Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18085 and CA264_18090 are separated by 385 nucleotides CA264_18090 and CA264_18095 are separated by 88 nucleotides CA264_18095 and CA264_18100 are separated by 60 nucleotides
CA264_18085: CA264_18085 - 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase, at 4,206,006 to 4,206,788
_18085
CA264_18090: CA264_18090 - DUF305 domain-containing protein, at 4,207,174 to 4,207,755
_18090
CA264_18095: CA264_18095 - hypothetical protein, at 4,207,844 to 4,208,419
_18095
CA264_18100: CA264_18100 - ABC-ATPase UvrA, at 4,208,480 to 4,211,395
_18100
Position (kb)
4207
4208 Strain fitness (log2 ratio)
-2
-1
0
1 at 4206.276 kb on - strand, within CA264_18085 at 4206.316 kb on + strand, within CA264_18085 at 4206.393 kb on - strand, within CA264_18085 at 4206.410 kb on - strand, within CA264_18085 at 4206.416 kb on - strand, within CA264_18085 at 4206.509 kb on - strand, within CA264_18085 at 4206.509 kb on - strand, within CA264_18085 at 4206.687 kb on + strand, within CA264_18085 at 4206.815 kb on + strand at 4206.861 kb on + strand at 4206.861 kb on + strand at 4206.883 kb on + strand at 4206.899 kb on - strand at 4206.899 kb on - strand at 4206.902 kb on + strand at 4206.903 kb on - strand at 4206.942 kb on + strand at 4206.943 kb on - strand at 4206.943 kb on - strand at 4206.980 kb on + strand at 4207.002 kb on - strand at 4207.127 kb on - strand at 4207.127 kb on - strand at 4207.162 kb on + strand at 4207.166 kb on - strand at 4207.167 kb on + strand at 4207.168 kb on - strand at 4207.302 kb on + strand, within CA264_18090 at 4207.303 kb on - strand, within CA264_18090 at 4207.303 kb on - strand, within CA264_18090 at 4207.320 kb on + strand, within CA264_18090 at 4207.321 kb on - strand, within CA264_18090 at 4207.415 kb on + strand, within CA264_18090 at 4207.415 kb on + strand, within CA264_18090 at 4207.582 kb on + strand, within CA264_18090 at 4207.583 kb on - strand, within CA264_18090 at 4207.649 kb on + strand, within CA264_18090 at 4207.650 kb on - strand, within CA264_18090 at 4207.650 kb on - strand, within CA264_18090 at 4207.753 kb on + strand at 4207.754 kb on - strand at 4207.754 kb on - strand at 4207.775 kb on + strand at 4207.776 kb on - strand at 4207.779 kb on + strand at 4207.784 kb on + strand at 4207.795 kb on + strand at 4207.796 kb on - strand at 4207.818 kb on + strand at 4207.881 kb on + strand at 4207.948 kb on - strand, within CA264_18095 at 4208.032 kb on - strand, within CA264_18095 at 4208.032 kb on - strand, within CA264_18095 at 4208.230 kb on + strand, within CA264_18095 at 4208.230 kb on + strand, within CA264_18095 at 4208.272 kb on - strand, within CA264_18095 at 4208.339 kb on + strand, within CA264_18095 at 4208.340 kb on - strand, within CA264_18095 at 4208.414 kb on - strand at 4208.511 kb on + strand at 4208.635 kb on + strand at 4208.647 kb on - strand at 4208.687 kb on - strand at 4208.690 kb on + strand at 4208.691 kb on - strand at 4208.711 kb on - strand at 4208.721 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 4,206,276 - CA264_18085 0.34 +0.8 4,206,316 + CA264_18085 0.40 -0.7 4,206,393 - CA264_18085 0.49 -1.0 4,206,410 - CA264_18085 0.52 +0.8 4,206,416 - CA264_18085 0.52 -0.1 4,206,509 - CA264_18085 0.64 -0.2 4,206,509 - CA264_18085 0.64 +0.4 4,206,687 + CA264_18085 0.87 +1.4 4,206,815 + +0.8 4,206,861 + -2.0 4,206,861 + -0.0 4,206,883 + +0.4 4,206,899 - -1.9 4,206,899 - -1.6 4,206,902 + -0.4 4,206,903 - +0.3 4,206,942 + -0.6 4,206,943 - -1.1 4,206,943 - +0.8 4,206,980 + -1.1 4,207,002 - -0.8 4,207,127 - +0.6 4,207,127 - +0.9 4,207,162 + -0.4 4,207,166 - -0.7 4,207,167 + -0.3 4,207,168 - -0.3 4,207,302 + CA264_18090 0.22 -0.4 4,207,303 - CA264_18090 0.22 +0.2 4,207,303 - CA264_18090 0.22 -0.3 4,207,320 + CA264_18090 0.25 +1.4 4,207,321 - CA264_18090 0.25 +1.3 4,207,415 + CA264_18090 0.41 -0.6 4,207,415 + CA264_18090 0.41 +0.1 4,207,582 + CA264_18090 0.70 -0.3 4,207,583 - CA264_18090 0.70 +0.4 4,207,649 + CA264_18090 0.82 -0.7 4,207,650 - CA264_18090 0.82 +0.4 4,207,650 - CA264_18090 0.82 +0.9 4,207,753 + +0.7 4,207,754 - +0.5 4,207,754 - +1.6 4,207,775 + +0.1 4,207,776 - -0.9 4,207,779 + -0.4 4,207,784 + -0.2 4,207,795 + +0.3 4,207,796 - +0.8 4,207,818 + -0.7 4,207,881 + -1.7 4,207,948 - CA264_18095 0.18 -0.3 4,208,032 - CA264_18095 0.33 +0.0 4,208,032 - CA264_18095 0.33 -1.3 4,208,230 + CA264_18095 0.67 +0.9 4,208,230 + CA264_18095 0.67 +0.8 4,208,272 - CA264_18095 0.74 +1.4 4,208,339 + CA264_18095 0.86 +1.0 4,208,340 - CA264_18095 0.86 -0.6 4,208,414 - -0.4 4,208,511 + +0.6 4,208,635 + -1.8 4,208,647 - -2.0 4,208,687 - -1.8 4,208,690 + -0.6 4,208,691 - -0.7 4,208,711 - -0.7 4,208,721 - -0.1
Or see this region's nucleotide sequence