 0.89 +0.2 1,232,584 + Echvi_1071 0.89 -0.5 1,232,585 - Echvi_1071 0.89 +0.3 1,232,642 + -0.1 1,232,708 + -0.8 1,232,708 + -0.8 1,232,708 + -0.5 1,232,709 - +1.9 1,232,722 + -0.3 1,232,725 + +0.4 1,232,726 - -2.2 1,232,760 + -0.7 1,232,761 - -0.4 1,232,780 - +0.3 1,232,780 - -1.2 1,232,780 - -1.0 1,232,855 - +1.6 1,232,866 - -0.6 1,232,870 - +0.3 1,232,871 + -0.4 1,232,872 - +0.9 1,232,885 + -0.7 1,232,920 + Echvi_1072 0.17 +0.9 1,232,920 + Echvi_1072 0.17 -1.0 1,232,920 + Echvi_1072 0.17 -1.6 1,232,934 + Echvi_1072 0.21 -1.1 1,232,956 + Echvi_1072 0.27 +0.9 1,232,956 + Echvi_1072 0.27 -1.0 1,232,957 - Echvi_1072 0.28 +1.9 1,232,957 - Echvi_1072 0.28 +0.4 1,233,054 + Echvi_1072 0.55 -0.5 1,233,055 - Echvi_1072 0.56 -0.3 1,233,062 + Echvi_1072 0.58 -1.3 1,233,062 + Echvi_1072 0.58 -0.6 1,233,062 + Echvi_1072 0.58 -0.2 1,233,062 + Echvi_1072 0.58 +0.4 1,233,062 + Echvi_1072 0.58 +0.9 1,233,062 + Echvi_1072 0.58 -0.8 1,233,062 + Echvi_1072 0.58 -0.7 1,233,062 + Echvi_1072 0.58 -3.3 1,233,062 + Echvi_1072 0.58 -1.1 1,233,062 + Echvi_1072 0.58 -0.2 1,233,062 + Echvi_1072 0.58 -2.1 1,233,063 - Echvi_1072 0.58 -0.2 1,233,063 - Echvi_1072 0.58 -0.5 1,233,063 - Echvi_1072 0.58 -1.1 1,233,063 - Echvi_1072 0.58 -1.1 1,233,063 - Echvi_1072 0.58 -0.6 1,233,063 - Echvi_1072 0.58 -0.8 1,233,063 - Echvi_1072 0.58 -0.0 1,233,063 - Echvi_1072 0.58 -1.1 1,233,067 + Echvi_1072 0.59 -0.6 1,233,068 - Echvi_1072 0.59 -0.7 1,233,090 + Echvi_1072 0.66 -1.3 1,233,090 + Echvi_1072 0.66 -1.5 1,233,090 + Echvi_1072 0.66 +1.6 1,233,098 + Echvi_1072 0.68 +0.3 1,233,098 + Echvi_1072 0.68 -1.4 1,233,098 + Echvi_1072 0.68 -0.0 1,233,098 + Echvi_1072 0.68 +1.3 1,233,098 + Echvi_1072 0.68 -2.1 1,233,099 - Echvi_1072 0.68 +0.3 1,233,099 - Echvi_1072 0.68 -0.4 1,233,099 - Echvi_1072 0.68 -1.1 1,233,099 - Echvi_1072 0.68 +0.7 1,233,099 - Echvi_1072 0.68 +0.0 1,233,099 - Echvi_1072 0.68 -1.7 1,233,099 - Echvi_1072 0.68 +1.4 1,233,102 + Echvi_1072 0.69 -1.3 1,233,123 - Echvi_1072 0.75 -1.3 1,233,184 + -0.1 1,233,185 - -0.3 1,233,185 - -1.0 1,233,185 - +0.3 1,233,208 + -1.0 1,233,208 + +1.2 1,233,221 + -1.3 1,233,221 + -1.2 1,233,221 + -0.1 1,233,222 - -0.6 1,233,226 + +0.1 1,233,226 + -0.6 1,233,226 + -1.0 1,233,227 - +0.3 1,233,227 - +0.9 1,233,227 - +0.1 1,233,229 + -0.1 1,233,246 + -0.7 1,233,250 + -0.7 1,233,250 + +0.3 1,233,251 - +0.4 1,233,287 + -1.0 1,233,287 + -0.9 1,233,398 + +0.6 1,233,440 + -1.4 1,233,440 + -0.3 1,233,496 + Echvi_1073 0.13 -0.9 1,233,496 + Echvi_1073 0.13 +0.9 1,233,497 - Echvi_1073 0.13 +0.2 1,233,497 - Echvi_1073 0.13 -0.5 1,233,522 + Echvi_1073 0.14 -0.1 1,233,604 - Echvi_1073 0.19 -1.0 1,233,604 - Echvi_1073 0.19 -0.0 1,233,615 - Echvi_1073 0.19 +2.4 1,233,643 - Echvi_1073 0.21 -0.4 1,233,643 - Echvi_1073 0.21 +0.6 1,233,645 + Echvi_1073 0.21 -1.2 1,233,646 - Echvi_1073 0.21 +0.3 1,233,672 + Echvi_1073 0.22 -1.9 1,233,792 + Echvi_1073 0.29 -2.0 1,233,792 + Echvi_1073 0.29 +0.0 1,233,793 - Echvi_1073 0.29 +0.0 1,233,965 + Echvi_1073 0.39 -1.5 1,234,061 + Echvi_1073 0.44 +0.3 1,234,062 - Echvi_1073 0.44 -0.5 1,234,131 + Echvi_1073 0.48 +1.2 1,234,131 + Echvi_1073 0.48 -0.3 1,234,169 + Echvi_1073 0.50 +0.7 1,234,218 + Echvi_1073 0.53 +2.4 1,234,240 - Echvi_1073 0.54 -1.6 1,234,325 - Echvi_1073 0.59 -0.0 1,234,383 + Echvi_1073 0.62 -0.5 1,234,383 + Echvi_1073 0.62 +0.3 1,234,383 + Echvi_1073 0.62 +0.9 1,234,384 - Echvi_1073 0.62 -1.0 1,234,384 - Echvi_1073 0.62 -0.9 1,234,384 - Echvi_1073 0.62 -0.2 1,234,384 - Echvi_1073 0.62 +0.0 1,234,384 - Echvi_1073 0.62 +0.4 1,234,384 - Echvi_1073 0.62 -0.1 1,234,425 + Echvi_1073 0.64 +0.7 1,234,482 + Echvi_1073 0.67 +1.2 1,234,482 + Echvi_1073 0.67 -0.7 1,234,482 + Echvi_1073 0.67 +1.3 1,234,482 + Echvi_1073 0.67 -0.9 1,234,482 + Echvi_1073 0.67 -0.0 1,234,482 + Echvi_1073 0.67 -0.6 1,234,483 - Echvi_1073 0.67 -0.1 1,234,483 - Echvi_1073 0.67 -0.5 1,234,483 - Echvi_1073 0.67 +0.2 1,234,661 - Echvi_1073 0.77 -0.9 1,234,772 - Echvi_1073 0.83 -0.1 1,234,779 + Echvi_1073 0.84 +0.2 1,234,779 + Echvi_1073 0.84 -1.2 1,234,780 - Echvi_1073 0.84 -0.5 1,234,780 - Echvi_1073 0.84 -0.4 1,234,780 - Echvi_1073 0.84 -0.6 1,234,820 + Echvi_1073 0.86 +0.3 1,234,864 + Echvi_1073 0.89 -1.0 1,234,865 - Echvi_1073 0.89 -0.8 1,234,873 - Echvi_1073 0.89 -0.7 1,234,893 - -0.3 1,234,910 + -2.9 1,235,053 - -0.5 1,235,053 - +0.2 1,235,053 - +0.2 1,235,058 + -0.1 1,235,058 + +0.1 1,235,059 - -1.6 1,235,094 - +0.4 1,235,094 - -1.0 1,235,140 + -0.1 1,235,154 - -0.6 1,235,154 - +2.1 1,235,210 + +0.9 1,235,211 - +0.7 1,235,211 - -0.1 1,235,215 + -1.3 1,235,215 + +0.1 1,235,216 - -0.4 1,235,293 + -0.5 1,235,293 + -1.9 1,235,293 + +0.3 1,235,293 + -0.1 1,235,294 - +1.3 1,235,294 - -1.7 1,235,294 - -0.7 1,235,317 + +2.2 1,235,371 - -0.5 1,235,371 - +0.0 1,235,395 - -2.1 1,235,395 - -0.4 1,235,571 - -2.1 1,235,707 + +1.2 1,235,713 + +1.3 1,235,723 + -2.1 1,235,723 + +0.9 1,235,723 + +1.0 1,235,737 + -1.0 1,235,737 + +0.6 1,235,737 + -1.0 1,235,737 + +0.3 1,235,737 + +0.4 1,235,778 - +1.6 1,235,833 + -0.9 1,235,838 + -2.2 1,235,895 + -2.2 1,235,908 + -1.8 1,235,908 + +0.7 1,235,909 - +0.3 1,235,985 + Echvi_1074 0.29 -1.6 1,235,985 + Echvi_1074 0.29 -0.2 1,235,985 + Echvi_1074 0.29 +0.5 1,235,985 + Echvi_1074 0.29 +0.4 1,235,985 + Echvi_1074 0.29 +0.9 1,235,986 - Echvi_1074 0.30 -1.2 1,235,986 - Echvi_1074 0.30 +1.0 1,235,987 + Echvi_1074 0.30 +1.2 1,235,987 + Echvi_1074 0.30 +0.1 1,235,987 + Echvi_1074 0.30 +0.7 1,235,988 - Echvi_1074 0.31 +0.5 1,236,004 - Echvi_1074 0.43 -0.4 1,236,020 + Echvi_1074 0.55 -0.2 1,236,021 - Echvi_1074 0.56 -0.5 1,236,047 + Echvi_1074 0.75 -0.1 1,236,048 - Echvi_1074 0.76 -1.1
Or see this region's nucleotide sequence