Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0481 and Echvi_0482 are separated by 221 nucleotides Echvi_0482 and Echvi_0483 are separated by 76 nucleotides Echvi_0483 and Echvi_0484 are separated by 34 nucleotides Echvi_0484 and Echvi_0485 are separated by 270 nucleotides
Echvi_0481: Echvi_0481 - NAD-dependent aldehyde dehydrogenases, at 529,441 to 530,970
_0481
Echvi_0482: Echvi_0482 - Uncharacterized protein conserved in bacteria, at 531,192 to 531,626
_0482
Echvi_0483: Echvi_0483 - hypothetical protein, at 531,703 to 532,836
_0483
Echvi_0484: Echvi_0484 - hypothetical protein, at 532,871 to 532,999
_0484
Echvi_0485: Echvi_0485 - Beta-galactosidase/beta-glucuronidase, at 533,270 to 536,386
_0485
Position (kb) 531
532
533 Strain fitness (log2 ratio) -2
-1
0
1
2 at 530.732 kb on - strand, within Echvi_0481 at 530.732 kb on - strand, within Echvi_0481 at 530.732 kb on - strand, within Echvi_0481 at 530.739 kb on - strand, within Echvi_0481 at 530.739 kb on - strand, within Echvi_0481 at 530.751 kb on - strand, within Echvi_0481 at 530.817 kb on - strand, within Echvi_0481 at 530.958 kb on - strand at 530.984 kb on + strand at 530.994 kb on + strand at 531.003 kb on + strand at 531.007 kb on + strand at 531.007 kb on + strand at 531.007 kb on + strand at 531.010 kb on - strand at 531.010 kb on - strand at 531.010 kb on - strand at 531.101 kb on - strand at 531.148 kb on + strand at 531.153 kb on + strand at 531.207 kb on - strand at 531.216 kb on - strand at 531.216 kb on - strand at 531.268 kb on + strand, within Echvi_0482 at 531.442 kb on - strand, within Echvi_0482 at 531.442 kb on - strand, within Echvi_0482 at 531.622 kb on + strand at 531.622 kb on + strand at 531.622 kb on + strand at 531.623 kb on - strand at 531.623 kb on - strand at 531.625 kb on - strand at 531.625 kb on - strand at 531.625 kb on - strand at 531.626 kb on + strand at 531.627 kb on + strand at 531.627 kb on + strand at 531.627 kb on + strand at 531.627 kb on + strand at 531.627 kb on + strand at 531.628 kb on - strand at 531.628 kb on - strand at 531.628 kb on - strand at 531.631 kb on + strand at 531.631 kb on + strand at 531.632 kb on - strand at 531.632 kb on - strand at 531.637 kb on - strand at 531.647 kb on + strand at 531.694 kb on + strand at 531.695 kb on - strand at 531.695 kb on - strand at 531.831 kb on + strand, within Echvi_0483 at 531.832 kb on - strand, within Echvi_0483 at 531.916 kb on - strand, within Echvi_0483 at 531.973 kb on - strand, within Echvi_0483 at 531.986 kb on - strand, within Echvi_0483 at 532.004 kb on + strand, within Echvi_0483 at 532.004 kb on + strand, within Echvi_0483 at 532.004 kb on + strand, within Echvi_0483 at 532.004 kb on + strand, within Echvi_0483 at 532.005 kb on - strand, within Echvi_0483 at 532.005 kb on - strand, within Echvi_0483 at 532.005 kb on - strand, within Echvi_0483 at 532.057 kb on + strand, within Echvi_0483 at 532.058 kb on - strand, within Echvi_0483 at 532.100 kb on + strand, within Echvi_0483 at 532.100 kb on + strand, within Echvi_0483 at 532.100 kb on + strand, within Echvi_0483 at 532.101 kb on - strand, within Echvi_0483 at 532.101 kb on - strand, within Echvi_0483 at 532.104 kb on + strand, within Echvi_0483 at 532.104 kb on + strand, within Echvi_0483 at 532.104 kb on + strand, within Echvi_0483 at 532.105 kb on - strand, within Echvi_0483 at 532.105 kb on - strand, within Echvi_0483 at 532.110 kb on - strand, within Echvi_0483 at 532.116 kb on + strand, within Echvi_0483 at 532.116 kb on + strand, within Echvi_0483 at 532.122 kb on - strand, within Echvi_0483 at 532.181 kb on + strand, within Echvi_0483 at 532.181 kb on + strand, within Echvi_0483 at 532.181 kb on + strand, within Echvi_0483 at 532.182 kb on - strand, within Echvi_0483 at 532.182 kb on - strand, within Echvi_0483 at 532.182 kb on - strand, within Echvi_0483 at 532.211 kb on + strand, within Echvi_0483 at 532.313 kb on + strand, within Echvi_0483 at 532.314 kb on - strand, within Echvi_0483 at 532.350 kb on + strand, within Echvi_0483 at 532.352 kb on + strand, within Echvi_0483 at 532.352 kb on + strand, within Echvi_0483 at 532.353 kb on - strand, within Echvi_0483 at 532.353 kb on - strand, within Echvi_0483 at 532.469 kb on - strand, within Echvi_0483 at 532.483 kb on + strand, within Echvi_0483 at 532.529 kb on + strand, within Echvi_0483 at 532.534 kb on + strand, within Echvi_0483 at 532.676 kb on + strand, within Echvi_0483 at 532.677 kb on - strand, within Echvi_0483 at 532.677 kb on - strand, within Echvi_0483 at 532.677 kb on - strand, within Echvi_0483 at 532.677 kb on - strand, within Echvi_0483 at 532.679 kb on + strand, within Echvi_0483 at 532.680 kb on - strand, within Echvi_0483 at 532.680 kb on - strand, within Echvi_0483 at 532.680 kb on - strand, within Echvi_0483 at 532.719 kb on + strand, within Echvi_0483 at 532.806 kb on + strand at 532.812 kb on + strand at 532.812 kb on + strand at 532.814 kb on + strand at 532.847 kb on + strand at 532.897 kb on + strand, within Echvi_0484 at 532.915 kb on - strand, within Echvi_0484 at 532.998 kb on - strand at 533.022 kb on + strand at 533.063 kb on + strand at 533.064 kb on - strand at 533.064 kb on - strand at 533.067 kb on - strand at 533.135 kb on + strand at 533.139 kb on + strand at 533.140 kb on - strand at 533.202 kb on + strand at 533.209 kb on + strand at 533.210 kb on - strand at 533.249 kb on - strand at 533.256 kb on + strand at 533.292 kb on + strand at 533.292 kb on + strand at 533.293 kb on - strand at 533.299 kb on - strand at 533.356 kb on + strand at 533.357 kb on - strand at 533.416 kb on + strand at 533.417 kb on - strand at 533.425 kb on + strand at 533.426 kb on - strand at 533.426 kb on - strand at 533.504 kb on + strand at 533.504 kb on + strand at 533.505 kb on - strand at 533.534 kb on - strand at 533.559 kb on - strand at 533.595 kb on + strand, within Echvi_0485 at 533.595 kb on + strand, within Echvi_0485 at 533.596 kb on - strand, within Echvi_0485 at 533.631 kb on + strand, within Echvi_0485 at 533.631 kb on + strand, within Echvi_0485 at 533.632 kb on - strand, within Echvi_0485 at 533.691 kb on + strand, within Echvi_0485 at 533.692 kb on - strand, within Echvi_0485 at 533.692 kb on - strand, within Echvi_0485 at 533.692 kb on - strand, within Echvi_0485 at 533.694 kb on + strand, within Echvi_0485 at 533.789 kb on + strand, within Echvi_0485 at 533.820 kb on + strand, within Echvi_0485
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 530,732 - Echvi_0481 0.84 -0.4 530,732 - Echvi_0481 0.84 -0.1 530,732 - Echvi_0481 0.84 -0.2 530,739 - Echvi_0481 0.85 -2.4 530,739 - Echvi_0481 0.85 +0.3 530,751 - Echvi_0481 0.86 -0.1 530,817 - Echvi_0481 0.90 +0.1 530,958 - -0.2 530,984 + +0.3 530,994 + +0.0 531,003 + +0.2 531,007 + -1.6 531,007 + +0.6 531,007 + +1.2 531,010 - +0.4 531,010 - -0.5 531,010 - -0.9 531,101 - +0.6 531,148 + +1.0 531,153 + +0.8 531,207 - +1.6 531,216 - -1.4 531,216 - -0.8 531,268 + Echvi_0482 0.17 +0.5 531,442 - Echvi_0482 0.57 +1.3 531,442 - Echvi_0482 0.57 +0.6 531,622 + +0.6 531,622 + -0.0 531,622 + +0.8 531,623 - -0.6 531,623 - +0.8 531,625 - -0.4 531,625 - -0.5 531,625 - -0.0 531,626 + -1.0 531,627 + +0.1 531,627 + +0.9 531,627 + -0.1 531,627 + -0.9 531,627 + -0.8 531,628 - +2.1 531,628 - +1.5 531,628 - +0.1 531,631 + -1.1 531,631 + +0.2 531,632 - +0.3 531,632 - +0.1 531,637 - +0.1 531,647 + -1.5 531,694 + +0.9 531,695 - -0.4 531,695 - +0.5 531,831 + Echvi_0483 0.11 -0.9 531,832 - Echvi_0483 0.11 -0.8 531,916 - Echvi_0483 0.19 -0.1 531,973 - Echvi_0483 0.24 +0.0 531,986 - Echvi_0483 0.25 +0.1 532,004 + Echvi_0483 0.27 -0.1 532,004 + Echvi_0483 0.27 +0.1 532,004 + Echvi_0483 0.27 -1.6 532,004 + Echvi_0483 0.27 +0.5 532,005 - Echvi_0483 0.27 -0.3 532,005 - Echvi_0483 0.27 -0.2 532,005 - Echvi_0483 0.27 -0.4 532,057 + Echvi_0483 0.31 -0.5 532,058 - Echvi_0483 0.31 +0.8 532,100 + Echvi_0483 0.35 -0.1 532,100 + Echvi_0483 0.35 -1.6 532,100 + Echvi_0483 0.35 +0.6 532,101 - Echvi_0483 0.35 -1.8 532,101 - Echvi_0483 0.35 -0.1 532,104 + Echvi_0483 0.35 -0.2 532,104 + Echvi_0483 0.35 +0.8 532,104 + Echvi_0483 0.35 -0.5 532,105 - Echvi_0483 0.35 -0.3 532,105 - Echvi_0483 0.35 +0.5 532,110 - Echvi_0483 0.36 -0.4 532,116 + Echvi_0483 0.36 -1.7 532,116 + Echvi_0483 0.36 +0.7 532,122 - Echvi_0483 0.37 +0.1 532,181 + Echvi_0483 0.42 +1.4 532,181 + Echvi_0483 0.42 -0.1 532,181 + Echvi_0483 0.42 -0.1 532,182 - Echvi_0483 0.42 -0.6 532,182 - Echvi_0483 0.42 +0.1 532,182 - Echvi_0483 0.42 -0.2 532,211 + Echvi_0483 0.45 +0.4 532,313 + Echvi_0483 0.54 -1.5 532,314 - Echvi_0483 0.54 -0.4 532,350 + Echvi_0483 0.57 -1.1 532,352 + Echvi_0483 0.57 -1.2 532,352 + Echvi_0483 0.57 +0.2 532,353 - Echvi_0483 0.57 -1.9 532,353 - Echvi_0483 0.57 -0.2 532,469 - Echvi_0483 0.68 -2.2 532,483 + Echvi_0483 0.69 +0.1 532,529 + Echvi_0483 0.73 -1.1 532,534 + Echvi_0483 0.73 -0.3 532,676 + Echvi_0483 0.86 -1.8 532,677 - Echvi_0483 0.86 -0.7 532,677 - Echvi_0483 0.86 +0.3 532,677 - Echvi_0483 0.86 -0.6 532,677 - Echvi_0483 0.86 +0.3 532,679 + Echvi_0483 0.86 -2.6 532,680 - Echvi_0483 0.86 +0.4 532,680 - Echvi_0483 0.86 +0.3 532,680 - Echvi_0483 0.86 +0.8 532,719 + Echvi_0483 0.90 -0.4 532,806 + +0.3 532,812 + -0.4 532,812 + -1.5 532,814 + -0.2 532,847 + -0.0 532,897 + Echvi_0484 0.20 -0.4 532,915 - Echvi_0484 0.34 -1.0 532,998 - -2.6 533,022 + -0.3 533,063 + -0.2 533,064 - +0.6 533,064 - +0.1 533,067 - -0.8 533,135 + -0.8 533,139 + -0.2 533,140 - +0.8 533,202 + -0.4 533,209 + -0.2 533,210 - +0.2 533,249 - -0.4 533,256 + +2.7 533,292 + -0.6 533,292 + +0.5 533,293 - -0.5 533,299 - -2.1 533,356 + -0.4 533,357 - +0.2 533,416 + +0.3 533,417 - -0.7 533,425 + +1.4 533,426 - +1.4 533,426 - -0.7 533,504 + +0.4 533,504 + -0.4 533,505 - +0.1 533,534 - +1.4 533,559 - -0.1 533,595 + Echvi_0485 0.10 -0.0 533,595 + Echvi_0485 0.10 -0.2 533,596 - Echvi_0485 0.10 +0.9 533,631 + Echvi_0485 0.12 +0.2 533,631 + Echvi_0485 0.12 +0.8 533,632 - Echvi_0485 0.12 +0.5 533,691 + Echvi_0485 0.14 +1.4 533,692 - Echvi_0485 0.14 +0.6 533,692 - Echvi_0485 0.14 -0.7 533,692 - Echvi_0485 0.14 +0.2 533,694 + Echvi_0485 0.14 -1.3 533,789 + Echvi_0485 0.17 +0.4 533,820 + Echvi_0485 0.18 -0.6
Or see this region's nucleotide sequence