Experiment: m.b. Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02640 and CA264_02645 are separated by 522 nucleotides CA264_02645 and CA264_02650 are separated by 122 nucleotides
CA264_02640: CA264_02640 - SWFGD domain-containing protein, at 610,915 to 611,886
_02640
CA264_02645: CA264_02645 - hypothetical protein, at 612,409 to 612,795
_02645
CA264_02650: CA264_02650 - DNA topoisomerase III, at 612,918 to 615,365
_02650
Position (kb) 612
613 Strain fitness (log2 ratio) -2
-1
0
1 at 611.466 kb on - strand, within CA264_02640 at 611.474 kb on + strand, within CA264_02640 at 611.539 kb on + strand, within CA264_02640 at 611.600 kb on + strand, within CA264_02640 at 611.613 kb on - strand, within CA264_02640 at 611.617 kb on - strand, within CA264_02640 at 611.639 kb on + strand, within CA264_02640 at 611.639 kb on + strand, within CA264_02640 at 611.640 kb on - strand, within CA264_02640 at 611.640 kb on - strand, within CA264_02640 at 611.725 kb on - strand, within CA264_02640 at 611.805 kb on - strand at 611.807 kb on + strand at 611.861 kb on + strand at 611.876 kb on + strand at 611.876 kb on + strand at 611.877 kb on - strand at 611.887 kb on - strand at 611.892 kb on - strand at 611.892 kb on - strand at 611.892 kb on - strand at 611.897 kb on + strand at 611.902 kb on + strand at 611.919 kb on + strand at 611.985 kb on + strand at 611.985 kb on + strand at 611.985 kb on + strand at 611.985 kb on + strand at 611.986 kb on - strand at 611.986 kb on - strand at 611.990 kb on + strand at 611.990 kb on + strand at 612.017 kb on + strand at 612.042 kb on + strand at 612.047 kb on + strand at 612.140 kb on - strand at 612.157 kb on + strand at 612.159 kb on + strand at 612.319 kb on - strand at 612.346 kb on + strand at 612.346 kb on + strand at 612.346 kb on + strand at 612.346 kb on + strand at 612.347 kb on - strand at 612.347 kb on - strand at 612.383 kb on - strand at 612.391 kb on - strand at 612.394 kb on - strand at 612.420 kb on + strand at 612.420 kb on + strand at 612.435 kb on + strand at 612.435 kb on + strand at 612.459 kb on - strand, within CA264_02645 at 612.459 kb on - strand, within CA264_02645 at 612.504 kb on - strand, within CA264_02645 at 612.504 kb on - strand, within CA264_02645 at 612.504 kb on - strand, within CA264_02645 at 612.509 kb on + strand, within CA264_02645 at 612.580 kb on - strand, within CA264_02645 at 612.643 kb on - strand, within CA264_02645 at 612.687 kb on + strand, within CA264_02645 at 612.687 kb on + strand, within CA264_02645 at 612.721 kb on + strand, within CA264_02645 at 612.722 kb on - strand, within CA264_02645 at 612.723 kb on + strand, within CA264_02645 at 612.728 kb on + strand, within CA264_02645 at 612.753 kb on + strand, within CA264_02645 at 612.754 kb on - strand, within CA264_02645 at 612.763 kb on - strand at 612.794 kb on - strand at 612.794 kb on - strand at 612.854 kb on + strand at 612.855 kb on - strand at 612.933 kb on + strand at 612.995 kb on + strand at 612.996 kb on - strand at 613.255 kb on + strand, within CA264_02650 at 613.351 kb on + strand, within CA264_02650 at 613.586 kb on - strand, within CA264_02650 at 613.586 kb on - strand, within CA264_02650 at 613.612 kb on - strand, within CA264_02650 at 613.792 kb on + strand, within CA264_02650 at 613.792 kb on + strand, within CA264_02650 at 613.792 kb on + strand, within CA264_02650 at 613.792 kb on + strand, within CA264_02650 at 613.793 kb on - strand, within CA264_02650
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.016 mg/ml remove 611,466 - CA264_02640 0.57 +0.3 611,474 + CA264_02640 0.58 -0.7 611,539 + CA264_02640 0.64 -0.5 611,600 + CA264_02640 0.70 -0.2 611,613 - CA264_02640 0.72 -1.3 611,617 - CA264_02640 0.72 +0.1 611,639 + CA264_02640 0.74 -1.5 611,639 + CA264_02640 0.74 -0.3 611,640 - CA264_02640 0.75 +0.1 611,640 - CA264_02640 0.75 +0.6 611,725 - CA264_02640 0.83 -0.0 611,805 - -1.7 611,807 + -0.0 611,861 + -0.1 611,876 + +1.1 611,876 + -0.2 611,877 - +0.2 611,887 - +0.6 611,892 - -0.7 611,892 - +0.2 611,892 - +0.3 611,897 + -0.6 611,902 + -1.1 611,919 + -0.2 611,985 + +0.4 611,985 + -0.5 611,985 + -0.1 611,985 + -1.0 611,986 - -0.3 611,986 - +0.8 611,990 + +1.4 611,990 + -0.5 612,017 + -1.1 612,042 + +0.8 612,047 + +0.2 612,140 - -0.3 612,157 + +0.2 612,159 + +1.3 612,319 - +1.6 612,346 + +0.2 612,346 + +0.8 612,346 + +0.3 612,346 + -1.4 612,347 - -0.7 612,347 - -0.7 612,383 - -0.5 612,391 - +0.4 612,394 - -1.0 612,420 + +1.0 612,420 + -2.1 612,435 + -0.0 612,435 + +1.0 612,459 - CA264_02645 0.13 +0.4 612,459 - CA264_02645 0.13 -0.6 612,504 - CA264_02645 0.25 -0.7 612,504 - CA264_02645 0.25 -1.0 612,504 - CA264_02645 0.25 -1.8 612,509 + CA264_02645 0.26 +0.7 612,580 - CA264_02645 0.44 -1.1 612,643 - CA264_02645 0.60 +1.1 612,687 + CA264_02645 0.72 -0.0 612,687 + CA264_02645 0.72 +1.0 612,721 + CA264_02645 0.81 -0.4 612,722 - CA264_02645 0.81 +0.4 612,723 + CA264_02645 0.81 -0.9 612,728 + CA264_02645 0.82 -0.1 612,753 + CA264_02645 0.89 -0.1 612,754 - CA264_02645 0.89 -0.2 612,763 - -0.5 612,794 - -1.1 612,794 - -0.0 612,854 + -0.1 612,855 - -1.3 612,933 + +0.1 612,995 + -1.2 612,996 - +0.1 613,255 + CA264_02650 0.14 -0.3 613,351 + CA264_02650 0.18 -1.4 613,586 - CA264_02650 0.27 +0.4 613,586 - CA264_02650 0.27 -0.5 613,612 - CA264_02650 0.28 +0.2 613,792 + CA264_02650 0.36 +0.1 613,792 + CA264_02650 0.36 -0.5 613,792 + CA264_02650 0.36 -1.8 613,792 + CA264_02650 0.36 -0.2 613,793 - CA264_02650 0.36 -0.3
Or see this region's nucleotide sequence