Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05925 and CA264_05930 are separated by 20 nucleotides CA264_05930 and CA264_05935 are separated by 164 nucleotides
CA264_05925: CA264_05925 - hypothetical protein, at 1,382,063 to 1,384,291
_05925
CA264_05930: CA264_05930 - glyoxalase, at 1,384,312 to 1,384,746
_05930
CA264_05935: CA264_05935 - hypothetical protein, at 1,384,911 to 1,387,817
_05935
Position (kb)
1384
1385 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1383.347 kb on + strand, within CA264_05925 at 1383.348 kb on - strand, within CA264_05925 at 1383.354 kb on + strand, within CA264_05925 at 1383.356 kb on + strand, within CA264_05925 at 1383.373 kb on - strand, within CA264_05925 at 1383.373 kb on - strand, within CA264_05925 at 1383.435 kb on + strand, within CA264_05925 at 1383.541 kb on + strand, within CA264_05925 at 1383.598 kb on - strand, within CA264_05925 at 1383.598 kb on - strand, within CA264_05925 at 1383.655 kb on + strand, within CA264_05925 at 1383.655 kb on + strand, within CA264_05925 at 1383.711 kb on + strand, within CA264_05925 at 1383.711 kb on + strand, within CA264_05925 at 1383.712 kb on - strand, within CA264_05925 at 1383.713 kb on + strand, within CA264_05925 at 1383.714 kb on - strand, within CA264_05925 at 1383.750 kb on + strand, within CA264_05925 at 1383.906 kb on + strand, within CA264_05925 at 1383.958 kb on + strand, within CA264_05925 at 1383.971 kb on + strand, within CA264_05925 at 1383.972 kb on - strand, within CA264_05925 at 1383.972 kb on - strand, within CA264_05925 at 1384.012 kb on - strand, within CA264_05925 at 1384.017 kb on - strand, within CA264_05925 at 1384.017 kb on - strand, within CA264_05925 at 1384.017 kb on - strand, within CA264_05925 at 1384.069 kb on + strand at 1384.069 kb on + strand at 1384.070 kb on - strand at 1384.070 kb on - strand at 1384.076 kb on + strand at 1384.077 kb on - strand at 1384.077 kb on - strand at 1384.101 kb on + strand at 1384.102 kb on - strand at 1384.145 kb on + strand at 1384.146 kb on - strand at 1384.150 kb on + strand at 1384.188 kb on + strand at 1384.189 kb on - strand at 1384.190 kb on + strand at 1384.190 kb on + strand at 1384.191 kb on - strand at 1384.194 kb on + strand at 1384.210 kb on - strand at 1384.290 kb on - strand at 1384.290 kb on - strand at 1384.295 kb on + strand at 1384.296 kb on - strand at 1384.310 kb on - strand at 1384.325 kb on + strand at 1384.340 kb on + strand at 1384.341 kb on - strand at 1384.518 kb on + strand, within CA264_05930 at 1384.649 kb on - strand, within CA264_05930 at 1384.738 kb on - strand at 1384.738 kb on - strand at 1384.739 kb on + strand at 1384.739 kb on + strand at 1384.744 kb on + strand at 1384.744 kb on + strand at 1384.745 kb on - strand at 1384.749 kb on - strand at 1384.788 kb on + strand at 1384.791 kb on - strand at 1384.791 kb on - strand at 1384.794 kb on + strand at 1384.794 kb on + strand at 1384.795 kb on - strand at 1384.812 kb on - strand at 1384.867 kb on - strand at 1384.887 kb on + strand at 1384.904 kb on + strand at 1384.905 kb on - strand at 1384.905 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 1,383,347 + CA264_05925 0.58 -2.0 1,383,348 - CA264_05925 0.58 -0.1 1,383,354 + CA264_05925 0.58 -1.0 1,383,356 + CA264_05925 0.58 -2.4 1,383,373 - CA264_05925 0.59 -0.9 1,383,373 - CA264_05925 0.59 +0.7 1,383,435 + CA264_05925 0.62 -0.0 1,383,541 + CA264_05925 0.66 -0.6 1,383,598 - CA264_05925 0.69 +0.1 1,383,598 - CA264_05925 0.69 -1.3 1,383,655 + CA264_05925 0.71 -1.0 1,383,655 + CA264_05925 0.71 -2.6 1,383,711 + CA264_05925 0.74 -1.6 1,383,711 + CA264_05925 0.74 -2.3 1,383,712 - CA264_05925 0.74 -0.2 1,383,713 + CA264_05925 0.74 -1.0 1,383,714 - CA264_05925 0.74 -0.3 1,383,750 + CA264_05925 0.76 -1.4 1,383,906 + CA264_05925 0.83 -1.5 1,383,958 + CA264_05925 0.85 +0.1 1,383,971 + CA264_05925 0.86 +0.2 1,383,972 - CA264_05925 0.86 -0.9 1,383,972 - CA264_05925 0.86 -0.6 1,384,012 - CA264_05925 0.87 -0.2 1,384,017 - CA264_05925 0.88 -0.9 1,384,017 - CA264_05925 0.88 -0.4 1,384,017 - CA264_05925 0.88 +0.3 1,384,069 + -0.7 1,384,069 + -1.4 1,384,070 - -1.3 1,384,070 - -0.4 1,384,076 + -1.9 1,384,077 - -0.7 1,384,077 - +0.2 1,384,101 + -0.5 1,384,102 - -0.6 1,384,145 + -1.9 1,384,146 - -0.5 1,384,150 + -0.4 1,384,188 + -1.4 1,384,189 - -0.3 1,384,190 + -0.4 1,384,190 + +0.3 1,384,191 - -1.0 1,384,194 + -1.2 1,384,210 - +0.3 1,384,290 - -0.0 1,384,290 - -0.0 1,384,295 + -0.8 1,384,296 - -0.1 1,384,310 - -0.6 1,384,325 + -1.9 1,384,340 + -0.0 1,384,341 - +1.3 1,384,518 + CA264_05930 0.47 -0.3 1,384,649 - CA264_05930 0.77 -0.4 1,384,738 - +0.4 1,384,738 - -0.7 1,384,739 + +1.6 1,384,739 + -0.8 1,384,744 + +0.2 1,384,744 + -0.6 1,384,745 - +0.6 1,384,749 - +0.7 1,384,788 + +0.6 1,384,791 - -1.6 1,384,791 - +0.7 1,384,794 + +0.0 1,384,794 + -1.5 1,384,795 - +0.9 1,384,812 - -1.0 1,384,867 - +0.3 1,384,887 + +0.1 1,384,904 + -0.2 1,384,905 - +2.6 1,384,905 - +0.0
Or see this region's nucleotide sequence