Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12155 and CA264_12160 are separated by 315 nucleotides CA264_12160 and CA264_12165 overlap by 17 nucleotides CA264_12165 and CA264_12170 are separated by 97 nucleotides
CA264_12155: CA264_12155 - histidine phosphatase family protein, at 2,835,141 to 2,835,725
_12155
CA264_12160: CA264_12160 - transcriptional regulator, at 2,836,041 to 2,836,439
_12160
CA264_12165: CA264_12165 - hypothetical protein, at 2,836,423 to 2,837,733
_12165
CA264_12170: CA264_12170 - hypothetical protein, at 2,837,831 to 2,838,925
_12170
CA264_12175: CA264_12175 - hypothetical protein, at 2,838,565 to 2,839,107
_12175
Position (kb)
2836
2837
2838 Strain fitness (log2 ratio)
-2
-1
0
1 at 2836.020 kb on + strand at 2836.149 kb on + strand, within CA264_12160 at 2836.230 kb on + strand, within CA264_12160 at 2836.433 kb on + strand at 2836.434 kb on - strand at 2836.441 kb on + strand at 2836.442 kb on - strand at 2836.442 kb on - strand at 2836.534 kb on + strand at 2836.592 kb on + strand, within CA264_12165 at 2836.837 kb on + strand, within CA264_12165 at 2836.837 kb on + strand, within CA264_12165 at 2836.881 kb on + strand, within CA264_12165 at 2837.115 kb on + strand, within CA264_12165 at 2837.116 kb on - strand, within CA264_12165 at 2837.145 kb on + strand, within CA264_12165 at 2837.145 kb on + strand, within CA264_12165 at 2837.146 kb on - strand, within CA264_12165 at 2837.146 kb on - strand, within CA264_12165 at 2837.175 kb on + strand, within CA264_12165 at 2837.194 kb on - strand, within CA264_12165 at 2837.240 kb on + strand, within CA264_12165 at 2837.339 kb on + strand, within CA264_12165 at 2837.423 kb on - strand, within CA264_12165 at 2837.423 kb on - strand, within CA264_12165 at 2837.424 kb on + strand, within CA264_12165 at 2837.425 kb on - strand, within CA264_12165 at 2837.428 kb on + strand, within CA264_12165 at 2837.529 kb on - strand, within CA264_12165 at 2837.614 kb on - strand at 2837.616 kb on - strand at 2837.628 kb on + strand at 2837.701 kb on + strand at 2837.732 kb on - strand at 2837.734 kb on + strand at 2837.783 kb on + strand at 2837.794 kb on + strand at 2837.794 kb on + strand at 2837.936 kb on + strand at 2837.936 kb on + strand at 2837.942 kb on + strand, within CA264_12170 at 2837.943 kb on - strand, within CA264_12170 at 2837.943 kb on - strand, within CA264_12170 at 2837.943 kb on - strand, within CA264_12170 at 2837.943 kb on - strand, within CA264_12170 at 2838.414 kb on + strand, within CA264_12170 at 2838.414 kb on + strand, within CA264_12170 at 2838.436 kb on - strand, within CA264_12170 at 2838.471 kb on - strand, within CA264_12170 at 2838.472 kb on + strand, within CA264_12170 at 2838.473 kb on - strand, within CA264_12170
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 2,836,020 + -1.0 2,836,149 + CA264_12160 0.27 -0.4 2,836,230 + CA264_12160 0.47 -0.2 2,836,433 + +0.3 2,836,434 - -0.4 2,836,441 + -0.0 2,836,442 - -0.6 2,836,442 - -1.5 2,836,534 + -0.1 2,836,592 + CA264_12165 0.13 -0.1 2,836,837 + CA264_12165 0.32 -1.8 2,836,837 + CA264_12165 0.32 -0.4 2,836,881 + CA264_12165 0.35 -0.3 2,837,115 + CA264_12165 0.53 +0.2 2,837,116 - CA264_12165 0.53 -1.9 2,837,145 + CA264_12165 0.55 +0.6 2,837,145 + CA264_12165 0.55 -0.9 2,837,146 - CA264_12165 0.55 -0.8 2,837,146 - CA264_12165 0.55 +0.5 2,837,175 + CA264_12165 0.57 -1.4 2,837,194 - CA264_12165 0.59 -0.9 2,837,240 + CA264_12165 0.62 -0.9 2,837,339 + CA264_12165 0.70 -0.6 2,837,423 - CA264_12165 0.76 +0.9 2,837,423 - CA264_12165 0.76 -0.1 2,837,424 + CA264_12165 0.76 -2.0 2,837,425 - CA264_12165 0.76 -1.9 2,837,428 + CA264_12165 0.77 -1.1 2,837,529 - CA264_12165 0.84 -0.2 2,837,614 - -0.3 2,837,616 - +0.1 2,837,628 + +0.5 2,837,701 + +1.3 2,837,732 - -0.6 2,837,734 + +0.9 2,837,783 + +0.6 2,837,794 + -1.0 2,837,794 + +1.5 2,837,936 + -0.2 2,837,936 + +0.6 2,837,942 + CA264_12170 0.10 -0.1 2,837,943 - CA264_12170 0.10 +0.2 2,837,943 - CA264_12170 0.10 -0.2 2,837,943 - CA264_12170 0.10 +0.0 2,837,943 - CA264_12170 0.10 -0.3 2,838,414 + CA264_12170 0.53 +0.8 2,838,414 + CA264_12170 0.53 -0.6 2,838,436 - CA264_12170 0.55 -0.1 2,838,471 - CA264_12170 0.58 -0.9 2,838,472 + CA264_12170 0.59 +0.6 2,838,473 - CA264_12170 0.59 +0.4
Or see this region's nucleotide sequence