Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21560 and CA264_21565 are separated by 103 nucleotides CA264_21565 and CA264_21570 are separated by 109 nucleotides CA264_21570 and CA264_21575 are separated by 68 nucleotides
CA264_21560: CA264_21560 - copper-translocating P-type ATPase, at 179,123 to 181,267
_21560
CA264_21565: CA264_21565 - hypothetical protein, at 181,371 to 181,721
_21565
CA264_21570: CA264_21570 - hypothetical protein, at 181,831 to 182,100
_21570
CA264_21575: CA264_21575 - (2Fe-2S)-binding protein, at 182,169 to 183,701
_21575
Position (kb) 181
182
183 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 180.858 kb on + strand, within CA264_21560 at 180.885 kb on + strand, within CA264_21560 at 180.981 kb on + strand, within CA264_21560 at 181.023 kb on + strand, within CA264_21560 at 181.029 kb on + strand, within CA264_21560 at 181.107 kb on + strand at 181.121 kb on + strand at 181.121 kb on + strand at 181.122 kb on - strand at 181.158 kb on + strand at 181.158 kb on + strand at 181.160 kb on + strand at 181.160 kb on + strand at 181.160 kb on + strand at 181.161 kb on - strand at 181.161 kb on - strand at 181.204 kb on - strand at 181.234 kb on + strand at 181.261 kb on + strand at 181.265 kb on + strand at 181.266 kb on - strand at 181.269 kb on - strand at 181.271 kb on + strand at 181.272 kb on - strand at 181.272 kb on - strand at 181.272 kb on - strand at 181.281 kb on + strand at 181.281 kb on + strand at 181.282 kb on - strand at 181.287 kb on - strand at 181.296 kb on + strand at 181.297 kb on - strand at 181.298 kb on + strand at 181.298 kb on + strand at 181.299 kb on - strand at 181.315 kb on - strand at 181.329 kb on - strand at 181.344 kb on + strand at 181.345 kb on - strand at 181.345 kb on - strand at 181.346 kb on + strand at 181.346 kb on + strand at 181.346 kb on + strand at 181.347 kb on - strand at 181.414 kb on + strand, within CA264_21565 at 181.414 kb on + strand, within CA264_21565 at 181.414 kb on + strand, within CA264_21565 at 181.415 kb on - strand, within CA264_21565 at 181.418 kb on - strand, within CA264_21565 at 181.418 kb on - strand, within CA264_21565 at 181.484 kb on + strand, within CA264_21565 at 181.505 kb on + strand, within CA264_21565 at 181.506 kb on - strand, within CA264_21565 at 181.534 kb on + strand, within CA264_21565 at 181.534 kb on + strand, within CA264_21565 at 181.534 kb on + strand, within CA264_21565 at 181.534 kb on + strand, within CA264_21565 at 181.538 kb on + strand, within CA264_21565 at 181.539 kb on - strand, within CA264_21565 at 181.539 kb on - strand, within CA264_21565 at 181.543 kb on + strand, within CA264_21565 at 181.543 kb on + strand, within CA264_21565 at 181.543 kb on + strand, within CA264_21565 at 181.544 kb on - strand, within CA264_21565 at 181.588 kb on + strand, within CA264_21565 at 181.591 kb on + strand, within CA264_21565 at 181.777 kb on - strand at 181.787 kb on + strand at 181.788 kb on - strand at 181.808 kb on - strand at 181.818 kb on + strand at 181.819 kb on - strand at 181.821 kb on + strand at 181.841 kb on + strand at 181.841 kb on + strand at 181.842 kb on - strand at 181.842 kb on - strand at 181.846 kb on - strand at 181.846 kb on - strand at 181.846 kb on - strand at 181.865 kb on + strand, within CA264_21570 at 181.865 kb on + strand, within CA264_21570 at 181.866 kb on - strand, within CA264_21570 at 181.866 kb on - strand, within CA264_21570 at 181.870 kb on + strand, within CA264_21570 at 181.931 kb on + strand, within CA264_21570 at 181.931 kb on + strand, within CA264_21570 at 181.932 kb on - strand, within CA264_21570 at 182.004 kb on + strand, within CA264_21570 at 182.039 kb on - strand, within CA264_21570 at 182.105 kb on - strand at 182.139 kb on + strand at 182.144 kb on - strand at 182.147 kb on + strand at 182.148 kb on - strand at 182.163 kb on + strand at 182.164 kb on - strand at 182.189 kb on + strand at 182.192 kb on - strand at 182.248 kb on - strand at 182.394 kb on + strand, within CA264_21575 at 182.420 kb on + strand, within CA264_21575 at 182.420 kb on + strand, within CA264_21575 at 182.420 kb on + strand, within CA264_21575 at 182.421 kb on - strand, within CA264_21575 at 182.426 kb on - strand, within CA264_21575 at 182.432 kb on + strand, within CA264_21575 at 182.487 kb on - strand, within CA264_21575 at 182.487 kb on - strand, within CA264_21575 at 182.494 kb on + strand, within CA264_21575 at 182.495 kb on - strand, within CA264_21575 at 182.550 kb on + strand, within CA264_21575 at 182.608 kb on + strand, within CA264_21575 at 182.609 kb on - strand, within CA264_21575 at 182.660 kb on + strand, within CA264_21575 at 182.716 kb on - strand, within CA264_21575 at 182.788 kb on + strand, within CA264_21575 at 182.808 kb on - strand, within CA264_21575 at 182.833 kb on + strand, within CA264_21575 at 182.834 kb on - strand, within CA264_21575 at 182.858 kb on + strand, within CA264_21575 at 182.880 kb on + strand, within CA264_21575 at 182.964 kb on + strand, within CA264_21575 at 182.964 kb on + strand, within CA264_21575 at 182.965 kb on - strand, within CA264_21575 at 182.975 kb on - strand at 182.992 kb on - strand, within CA264_21575 at 183.074 kb on + strand, within CA264_21575 at 183.075 kb on - strand, within CA264_21575
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 180,858 + CA264_21560 0.81 -0.3 180,885 + CA264_21560 0.82 -0.2 180,981 + CA264_21560 0.87 +0.2 181,023 + CA264_21560 0.89 +0.5 181,029 + CA264_21560 0.89 +0.1 181,107 + -0.0 181,121 + +0.7 181,121 + -0.3 181,122 - -0.6 181,158 + +0.2 181,158 + +0.9 181,160 + -1.5 181,160 + +0.7 181,160 + +0.2 181,161 - -0.3 181,161 - +1.7 181,204 - +0.6 181,234 + +0.1 181,261 + +1.0 181,265 + +0.4 181,266 - +0.2 181,269 - -1.1 181,271 + -0.6 181,272 - -1.1 181,272 - +0.2 181,272 - +0.1 181,281 + +1.7 181,281 + -0.6 181,282 - +0.1 181,287 - +0.7 181,296 + +2.5 181,297 - -0.3 181,298 + +0.6 181,298 + +0.1 181,299 - +0.4 181,315 - +0.8 181,329 - +0.1 181,344 + +1.7 181,345 - +0.2 181,345 - +1.2 181,346 + +1.0 181,346 + -0.1 181,346 + -1.8 181,347 - -0.8 181,414 + CA264_21565 0.12 -1.3 181,414 + CA264_21565 0.12 -0.6 181,414 + CA264_21565 0.12 -0.5 181,415 - CA264_21565 0.13 -0.0 181,418 - CA264_21565 0.13 +0.6 181,418 - CA264_21565 0.13 -1.6 181,484 + CA264_21565 0.32 +0.1 181,505 + CA264_21565 0.38 -0.5 181,506 - CA264_21565 0.38 +0.7 181,534 + CA264_21565 0.46 +0.0 181,534 + CA264_21565 0.46 +0.5 181,534 + CA264_21565 0.46 -0.8 181,534 + CA264_21565 0.46 +1.1 181,538 + CA264_21565 0.48 -0.1 181,539 - CA264_21565 0.48 +0.5 181,539 - CA264_21565 0.48 -1.8 181,543 + CA264_21565 0.49 -0.4 181,543 + CA264_21565 0.49 +1.9 181,543 + CA264_21565 0.49 +0.6 181,544 - CA264_21565 0.49 +0.1 181,588 + CA264_21565 0.62 -0.1 181,591 + CA264_21565 0.63 +0.4 181,777 - +0.4 181,787 + -0.1 181,788 - -0.1 181,808 - +1.9 181,818 + +1.0 181,819 - -0.3 181,821 + -0.6 181,841 + -0.2 181,841 + +1.2 181,842 - -0.1 181,842 - -1.0 181,846 - +0.8 181,846 - +0.2 181,846 - -0.3 181,865 + CA264_21570 0.13 -0.0 181,865 + CA264_21570 0.13 -0.2 181,866 - CA264_21570 0.13 +0.2 181,866 - CA264_21570 0.13 +0.9 181,870 + CA264_21570 0.14 +0.2 181,931 + CA264_21570 0.37 -0.4 181,931 + CA264_21570 0.37 +1.9 181,932 - CA264_21570 0.37 -0.1 182,004 + CA264_21570 0.64 -0.4 182,039 - CA264_21570 0.77 +0.1 182,105 - +1.1 182,139 + -0.3 182,144 - +2.8 182,147 + +1.9 182,148 - +1.1 182,163 + +0.4 182,164 - +0.6 182,189 + +0.1 182,192 - -0.1 182,248 - +0.8 182,394 + CA264_21575 0.15 +0.1 182,420 + CA264_21575 0.16 -1.0 182,420 + CA264_21575 0.16 -0.4 182,420 + CA264_21575 0.16 -2.0 182,421 - CA264_21575 0.16 +0.4 182,426 - CA264_21575 0.17 -1.9 182,432 + CA264_21575 0.17 -0.8 182,487 - CA264_21575 0.21 -1.0 182,487 - CA264_21575 0.21 +0.7 182,494 + CA264_21575 0.21 +1.5 182,495 - CA264_21575 0.21 -0.7 182,550 + CA264_21575 0.25 -0.2 182,608 + CA264_21575 0.29 -0.1 182,609 - CA264_21575 0.29 +0.8 182,660 + CA264_21575 0.32 -2.3 182,716 - CA264_21575 0.36 -0.7 182,788 + CA264_21575 0.40 +0.2 182,808 - CA264_21575 0.42 -0.1 182,833 + CA264_21575 0.43 -0.7 182,834 - CA264_21575 0.43 +1.0 182,858 + CA264_21575 0.45 -0.1 182,880 + CA264_21575 0.46 -1.0 182,964 + CA264_21575 0.52 +0.5 182,964 + CA264_21575 0.52 -0.5 182,965 - CA264_21575 0.52 -1.8 182,975 - +1.2 182,992 - CA264_21575 0.54 -0.3 183,074 + CA264_21575 0.59 -2.1 183,075 - CA264_21575 0.59 -1.3
Or see this region's nucleotide sequence