Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3658 and Echvi_3659 are separated by 196 nucleotides Echvi_3659 and Echvi_3660 are separated by 58 nucleotides Echvi_3660 and Echvi_3661 are separated by 79 nucleotides
Echvi_3658: Echvi_3658 - hypothetical protein, at 4,344,537 to 4,346,222
_3658
Echvi_3659: Echvi_3659 - hypothetical protein, at 4,346,419 to 4,347,459
_3659
Echvi_3660: Echvi_3660 - ADP-ribose pyrophosphatase, at 4,347,518 to 4,347,931
_3660
Echvi_3661: Echvi_3661 - hypothetical protein, at 4,348,011 to 4,350,167
_3661
Position (kb)
4346
4347
4348 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4345.590 kb on + strand, within Echvi_3658 at 4345.590 kb on + strand, within Echvi_3658 at 4345.591 kb on - strand, within Echvi_3658 at 4345.596 kb on - strand, within Echvi_3658 at 4345.640 kb on + strand, within Echvi_3658 at 4345.678 kb on + strand, within Echvi_3658 at 4345.679 kb on - strand, within Echvi_3658 at 4345.749 kb on + strand, within Echvi_3658 at 4345.749 kb on + strand, within Echvi_3658 at 4345.770 kb on - strand, within Echvi_3658 at 4345.773 kb on - strand, within Echvi_3658 at 4345.854 kb on + strand, within Echvi_3658 at 4345.902 kb on + strand, within Echvi_3658 at 4345.902 kb on + strand, within Echvi_3658 at 4345.902 kb on + strand, within Echvi_3658 at 4345.903 kb on - strand, within Echvi_3658 at 4345.903 kb on - strand, within Echvi_3658 at 4345.937 kb on + strand, within Echvi_3658 at 4345.938 kb on - strand, within Echvi_3658 at 4346.028 kb on - strand, within Echvi_3658 at 4346.029 kb on + strand, within Echvi_3658 at 4346.038 kb on + strand, within Echvi_3658 at 4346.066 kb on + strand at 4346.098 kb on + strand at 4346.099 kb on - strand at 4346.127 kb on - strand at 4346.182 kb on - strand at 4346.192 kb on + strand at 4346.193 kb on - strand at 4346.252 kb on - strand at 4346.252 kb on - strand at 4346.261 kb on - strand at 4346.281 kb on - strand at 4346.291 kb on + strand at 4346.292 kb on - strand at 4346.294 kb on - strand at 4346.302 kb on - strand at 4346.336 kb on + strand at 4346.369 kb on + strand at 4346.369 kb on + strand at 4346.390 kb on + strand at 4346.391 kb on - strand at 4346.391 kb on - strand at 4346.394 kb on + strand at 4346.396 kb on + strand at 4346.397 kb on - strand at 4346.450 kb on + strand at 4346.451 kb on - strand at 4346.451 kb on - strand at 4346.515 kb on + strand at 4346.538 kb on + strand, within Echvi_3659 at 4346.538 kb on + strand, within Echvi_3659 at 4346.539 kb on - strand, within Echvi_3659 at 4346.539 kb on - strand, within Echvi_3659 at 4346.539 kb on - strand, within Echvi_3659 at 4346.543 kb on - strand, within Echvi_3659 at 4346.628 kb on + strand, within Echvi_3659 at 4346.643 kb on - strand, within Echvi_3659 at 4346.651 kb on + strand, within Echvi_3659 at 4346.688 kb on - strand, within Echvi_3659 at 4346.752 kb on - strand, within Echvi_3659 at 4346.798 kb on + strand, within Echvi_3659 at 4346.798 kb on + strand, within Echvi_3659 at 4346.830 kb on - strand, within Echvi_3659 at 4346.830 kb on - strand, within Echvi_3659 at 4346.898 kb on - strand, within Echvi_3659 at 4347.021 kb on - strand, within Echvi_3659 at 4347.044 kb on + strand, within Echvi_3659 at 4347.044 kb on + strand, within Echvi_3659 at 4347.045 kb on - strand, within Echvi_3659 at 4347.055 kb on + strand, within Echvi_3659 at 4347.055 kb on + strand, within Echvi_3659 at 4347.075 kb on + strand, within Echvi_3659 at 4347.109 kb on + strand, within Echvi_3659 at 4347.109 kb on + strand, within Echvi_3659 at 4347.110 kb on - strand, within Echvi_3659 at 4347.110 kb on - strand, within Echvi_3659 at 4347.112 kb on - strand, within Echvi_3659 at 4347.112 kb on - strand, within Echvi_3659 at 4347.112 kb on - strand, within Echvi_3659 at 4347.112 kb on - strand, within Echvi_3659 at 4347.130 kb on + strand, within Echvi_3659 at 4347.144 kb on + strand, within Echvi_3659 at 4347.224 kb on - strand, within Echvi_3659 at 4347.224 kb on - strand, within Echvi_3659 at 4347.226 kb on + strand, within Echvi_3659 at 4347.291 kb on - strand, within Echvi_3659 at 4347.291 kb on - strand, within Echvi_3659 at 4347.352 kb on + strand, within Echvi_3659 at 4347.353 kb on - strand, within Echvi_3659 at 4347.353 kb on - strand, within Echvi_3659 at 4347.353 kb on - strand, within Echvi_3659 at 4347.353 kb on - strand, within Echvi_3659 at 4347.498 kb on + strand at 4347.543 kb on - strand at 4347.587 kb on + strand, within Echvi_3660 at 4347.607 kb on - strand, within Echvi_3660 at 4347.637 kb on + strand, within Echvi_3660 at 4347.637 kb on + strand, within Echvi_3660 at 4347.703 kb on + strand, within Echvi_3660 at 4347.704 kb on - strand, within Echvi_3660 at 4347.709 kb on + strand, within Echvi_3660 at 4347.736 kb on + strand, within Echvi_3660 at 4347.779 kb on + strand, within Echvi_3660 at 4347.780 kb on - strand, within Echvi_3660 at 4347.883 kb on + strand, within Echvi_3660 at 4347.884 kb on - strand, within Echvi_3660 at 4347.907 kb on - strand at 4347.971 kb on - strand at 4347.985 kb on + strand at 4347.985 kb on + strand at 4347.991 kb on - strand at 4348.104 kb on + strand at 4348.106 kb on + strand at 4348.106 kb on + strand at 4348.106 kb on + strand at 4348.107 kb on - strand at 4348.107 kb on - strand at 4348.107 kb on - strand at 4348.140 kb on + strand at 4348.141 kb on - strand at 4348.206 kb on + strand at 4348.206 kb on + strand at 4348.206 kb on + strand at 4348.207 kb on - strand at 4348.236 kb on - strand, within Echvi_3661 at 4348.250 kb on - strand, within Echvi_3661 at 4348.267 kb on + strand, within Echvi_3661 at 4348.315 kb on - strand, within Echvi_3661 at 4348.315 kb on - strand, within Echvi_3661 at 4348.315 kb on - strand, within Echvi_3661 at 4348.348 kb on + strand, within Echvi_3661 at 4348.349 kb on - strand, within Echvi_3661 at 4348.393 kb on - strand, within Echvi_3661 at 4348.420 kb on + strand, within Echvi_3661 at 4348.421 kb on - strand, within Echvi_3661 at 4348.441 kb on - strand, within Echvi_3661 at 4348.455 kb on + strand, within Echvi_3661 at 4348.455 kb on + strand, within Echvi_3661 at 4348.457 kb on + strand, within Echvi_3661
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 4,345,590 + Echvi_3658 0.62 -1.0 4,345,590 + Echvi_3658 0.62 +0.4 4,345,591 - Echvi_3658 0.63 -0.2 4,345,596 - Echvi_3658 0.63 +1.2 4,345,640 + Echvi_3658 0.65 -1.0 4,345,678 + Echvi_3658 0.68 -0.9 4,345,679 - Echvi_3658 0.68 +1.4 4,345,749 + Echvi_3658 0.72 +1.4 4,345,749 + Echvi_3658 0.72 -0.2 4,345,770 - Echvi_3658 0.73 +0.0 4,345,773 - Echvi_3658 0.73 +0.6 4,345,854 + Echvi_3658 0.78 +0.6 4,345,902 + Echvi_3658 0.81 +0.1 4,345,902 + Echvi_3658 0.81 +0.2 4,345,902 + Echvi_3658 0.81 -1.7 4,345,903 - Echvi_3658 0.81 +0.4 4,345,903 - Echvi_3658 0.81 -2.1 4,345,937 + Echvi_3658 0.83 +1.3 4,345,938 - Echvi_3658 0.83 +0.8 4,346,028 - Echvi_3658 0.88 -1.0 4,346,029 + Echvi_3658 0.88 -1.2 4,346,038 + Echvi_3658 0.89 +0.7 4,346,066 + +0.7 4,346,098 + +0.5 4,346,099 - -1.5 4,346,127 - -0.5 4,346,182 - -1.0 4,346,192 + +0.0 4,346,193 - -1.6 4,346,252 - -1.2 4,346,252 - +1.0 4,346,261 - +0.9 4,346,281 - -0.6 4,346,291 + +0.1 4,346,292 - +1.2 4,346,294 - -1.4 4,346,302 - -0.6 4,346,336 + -0.3 4,346,369 + +1.0 4,346,369 + -2.5 4,346,390 + +0.4 4,346,391 - +0.7 4,346,391 - -0.6 4,346,394 + -0.3 4,346,396 + +0.6 4,346,397 - +0.5 4,346,450 + -0.8 4,346,451 - +0.5 4,346,451 - +2.1 4,346,515 + +1.9 4,346,538 + Echvi_3659 0.11 +0.0 4,346,538 + Echvi_3659 0.11 -1.2 4,346,539 - Echvi_3659 0.12 -0.9 4,346,539 - Echvi_3659 0.12 -2.6 4,346,539 - Echvi_3659 0.12 +0.4 4,346,543 - Echvi_3659 0.12 +0.9 4,346,628 + Echvi_3659 0.20 +0.7 4,346,643 - Echvi_3659 0.22 -0.8 4,346,651 + Echvi_3659 0.22 +0.2 4,346,688 - Echvi_3659 0.26 -0.9 4,346,752 - Echvi_3659 0.32 -0.8 4,346,798 + Echvi_3659 0.36 +0.2 4,346,798 + Echvi_3659 0.36 +0.2 4,346,830 - Echvi_3659 0.39 -1.0 4,346,830 - Echvi_3659 0.39 -1.3 4,346,898 - Echvi_3659 0.46 +0.5 4,347,021 - Echvi_3659 0.58 +0.6 4,347,044 + Echvi_3659 0.60 -1.1 4,347,044 + Echvi_3659 0.60 -2.9 4,347,045 - Echvi_3659 0.60 -0.0 4,347,055 + Echvi_3659 0.61 +0.3 4,347,055 + Echvi_3659 0.61 +0.1 4,347,075 + Echvi_3659 0.63 -0.6 4,347,109 + Echvi_3659 0.66 -0.6 4,347,109 + Echvi_3659 0.66 -1.4 4,347,110 - Echvi_3659 0.66 -0.2 4,347,110 - Echvi_3659 0.66 -0.3 4,347,112 - Echvi_3659 0.67 -0.2 4,347,112 - Echvi_3659 0.67 -1.0 4,347,112 - Echvi_3659 0.67 -0.1 4,347,112 - Echvi_3659 0.67 -1.2 4,347,130 + Echvi_3659 0.68 -0.7 4,347,144 + Echvi_3659 0.70 +1.3 4,347,224 - Echvi_3659 0.77 -1.8 4,347,224 - Echvi_3659 0.77 -0.6 4,347,226 + Echvi_3659 0.78 +0.2 4,347,291 - Echvi_3659 0.84 -0.5 4,347,291 - Echvi_3659 0.84 +0.4 4,347,352 + Echvi_3659 0.90 +1.5 4,347,353 - Echvi_3659 0.90 -0.8 4,347,353 - Echvi_3659 0.90 -0.8 4,347,353 - Echvi_3659 0.90 +0.0 4,347,353 - Echvi_3659 0.90 +0.3 4,347,498 + +1.8 4,347,543 - +1.8 4,347,587 + Echvi_3660 0.17 +0.0 4,347,607 - Echvi_3660 0.21 +0.8 4,347,637 + Echvi_3660 0.29 +1.1 4,347,637 + Echvi_3660 0.29 +0.0 4,347,703 + Echvi_3660 0.45 +1.6 4,347,704 - Echvi_3660 0.45 +0.5 4,347,709 + Echvi_3660 0.46 -0.2 4,347,736 + Echvi_3660 0.53 -0.3 4,347,779 + Echvi_3660 0.63 +2.4 4,347,780 - Echvi_3660 0.63 +0.2 4,347,883 + Echvi_3660 0.88 -0.7 4,347,884 - Echvi_3660 0.88 -0.8 4,347,907 - +0.6 4,347,971 - +0.5 4,347,985 + -1.5 4,347,985 + +0.4 4,347,991 - -1.6 4,348,104 + +0.8 4,348,106 + -1.6 4,348,106 + -0.9 4,348,106 + -0.5 4,348,107 - -0.8 4,348,107 - -0.5 4,348,107 - -1.0 4,348,140 + -2.8 4,348,141 - +0.2 4,348,206 + -0.1 4,348,206 + +1.0 4,348,206 + -0.5 4,348,207 - -0.5 4,348,236 - Echvi_3661 0.10 +0.6 4,348,250 - Echvi_3661 0.11 -0.1 4,348,267 + Echvi_3661 0.12 -1.5 4,348,315 - Echvi_3661 0.14 -1.6 4,348,315 - Echvi_3661 0.14 -0.5 4,348,315 - Echvi_3661 0.14 +1.3 4,348,348 + Echvi_3661 0.16 -1.9 4,348,349 - Echvi_3661 0.16 -0.6 4,348,393 - Echvi_3661 0.18 -0.4 4,348,420 + Echvi_3661 0.19 -0.5 4,348,421 - Echvi_3661 0.19 +0.7 4,348,441 - Echvi_3661 0.20 -1.9 4,348,455 + Echvi_3661 0.21 -0.1 4,348,455 + Echvi_3661 0.21 +0.4 4,348,457 + Echvi_3661 0.21 -0.6
Or see this region's nucleotide sequence