Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14540 and CA264_14545 are separated by 0 nucleotides CA264_14545 and CA264_14550 are separated by 72 nucleotides
CA264_14540: CA264_14540 - NADP-dependent malic enzyme, at 3,411,501 to 3,413,771
_14540
CA264_14545: CA264_14545 - Holliday junction branch migration protein RuvA, at 3,413,772 to 3,414,362
_14545
CA264_14550: CA264_14550 - cell surface protein SprA, at 3,414,435 to 3,421,562
_14550
Position (kb)
3413
3414
3415 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3412.848 kb on + strand, within CA264_14540 at 3412.856 kb on - strand, within CA264_14540 at 3413.105 kb on + strand, within CA264_14540 at 3413.195 kb on - strand, within CA264_14540 at 3413.195 kb on - strand, within CA264_14540 at 3413.233 kb on - strand, within CA264_14540 at 3413.259 kb on + strand, within CA264_14540 at 3413.260 kb on - strand, within CA264_14540 at 3413.281 kb on + strand, within CA264_14540 at 3413.382 kb on + strand, within CA264_14540 at 3413.674 kb on + strand at 3413.752 kb on - strand at 3413.756 kb on + strand at 3413.757 kb on - strand at 3413.765 kb on + strand at 3413.765 kb on + strand at 3413.769 kb on + strand at 3414.367 kb on + strand at 3414.367 kb on + strand at 3414.367 kb on + strand at 3414.368 kb on - strand at 3414.368 kb on - strand at 3414.369 kb on + strand at 3414.370 kb on - strand at 3414.428 kb on + strand at 3414.428 kb on + strand at 3414.517 kb on + strand at 3414.517 kb on + strand at 3414.518 kb on - strand at 3414.518 kb on - strand at 3414.549 kb on + strand at 3414.549 kb on + strand at 3414.549 kb on + strand at 3414.550 kb on - strand at 3414.550 kb on - strand at 3414.550 kb on - strand at 3414.551 kb on + strand at 3414.637 kb on + strand at 3414.661 kb on + strand at 3414.661 kb on + strand at 3414.662 kb on - strand at 3414.696 kb on - strand at 3414.724 kb on + strand at 3414.724 kb on + strand at 3414.747 kb on - strand at 3414.910 kb on - strand at 3414.910 kb on - strand at 3414.913 kb on + strand at 3414.913 kb on + strand at 3414.992 kb on + strand at 3415.052 kb on + strand at 3415.082 kb on + strand at 3415.134 kb on + strand at 3415.135 kb on - strand at 3415.157 kb on + strand, within CA264_14550 at 3415.157 kb on + strand, within CA264_14550 at 3415.157 kb on + strand, within CA264_14550 at 3415.159 kb on + strand, within CA264_14550 at 3415.159 kb on + strand, within CA264_14550 at 3415.159 kb on + strand, within CA264_14550 at 3415.184 kb on - strand, within CA264_14550 at 3415.237 kb on + strand, within CA264_14550
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 3,412,848 + CA264_14540 0.59 -2.1 3,412,856 - CA264_14540 0.60 -2.7 3,413,105 + CA264_14540 0.71 -1.1 3,413,195 - CA264_14540 0.75 -0.7 3,413,195 - CA264_14540 0.75 -0.4 3,413,233 - CA264_14540 0.76 -1.9 3,413,259 + CA264_14540 0.77 -0.4 3,413,260 - CA264_14540 0.77 -2.9 3,413,281 + CA264_14540 0.78 -0.7 3,413,382 + CA264_14540 0.83 -1.0 3,413,674 + -2.4 3,413,752 - -2.9 3,413,756 + -1.6 3,413,757 - +0.0 3,413,765 + -1.5 3,413,765 + -1.4 3,413,769 + -2.3 3,414,367 + +0.8 3,414,367 + -0.7 3,414,367 + +0.2 3,414,368 - -3.7 3,414,368 - -4.6 3,414,369 + +0.6 3,414,370 - -0.9 3,414,428 + -0.2 3,414,428 + -0.4 3,414,517 + +0.4 3,414,517 + -0.4 3,414,518 - -0.5 3,414,518 - -0.7 3,414,549 + +1.6 3,414,549 + -0.7 3,414,549 + +0.7 3,414,550 - +0.0 3,414,550 - -0.9 3,414,550 - -2.0 3,414,551 + +0.8 3,414,637 + +0.4 3,414,661 + +0.0 3,414,661 + +0.6 3,414,662 - -0.5 3,414,696 - -0.6 3,414,724 + -0.6 3,414,724 + +0.2 3,414,747 - -1.2 3,414,910 - +0.1 3,414,910 - -0.1 3,414,913 + +1.4 3,414,913 + -0.2 3,414,992 + +0.2 3,415,052 + -2.4 3,415,082 + +0.3 3,415,134 + +0.1 3,415,135 - +1.1 3,415,157 + CA264_14550 0.10 +0.8 3,415,157 + CA264_14550 0.10 -0.7 3,415,157 + CA264_14550 0.10 -1.5 3,415,159 + CA264_14550 0.10 +1.9 3,415,159 + CA264_14550 0.10 +0.2 3,415,159 + CA264_14550 0.10 -0.1 3,415,184 - CA264_14550 0.11 -0.2 3,415,237 + CA264_14550 0.11 -0.4
Or see this region's nucleotide sequence