Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21360 and CA264_21365 are separated by 312 nucleotides CA264_21365 and CA264_21370 are separated by 330 nucleotides
CA264_21360: CA264_21360 - trehalase-like protein, at 135,866 to 137,182
_21360
CA264_21365: CA264_21365 - hypothetical protein, at 137,495 to 137,875
_21365
CA264_21370: CA264_21370 - hypothetical protein, at 138,206 to 139,042
_21370
Position (kb) 137
138 Strain fitness (log2 ratio) -2
-1
0
1
2 at 136.558 kb on + strand, within CA264_21360 at 136.565 kb on + strand, within CA264_21360 at 136.566 kb on - strand, within CA264_21360 at 136.631 kb on + strand, within CA264_21360 at 136.679 kb on + strand, within CA264_21360 at 136.680 kb on - strand, within CA264_21360 at 136.680 kb on - strand, within CA264_21360 at 136.703 kb on + strand, within CA264_21360 at 136.704 kb on - strand, within CA264_21360 at 136.704 kb on - strand, within CA264_21360 at 136.704 kb on - strand, within CA264_21360 at 136.710 kb on + strand, within CA264_21360 at 136.711 kb on - strand, within CA264_21360 at 136.768 kb on + strand, within CA264_21360 at 136.903 kb on + strand, within CA264_21360 at 136.907 kb on + strand, within CA264_21360 at 136.937 kb on + strand, within CA264_21360 at 136.938 kb on - strand, within CA264_21360 at 137.011 kb on + strand, within CA264_21360 at 137.011 kb on + strand, within CA264_21360 at 137.048 kb on + strand, within CA264_21360 at 137.048 kb on + strand, within CA264_21360 at 137.048 kb on + strand, within CA264_21360 at 137.049 kb on - strand, within CA264_21360 at 137.049 kb on - strand, within CA264_21360 at 137.049 kb on - strand, within CA264_21360 at 137.049 kb on - strand, within CA264_21360 at 137.049 kb on - strand, within CA264_21360 at 137.081 kb on + strand at 137.177 kb on - strand at 137.180 kb on + strand at 137.181 kb on - strand at 137.207 kb on - strand at 137.222 kb on + strand at 137.223 kb on - strand at 137.264 kb on + strand at 137.264 kb on + strand at 137.279 kb on + strand at 137.302 kb on + strand at 137.303 kb on - strand at 137.306 kb on + strand at 137.307 kb on - strand at 137.307 kb on - strand at 137.311 kb on + strand at 137.311 kb on + strand at 137.314 kb on + strand at 137.333 kb on - strand at 137.333 kb on - strand at 137.371 kb on + strand at 137.372 kb on - strand at 137.381 kb on + strand at 137.382 kb on - strand at 137.382 kb on - strand at 137.411 kb on + strand at 137.419 kb on + strand at 137.428 kb on + strand at 137.428 kb on + strand at 137.429 kb on - strand at 137.431 kb on - strand at 137.431 kb on - strand at 137.432 kb on + strand at 137.432 kb on + strand at 137.433 kb on - strand at 137.433 kb on - strand at 137.453 kb on + strand at 137.453 kb on + strand at 137.457 kb on + strand at 137.458 kb on - strand at 137.478 kb on + strand at 137.478 kb on + strand at 137.479 kb on - strand at 137.479 kb on - strand at 137.480 kb on + strand at 137.481 kb on - strand at 137.491 kb on + strand at 137.491 kb on + strand at 137.491 kb on + strand at 137.492 kb on - strand at 137.563 kb on - strand, within CA264_21365 at 137.563 kb on - strand, within CA264_21365 at 137.581 kb on - strand, within CA264_21365 at 137.594 kb on + strand, within CA264_21365 at 137.594 kb on + strand, within CA264_21365 at 137.595 kb on - strand, within CA264_21365 at 137.698 kb on + strand, within CA264_21365 at 137.741 kb on + strand, within CA264_21365 at 137.744 kb on - strand, within CA264_21365 at 137.744 kb on - strand, within CA264_21365 at 137.801 kb on - strand, within CA264_21365 at 137.801 kb on - strand, within CA264_21365 at 137.801 kb on - strand, within CA264_21365 at 137.866 kb on + strand at 137.866 kb on + strand at 137.867 kb on - strand at 137.886 kb on + strand at 137.887 kb on - strand at 137.887 kb on - strand at 137.901 kb on + strand at 137.902 kb on - strand at 137.908 kb on - strand at 137.915 kb on - strand at 137.932 kb on - strand at 137.932 kb on - strand at 137.958 kb on + strand at 137.983 kb on - strand at 137.983 kb on - strand at 138.055 kb on + strand at 138.055 kb on + strand at 138.057 kb on + strand at 138.132 kb on + strand at 138.133 kb on - strand at 138.200 kb on + strand at 138.201 kb on - strand at 138.201 kb on - strand at 138.201 kb on - strand at 138.220 kb on + strand at 138.237 kb on - strand at 138.268 kb on - strand at 138.273 kb on + strand at 138.281 kb on - strand at 138.281 kb on - strand at 138.311 kb on - strand, within CA264_21370 at 138.349 kb on + strand, within CA264_21370 at 138.350 kb on - strand, within CA264_21370 at 138.351 kb on + strand, within CA264_21370 at 138.355 kb on + strand, within CA264_21370 at 138.356 kb on - strand, within CA264_21370 at 138.396 kb on - strand, within CA264_21370 at 138.410 kb on + strand, within CA264_21370 at 138.410 kb on + strand, within CA264_21370 at 138.411 kb on - strand, within CA264_21370 at 138.411 kb on - strand, within CA264_21370 at 138.411 kb on - strand, within CA264_21370 at 138.411 kb on - strand, within CA264_21370 at 138.412 kb on + strand, within CA264_21370 at 138.505 kb on - strand, within CA264_21370 at 138.602 kb on + strand, within CA264_21370 at 138.604 kb on + strand, within CA264_21370 at 138.604 kb on + strand, within CA264_21370 at 138.607 kb on + strand, within CA264_21370 at 138.644 kb on + strand, within CA264_21370 at 138.698 kb on + strand, within CA264_21370 at 138.704 kb on - strand, within CA264_21370 at 138.716 kb on + strand, within CA264_21370 at 138.757 kb on - strand, within CA264_21370 at 138.815 kb on + strand, within CA264_21370 at 138.815 kb on + strand, within CA264_21370 at 138.816 kb on - strand, within CA264_21370
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 136,558 + CA264_21360 0.53 +0.8 136,565 + CA264_21360 0.53 -1.3 136,566 - CA264_21360 0.53 -0.1 136,631 + CA264_21360 0.58 +0.5 136,679 + CA264_21360 0.62 -0.1 136,680 - CA264_21360 0.62 -1.1 136,680 - CA264_21360 0.62 +0.3 136,703 + CA264_21360 0.64 -1.2 136,704 - CA264_21360 0.64 -1.5 136,704 - CA264_21360 0.64 -0.4 136,704 - CA264_21360 0.64 -0.0 136,710 + CA264_21360 0.64 -0.3 136,711 - CA264_21360 0.64 -0.2 136,768 + CA264_21360 0.68 -0.3 136,903 + CA264_21360 0.79 -0.2 136,907 + CA264_21360 0.79 +0.6 136,937 + CA264_21360 0.81 -0.3 136,938 - CA264_21360 0.81 -0.0 137,011 + CA264_21360 0.87 -0.7 137,011 + CA264_21360 0.87 +0.6 137,048 + CA264_21360 0.90 -0.1 137,048 + CA264_21360 0.90 -0.0 137,048 + CA264_21360 0.90 +0.9 137,049 - CA264_21360 0.90 -0.7 137,049 - CA264_21360 0.90 -0.6 137,049 - CA264_21360 0.90 -0.4 137,049 - CA264_21360 0.90 +0.4 137,049 - CA264_21360 0.90 -0.1 137,081 + +0.8 137,177 - -0.3 137,180 + -0.1 137,181 - -1.5 137,207 - -0.8 137,222 + -0.5 137,223 - +0.8 137,264 + -0.2 137,264 + +0.1 137,279 + -0.3 137,302 + -1.0 137,303 - +1.3 137,306 + +0.2 137,307 - -0.0 137,307 - -0.0 137,311 + -0.7 137,311 + -0.6 137,314 + +1.0 137,333 - -0.1 137,333 - -1.1 137,371 + +0.4 137,372 - +0.8 137,381 + -0.1 137,382 - -0.3 137,382 - -1.2 137,411 + -0.6 137,419 + +0.2 137,428 + -0.1 137,428 + -0.8 137,429 - -0.4 137,431 - -0.2 137,431 - +0.3 137,432 + +0.9 137,432 + +0.6 137,433 - -0.3 137,433 - +0.9 137,453 + +0.1 137,453 + -1.6 137,457 + -0.3 137,458 - -0.8 137,478 + -0.4 137,478 + +0.1 137,479 - +0.2 137,479 - +1.7 137,480 + +0.1 137,481 - -1.0 137,491 + +1.2 137,491 + +1.2 137,491 + -1.6 137,492 - +1.2 137,563 - CA264_21365 0.18 -0.3 137,563 - CA264_21365 0.18 -0.5 137,581 - CA264_21365 0.23 -0.0 137,594 + CA264_21365 0.26 +0.0 137,594 + CA264_21365 0.26 -0.4 137,595 - CA264_21365 0.26 -0.3 137,698 + CA264_21365 0.53 +0.5 137,741 + CA264_21365 0.65 -0.1 137,744 - CA264_21365 0.65 +0.7 137,744 - CA264_21365 0.65 +0.3 137,801 - CA264_21365 0.80 +1.2 137,801 - CA264_21365 0.80 -0.2 137,801 - CA264_21365 0.80 -0.2 137,866 + +1.6 137,866 + +0.7 137,867 - +0.3 137,886 + -0.1 137,887 - -0.1 137,887 - -0.2 137,901 + -0.2 137,902 - +0.3 137,908 - +0.1 137,915 - +0.6 137,932 - -0.4 137,932 - -2.1 137,958 + +0.7 137,983 - +0.2 137,983 - -0.6 138,055 + -1.0 138,055 + -0.5 138,057 + +0.5 138,132 + +1.2 138,133 - -0.3 138,200 + -0.1 138,201 - -0.3 138,201 - +0.4 138,201 - +0.3 138,220 + -0.3 138,237 - +0.1 138,268 - -0.3 138,273 + +0.4 138,281 - +0.6 138,281 - +0.3 138,311 - CA264_21370 0.13 +0.1 138,349 + CA264_21370 0.17 -0.2 138,350 - CA264_21370 0.17 -2.5 138,351 + CA264_21370 0.17 +1.1 138,355 + CA264_21370 0.18 +0.1 138,356 - CA264_21370 0.18 -1.8 138,396 - CA264_21370 0.23 +0.4 138,410 + CA264_21370 0.24 -1.1 138,410 + CA264_21370 0.24 -0.6 138,411 - CA264_21370 0.24 -0.9 138,411 - CA264_21370 0.24 +0.0 138,411 - CA264_21370 0.24 +2.2 138,411 - CA264_21370 0.24 +0.3 138,412 + CA264_21370 0.25 +1.0 138,505 - CA264_21370 0.36 +0.7 138,602 + CA264_21370 0.47 +0.2 138,604 + CA264_21370 0.48 -0.2 138,604 + CA264_21370 0.48 -0.6 138,607 + CA264_21370 0.48 +1.7 138,644 + CA264_21370 0.52 +0.2 138,698 + CA264_21370 0.59 -0.3 138,704 - CA264_21370 0.59 -0.2 138,716 + CA264_21370 0.61 +0.7 138,757 - CA264_21370 0.66 +0.2 138,815 + CA264_21370 0.73 +0.0 138,815 + CA264_21370 0.73 -0.5 138,816 - CA264_21370 0.73 +0.4
Or see this region's nucleotide sequence