Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13735 and CA264_13740 are separated by 11 nucleotides CA264_13740 and CA264_13745 are separated by 266 nucleotides CA264_13745 and CA264_13750 are separated by 159 nucleotides
CA264_13735: CA264_13735 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 3,209,293 to 3,210,186
_13735
CA264_13740: CA264_13740 - cytidylate kinase, at 3,210,198 to 3,210,902
_13740
CA264_13745: CA264_13745 - adenine deaminase, at 3,211,169 to 3,212,803
_13745
CA264_13750: CA264_13750 - response regulator, at 3,212,963 to 3,213,406
_13750
Position (kb)
3211
3212
3213 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3210.178 kb on + strand at 3210.925 kb on + strand at 3210.925 kb on + strand at 3210.982 kb on - strand at 3211.074 kb on - strand at 3211.106 kb on + strand at 3211.114 kb on - strand at 3211.150 kb on - strand at 3211.169 kb on - strand at 3211.169 kb on - strand at 3211.209 kb on + strand at 3211.209 kb on + strand at 3211.213 kb on + strand at 3211.213 kb on + strand at 3211.213 kb on + strand at 3211.214 kb on - strand at 3211.214 kb on - strand at 3211.298 kb on + strand at 3211.329 kb on + strand at 3211.329 kb on + strand at 3211.329 kb on + strand at 3211.440 kb on + strand, within CA264_13745 at 3211.440 kb on + strand, within CA264_13745 at 3211.441 kb on - strand, within CA264_13745 at 3211.454 kb on + strand, within CA264_13745 at 3211.454 kb on + strand, within CA264_13745 at 3211.454 kb on + strand, within CA264_13745 at 3211.455 kb on - strand, within CA264_13745 at 3211.455 kb on - strand, within CA264_13745 at 3211.598 kb on + strand, within CA264_13745 at 3211.680 kb on - strand, within CA264_13745 at 3212.030 kb on + strand, within CA264_13745 at 3212.030 kb on + strand, within CA264_13745 at 3212.030 kb on + strand, within CA264_13745 at 3212.030 kb on + strand, within CA264_13745 at 3212.031 kb on - strand, within CA264_13745 at 3212.031 kb on - strand, within CA264_13745 at 3212.078 kb on - strand, within CA264_13745 at 3212.079 kb on + strand, within CA264_13745 at 3212.079 kb on + strand, within CA264_13745 at 3212.080 kb on - strand, within CA264_13745 at 3212.080 kb on - strand, within CA264_13745 at 3212.080 kb on - strand, within CA264_13745 at 3212.084 kb on - strand, within CA264_13745 at 3212.084 kb on - strand, within CA264_13745 at 3212.085 kb on + strand, within CA264_13745 at 3212.085 kb on + strand, within CA264_13745 at 3212.085 kb on + strand, within CA264_13745 at 3212.086 kb on - strand, within CA264_13745 at 3212.198 kb on - strand, within CA264_13745 at 3212.257 kb on - strand, within CA264_13745 at 3212.476 kb on + strand, within CA264_13745 at 3212.476 kb on + strand, within CA264_13745 at 3212.477 kb on - strand, within CA264_13745 at 3212.479 kb on + strand, within CA264_13745 at 3212.480 kb on - strand, within CA264_13745 at 3212.551 kb on - strand, within CA264_13745 at 3212.624 kb on + strand, within CA264_13745 at 3212.901 kb on - strand at 3212.955 kb on + strand at 3212.958 kb on - strand at 3213.046 kb on + strand, within CA264_13750 at 3213.047 kb on - strand, within CA264_13750 at 3213.060 kb on + strand, within CA264_13750 at 3213.060 kb on + strand, within CA264_13750 at 3213.103 kb on + strand, within CA264_13750 at 3213.104 kb on - strand, within CA264_13750 at 3213.104 kb on - strand, within CA264_13750 at 3213.122 kb on - strand, within CA264_13750 at 3213.122 kb on - strand, within CA264_13750 at 3213.153 kb on + strand, within CA264_13750 at 3213.221 kb on - strand, within CA264_13750 at 3213.233 kb on - strand, within CA264_13750 at 3213.260 kb on - strand, within CA264_13750 at 3213.265 kb on + strand, within CA264_13750 at 3213.267 kb on + strand, within CA264_13750 at 3213.268 kb on - strand, within CA264_13750 at 3213.269 kb on + strand, within CA264_13750 at 3213.269 kb on + strand, within CA264_13750 at 3213.269 kb on + strand, within CA264_13750 at 3213.270 kb on - strand, within CA264_13750 at 3213.270 kb on - strand, within CA264_13750 at 3213.289 kb on + strand, within CA264_13750 at 3213.364 kb on + strand at 3213.364 kb on + strand at 3213.365 kb on - strand at 3213.407 kb on - strand at 3213.424 kb on + strand at 3213.425 kb on - strand at 3213.446 kb on - strand at 3213.598 kb on - strand at 3213.616 kb on - strand at 3213.646 kb on - strand at 3213.695 kb on + strand at 3213.695 kb on + strand at 3213.696 kb on - strand at 3213.697 kb on + strand at 3213.698 kb on - strand at 3213.705 kb on + strand at 3213.705 kb on + strand at 3213.706 kb on - strand at 3213.706 kb on - strand at 3213.732 kb on - strand at 3213.741 kb on + strand at 3213.741 kb on + strand at 3213.797 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 3,210,178 + -1.6 3,210,925 + +1.0 3,210,925 + -0.9 3,210,982 - -0.0 3,211,074 - +0.9 3,211,106 + -1.2 3,211,114 - -0.1 3,211,150 - -0.4 3,211,169 - -1.0 3,211,169 - -0.1 3,211,209 + -1.1 3,211,209 + -0.1 3,211,213 + -0.1 3,211,213 + -0.8 3,211,213 + -1.1 3,211,214 - +0.4 3,211,214 - +0.4 3,211,298 + +0.7 3,211,329 + +0.6 3,211,329 + -0.6 3,211,329 + -0.3 3,211,440 + CA264_13745 0.17 -0.5 3,211,440 + CA264_13745 0.17 +0.7 3,211,441 - CA264_13745 0.17 -0.3 3,211,454 + CA264_13745 0.17 -1.3 3,211,454 + CA264_13745 0.17 +0.1 3,211,454 + CA264_13745 0.17 -0.6 3,211,455 - CA264_13745 0.17 +0.2 3,211,455 - CA264_13745 0.17 +0.4 3,211,598 + CA264_13745 0.26 -0.7 3,211,680 - CA264_13745 0.31 -1.3 3,212,030 + CA264_13745 0.53 +0.1 3,212,030 + CA264_13745 0.53 +0.0 3,212,030 + CA264_13745 0.53 +1.3 3,212,030 + CA264_13745 0.53 +0.7 3,212,031 - CA264_13745 0.53 +0.7 3,212,031 - CA264_13745 0.53 -0.0 3,212,078 - CA264_13745 0.56 +1.0 3,212,079 + CA264_13745 0.56 +1.2 3,212,079 + CA264_13745 0.56 -1.1 3,212,080 - CA264_13745 0.56 -0.2 3,212,080 - CA264_13745 0.56 -0.6 3,212,080 - CA264_13745 0.56 -0.9 3,212,084 - CA264_13745 0.56 +0.1 3,212,084 - CA264_13745 0.56 +0.5 3,212,085 + CA264_13745 0.56 -1.5 3,212,085 + CA264_13745 0.56 +0.4 3,212,085 + CA264_13745 0.56 -1.8 3,212,086 - CA264_13745 0.56 -0.4 3,212,198 - CA264_13745 0.63 +0.1 3,212,257 - CA264_13745 0.67 +0.5 3,212,476 + CA264_13745 0.80 +0.0 3,212,476 + CA264_13745 0.80 -0.4 3,212,477 - CA264_13745 0.80 -0.6 3,212,479 + CA264_13745 0.80 -0.3 3,212,480 - CA264_13745 0.80 +0.3 3,212,551 - CA264_13745 0.85 -2.2 3,212,624 + CA264_13745 0.89 -1.6 3,212,901 - +0.1 3,212,955 + +0.4 3,212,958 - -0.2 3,213,046 + CA264_13750 0.19 +0.6 3,213,047 - CA264_13750 0.19 -0.7 3,213,060 + CA264_13750 0.22 -0.4 3,213,060 + CA264_13750 0.22 +0.7 3,213,103 + CA264_13750 0.32 -0.1 3,213,104 - CA264_13750 0.32 -1.1 3,213,104 - CA264_13750 0.32 -0.8 3,213,122 - CA264_13750 0.36 +1.3 3,213,122 - CA264_13750 0.36 +0.1 3,213,153 + CA264_13750 0.43 +0.6 3,213,221 - CA264_13750 0.58 -0.2 3,213,233 - CA264_13750 0.61 +0.8 3,213,260 - CA264_13750 0.67 -0.7 3,213,265 + CA264_13750 0.68 -0.5 3,213,267 + CA264_13750 0.68 +0.6 3,213,268 - CA264_13750 0.69 -1.0 3,213,269 + CA264_13750 0.69 -0.3 3,213,269 + CA264_13750 0.69 +0.9 3,213,269 + CA264_13750 0.69 +0.9 3,213,270 - CA264_13750 0.69 +0.0 3,213,270 - CA264_13750 0.69 -0.3 3,213,289 + CA264_13750 0.73 +0.0 3,213,364 + +0.3 3,213,364 + +0.1 3,213,365 - -0.7 3,213,407 - -0.4 3,213,424 + +0.0 3,213,425 - +0.3 3,213,446 - +0.7 3,213,598 - +0.3 3,213,616 - +0.6 3,213,646 - +0.4 3,213,695 + +0.1 3,213,695 + +0.2 3,213,696 - +0.6 3,213,697 + +1.0 3,213,698 - +0.0 3,213,705 + -0.1 3,213,705 + +1.9 3,213,706 - +0.2 3,213,706 - +0.1 3,213,732 - -0.0 3,213,741 + +0.9 3,213,741 + -0.1 3,213,797 + +0.2
Or see this region's nucleotide sequence