Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06190 and CA264_06195 are separated by 163 nucleotides CA264_06195 and CA264_06200 are separated by 589 nucleotides CA264_06200 and CA264_06205 overlap by 7 nucleotides
CA264_06190: CA264_06190 - molecular chaperone DnaJ, at 1,441,650 to 1,442,606
_06190
CA264_06195: CA264_06195 - YqaE/Pmp3 family membrane protein, at 1,442,770 to 1,442,952
_06195
CA264_06200: CA264_06200 - N-formylglutamate amidohydrolase, at 1,443,542 to 1,444,270
_06200
CA264_06205: CA264_06205 - glutamate--cysteine ligase, at 1,444,264 to 1,445,511
_06205
Position (kb)
1443
1444
1445 Strain fitness (log2 ratio)
-2
-1
0
1 at 1442.600 kb on - strand at 1442.663 kb on - strand at 1442.703 kb on + strand at 1442.765 kb on - strand at 1442.794 kb on + strand, within CA264_06195 at 1442.914 kb on + strand, within CA264_06195 at 1442.915 kb on - strand, within CA264_06195 at 1442.923 kb on + strand, within CA264_06195 at 1443.100 kb on + strand at 1443.100 kb on + strand at 1443.101 kb on - strand at 1443.276 kb on + strand at 1443.318 kb on - strand at 1443.365 kb on - strand at 1443.400 kb on - strand at 1443.404 kb on + strand at 1443.404 kb on + strand at 1443.404 kb on + strand at 1443.405 kb on - strand at 1443.405 kb on - strand at 1443.415 kb on - strand at 1443.430 kb on - strand at 1443.438 kb on - strand at 1443.502 kb on + strand at 1443.503 kb on - strand at 1443.503 kb on - strand at 1443.507 kb on + strand at 1443.688 kb on - strand, within CA264_06200 at 1443.717 kb on + strand, within CA264_06200 at 1443.748 kb on - strand, within CA264_06200 at 1443.759 kb on + strand, within CA264_06200 at 1443.857 kb on + strand, within CA264_06200 at 1443.857 kb on + strand, within CA264_06200 at 1443.857 kb on + strand, within CA264_06200 at 1443.858 kb on - strand, within CA264_06200 at 1443.858 kb on - strand, within CA264_06200 at 1443.901 kb on + strand, within CA264_06200 at 1443.902 kb on - strand, within CA264_06200 at 1443.950 kb on + strand, within CA264_06200 at 1443.950 kb on + strand, within CA264_06200 at 1443.950 kb on + strand, within CA264_06200 at 1443.950 kb on + strand, within CA264_06200 at 1443.962 kb on + strand, within CA264_06200 at 1443.963 kb on - strand, within CA264_06200 at 1443.981 kb on - strand, within CA264_06200 at 1443.981 kb on - strand, within CA264_06200 at 1443.984 kb on + strand, within CA264_06200 at 1443.984 kb on + strand, within CA264_06200 at 1443.984 kb on + strand, within CA264_06200 at 1443.984 kb on + strand, within CA264_06200 at 1443.985 kb on - strand, within CA264_06200 at 1443.985 kb on - strand, within CA264_06200 at 1443.988 kb on - strand, within CA264_06200 at 1444.184 kb on + strand, within CA264_06200 at 1444.185 kb on - strand, within CA264_06200 at 1444.185 kb on - strand, within CA264_06200 at 1444.185 kb on - strand, within CA264_06200 at 1444.185 kb on - strand, within CA264_06200 at 1444.215 kb on + strand at 1444.253 kb on + strand at 1444.253 kb on + strand at 1444.253 kb on + strand at 1444.257 kb on - strand at 1444.265 kb on + strand at 1444.265 kb on + strand at 1444.265 kb on + strand at 1444.266 kb on - strand at 1444.276 kb on - strand at 1444.327 kb on + strand at 1444.328 kb on - strand at 1444.470 kb on - strand, within CA264_06205 at 1444.528 kb on - strand, within CA264_06205 at 1444.567 kb on + strand, within CA264_06205 at 1444.583 kb on - strand, within CA264_06205 at 1444.866 kb on + strand, within CA264_06205 at 1445.060 kb on + strand, within CA264_06205 at 1445.061 kb on - strand, within CA264_06205 at 1445.061 kb on - strand, within CA264_06205 at 1445.141 kb on + strand, within CA264_06205 at 1445.250 kb on + strand, within CA264_06205
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 1,442,600 - -0.1 1,442,663 - +0.3 1,442,703 + -0.5 1,442,765 - -0.4 1,442,794 + CA264_06195 0.13 -0.7 1,442,914 + CA264_06195 0.79 -0.4 1,442,915 - CA264_06195 0.79 -2.1 1,442,923 + CA264_06195 0.84 -0.2 1,443,100 + -0.5 1,443,100 + +1.0 1,443,101 - +0.2 1,443,276 + -0.5 1,443,318 - -0.6 1,443,365 - -0.6 1,443,400 - -0.5 1,443,404 + +1.5 1,443,404 + -1.1 1,443,404 + -0.7 1,443,405 - -0.3 1,443,405 - -0.7 1,443,415 - -1.5 1,443,430 - -0.2 1,443,438 - -1.3 1,443,502 + -1.0 1,443,503 - -0.4 1,443,503 - +0.9 1,443,507 + +1.1 1,443,688 - CA264_06200 0.20 +0.1 1,443,717 + CA264_06200 0.24 -0.1 1,443,748 - CA264_06200 0.28 -1.8 1,443,759 + CA264_06200 0.30 +0.9 1,443,857 + CA264_06200 0.43 -0.1 1,443,857 + CA264_06200 0.43 +1.0 1,443,857 + CA264_06200 0.43 +1.1 1,443,858 - CA264_06200 0.43 -0.2 1,443,858 - CA264_06200 0.43 -0.1 1,443,901 + CA264_06200 0.49 -0.3 1,443,902 - CA264_06200 0.49 -0.7 1,443,950 + CA264_06200 0.56 -0.3 1,443,950 + CA264_06200 0.56 +0.8 1,443,950 + CA264_06200 0.56 +0.5 1,443,950 + CA264_06200 0.56 -0.1 1,443,962 + CA264_06200 0.58 -1.4 1,443,963 - CA264_06200 0.58 -1.5 1,443,981 - CA264_06200 0.60 -1.0 1,443,981 - CA264_06200 0.60 -0.1 1,443,984 + CA264_06200 0.61 -2.3 1,443,984 + CA264_06200 0.61 -0.2 1,443,984 + CA264_06200 0.61 +0.3 1,443,984 + CA264_06200 0.61 +0.3 1,443,985 - CA264_06200 0.61 -0.1 1,443,985 - CA264_06200 0.61 +0.3 1,443,988 - CA264_06200 0.61 -0.3 1,444,184 + CA264_06200 0.88 -0.2 1,444,185 - CA264_06200 0.88 +0.8 1,444,185 - CA264_06200 0.88 -2.3 1,444,185 - CA264_06200 0.88 -0.7 1,444,185 - CA264_06200 0.88 -1.2 1,444,215 + -0.2 1,444,253 + -0.1 1,444,253 + -0.6 1,444,253 + -0.9 1,444,257 - +0.7 1,444,265 + +1.6 1,444,265 + -1.4 1,444,265 + -0.5 1,444,266 - -0.4 1,444,276 - -0.2 1,444,327 + +0.0 1,444,328 - -0.5 1,444,470 - CA264_06205 0.17 +0.4 1,444,528 - CA264_06205 0.21 -0.5 1,444,567 + CA264_06205 0.24 -0.5 1,444,583 - CA264_06205 0.26 -0.1 1,444,866 + CA264_06205 0.48 -0.8 1,445,060 + CA264_06205 0.64 -0.1 1,445,061 - CA264_06205 0.64 +0.2 1,445,061 - CA264_06205 0.64 -2.1 1,445,141 + CA264_06205 0.70 -2.1 1,445,250 + CA264_06205 0.79 +0.2
Or see this region's nucleotide sequence