Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16255 and CA264_16260 are separated by 166 nucleotides CA264_16260 and CA264_16265 are separated by 96 nucleotides
CA264_16255: CA264_16255 - hypothetical protein, at 3,781,413 to 3,782,366
_16255
CA264_16260: CA264_16260 - transcriptional regulator AsnC, at 3,782,533 to 3,782,991
_16260
CA264_16265: CA264_16265 - aminotransferase, at 3,783,088 to 3,784,329
_16265
Position (kb)
3782
3783 Strain fitness (log2 ratio)
-2
-1
0
1 at 3781.678 kb on - strand, within CA264_16255 at 3781.684 kb on + strand, within CA264_16255 at 3782.267 kb on + strand, within CA264_16255 at 3782.417 kb on - strand at 3782.522 kb on + strand at 3782.602 kb on + strand, within CA264_16260 at 3782.612 kb on + strand, within CA264_16260 at 3782.613 kb on - strand, within CA264_16260 at 3782.684 kb on + strand, within CA264_16260 at 3782.774 kb on - strand, within CA264_16260 at 3782.805 kb on - strand, within CA264_16260 at 3782.842 kb on + strand, within CA264_16260 at 3782.898 kb on - strand, within CA264_16260 at 3782.898 kb on - strand, within CA264_16260 at 3782.898 kb on - strand, within CA264_16260 at 3782.989 kb on + strand at 3783.036 kb on + strand at 3783.037 kb on - strand at 3783.045 kb on + strand at 3783.045 kb on + strand at 3783.048 kb on - strand at 3783.246 kb on - strand, within CA264_16265 at 3783.327 kb on - strand, within CA264_16265 at 3783.395 kb on + strand, within CA264_16265 at 3783.396 kb on - strand, within CA264_16265 at 3783.531 kb on + strand, within CA264_16265 at 3783.531 kb on + strand, within CA264_16265 at 3783.532 kb on - strand, within CA264_16265 at 3783.532 kb on - strand, within CA264_16265 at 3783.544 kb on - strand, within CA264_16265 at 3783.544 kb on - strand, within CA264_16265 at 3783.572 kb on + strand, within CA264_16265 at 3783.577 kb on + strand, within CA264_16265 at 3783.578 kb on - strand, within CA264_16265 at 3783.578 kb on - strand, within CA264_16265 at 3783.578 kb on - strand, within CA264_16265 at 3783.607 kb on - strand, within CA264_16265 at 3783.607 kb on - strand, within CA264_16265 at 3783.619 kb on + strand, within CA264_16265 at 3783.619 kb on + strand, within CA264_16265 at 3783.619 kb on + strand, within CA264_16265 at 3783.619 kb on + strand, within CA264_16265 at 3783.619 kb on + strand, within CA264_16265 at 3783.620 kb on - strand, within CA264_16265 at 3783.621 kb on + strand, within CA264_16265 at 3783.621 kb on + strand, within CA264_16265 at 3783.621 kb on + strand, within CA264_16265 at 3783.623 kb on + strand, within CA264_16265 at 3783.623 kb on + strand, within CA264_16265 at 3783.624 kb on - strand, within CA264_16265 at 3783.630 kb on + strand, within CA264_16265 at 3783.631 kb on - strand, within CA264_16265 at 3783.631 kb on - strand, within CA264_16265 at 3783.632 kb on + strand, within CA264_16265 at 3783.632 kb on + strand, within CA264_16265 at 3783.713 kb on + strand, within CA264_16265 at 3783.714 kb on - strand, within CA264_16265 at 3783.723 kb on - strand, within CA264_16265
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 3,781,678 - CA264_16255 0.28 -1.0 3,781,684 + CA264_16255 0.28 -0.1 3,782,267 + CA264_16255 0.90 -0.3 3,782,417 - +0.5 3,782,522 + +0.2 3,782,602 + CA264_16260 0.15 -0.6 3,782,612 + CA264_16260 0.17 -1.4 3,782,613 - CA264_16260 0.17 -0.1 3,782,684 + CA264_16260 0.33 -1.4 3,782,774 - CA264_16260 0.53 +0.1 3,782,805 - CA264_16260 0.59 +1.6 3,782,842 + CA264_16260 0.67 +0.1 3,782,898 - CA264_16260 0.80 +0.3 3,782,898 - CA264_16260 0.80 -0.3 3,782,898 - CA264_16260 0.80 -1.9 3,782,989 + +0.0 3,783,036 + +0.4 3,783,037 - +1.1 3,783,045 + -1.3 3,783,045 + +1.4 3,783,048 - +0.9 3,783,246 - CA264_16265 0.13 -1.4 3,783,327 - CA264_16265 0.19 +0.3 3,783,395 + CA264_16265 0.25 -0.6 3,783,396 - CA264_16265 0.25 -0.2 3,783,531 + CA264_16265 0.36 -0.8 3,783,531 + CA264_16265 0.36 +0.3 3,783,532 - CA264_16265 0.36 -0.5 3,783,532 - CA264_16265 0.36 -2.1 3,783,544 - CA264_16265 0.37 -0.6 3,783,544 - CA264_16265 0.37 -1.3 3,783,572 + CA264_16265 0.39 +0.7 3,783,577 + CA264_16265 0.39 +0.0 3,783,578 - CA264_16265 0.39 +0.8 3,783,578 - CA264_16265 0.39 +1.1 3,783,578 - CA264_16265 0.39 -0.6 3,783,607 - CA264_16265 0.42 +0.5 3,783,607 - CA264_16265 0.42 +1.6 3,783,619 + CA264_16265 0.43 +0.0 3,783,619 + CA264_16265 0.43 +1.6 3,783,619 + CA264_16265 0.43 -0.5 3,783,619 + CA264_16265 0.43 -0.2 3,783,619 + CA264_16265 0.43 +0.0 3,783,620 - CA264_16265 0.43 -0.4 3,783,621 + CA264_16265 0.43 -1.0 3,783,621 + CA264_16265 0.43 -1.0 3,783,621 + CA264_16265 0.43 -2.4 3,783,623 + CA264_16265 0.43 -1.1 3,783,623 + CA264_16265 0.43 -1.7 3,783,624 - CA264_16265 0.43 -0.0 3,783,630 + CA264_16265 0.44 -0.4 3,783,631 - CA264_16265 0.44 +0.4 3,783,631 - CA264_16265 0.44 -0.7 3,783,632 + CA264_16265 0.44 -0.0 3,783,632 + CA264_16265 0.44 +1.2 3,783,713 + CA264_16265 0.50 +0.7 3,783,714 - CA264_16265 0.50 +0.7 3,783,723 - CA264_16265 0.51 +0.0
Or see this region's nucleotide sequence