Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3634

Experiment: L-Leucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_3633 and Echvi_3634 are separated by 126 nucleotidesEchvi_3634 and Echvi_3635 are separated by 596 nucleotides Echvi_3633: Echvi_3633 - Domain of Unknown Function (DUF1080)., at 4,314,134 to 4,315,519 _3633 Echvi_3634: Echvi_3634 - Predicted dehydrogenases and related proteins, at 4,315,646 to 4,316,995 _3634 Echvi_3635: Echvi_3635 - Predicted dehydrogenases and related proteins, at 4,317,592 to 4,318,911 _3635 Position (kb) 4315 4316 4317Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4314.672 kb on + strand, within Echvi_3633at 4314.678 kb on - strand, within Echvi_3633at 4314.678 kb on - strand, within Echvi_3633at 4314.710 kb on - strand, within Echvi_3633at 4314.728 kb on - strand, within Echvi_3633at 4314.767 kb on + strand, within Echvi_3633at 4314.781 kb on + strand, within Echvi_3633at 4314.830 kb on + strand, within Echvi_3633at 4314.830 kb on + strand, within Echvi_3633at 4314.830 kb on + strand, within Echvi_3633at 4314.830 kb on + strand, within Echvi_3633at 4314.830 kb on + strand, within Echvi_3633at 4314.830 kb on + strand, within Echvi_3633at 4314.830 kb on + strand, within Echvi_3633at 4314.831 kb on - strand, within Echvi_3633at 4314.831 kb on - strand, within Echvi_3633at 4314.831 kb on - strand, within Echvi_3633at 4314.841 kb on + strand, within Echvi_3633at 4314.841 kb on + strand, within Echvi_3633at 4314.842 kb on - strand, within Echvi_3633at 4314.866 kb on + strand, within Echvi_3633at 4314.867 kb on - strand, within Echvi_3633at 4314.895 kb on - strand, within Echvi_3633at 4314.895 kb on - strand, within Echvi_3633at 4314.907 kb on + strand, within Echvi_3633at 4314.908 kb on - strand, within Echvi_3633at 4314.908 kb on - strand, within Echvi_3633at 4314.968 kb on - strand, within Echvi_3633at 4315.046 kb on + strand, within Echvi_3633at 4315.046 kb on + strand, within Echvi_3633at 4315.046 kb on + strand, within Echvi_3633at 4315.046 kb on + strand, within Echvi_3633at 4315.246 kb on + strand, within Echvi_3633at 4315.247 kb on - strand, within Echvi_3633at 4315.272 kb on + strand, within Echvi_3633at 4315.329 kb on + strand, within Echvi_3633at 4315.329 kb on + strand, within Echvi_3633at 4315.330 kb on - strand, within Echvi_3633at 4315.341 kb on + strand, within Echvi_3633at 4315.342 kb on - strand, within Echvi_3633at 4315.351 kb on - strand, within Echvi_3633at 4315.365 kb on - strand, within Echvi_3633at 4315.512 kb on + strandat 4315.512 kb on + strandat 4315.512 kb on + strandat 4315.513 kb on - strandat 4315.513 kb on - strandat 4315.518 kb on - strandat 4315.660 kb on + strandat 4315.660 kb on + strandat 4315.663 kb on + strandat 4315.663 kb on + strandat 4315.663 kb on + strandat 4315.663 kb on + strandat 4315.759 kb on - strandat 4315.780 kb on + strandat 4315.781 kb on - strand, within Echvi_3634at 4315.783 kb on - strand, within Echvi_3634at 4315.817 kb on + strand, within Echvi_3634at 4315.818 kb on - strand, within Echvi_3634at 4315.820 kb on + strand, within Echvi_3634at 4315.820 kb on + strand, within Echvi_3634at 4315.820 kb on + strand, within Echvi_3634at 4315.820 kb on + strand, within Echvi_3634at 4315.820 kb on + strand, within Echvi_3634at 4315.821 kb on - strand, within Echvi_3634at 4315.821 kb on - strand, within Echvi_3634at 4315.821 kb on - strand, within Echvi_3634at 4315.852 kb on - strand, within Echvi_3634at 4315.852 kb on - strand, within Echvi_3634at 4315.863 kb on - strand, within Echvi_3634at 4315.957 kb on + strand, within Echvi_3634at 4315.981 kb on - strand, within Echvi_3634at 4316.058 kb on + strand, within Echvi_3634at 4316.058 kb on + strand, within Echvi_3634at 4316.058 kb on + strand, within Echvi_3634at 4316.058 kb on + strand, within Echvi_3634at 4316.058 kb on + strand, within Echvi_3634at 4316.058 kb on + strand, within Echvi_3634at 4316.058 kb on + strand, within Echvi_3634at 4316.059 kb on - strand, within Echvi_3634at 4316.059 kb on - strand, within Echvi_3634at 4316.059 kb on - strand, within Echvi_3634at 4316.059 kb on - strand, within Echvi_3634at 4316.059 kb on - strand, within Echvi_3634at 4316.059 kb on - strand, within Echvi_3634at 4316.059 kb on - strand, within Echvi_3634at 4316.060 kb on + strand, within Echvi_3634at 4316.060 kb on + strand, within Echvi_3634at 4316.060 kb on + strand, within Echvi_3634at 4316.060 kb on + strand, within Echvi_3634at 4316.060 kb on + strand, within Echvi_3634at 4316.060 kb on + strand, within Echvi_3634at 4316.060 kb on + strand, within Echvi_3634at 4316.060 kb on + strand, within Echvi_3634at 4316.060 kb on + strand, within Echvi_3634at 4316.061 kb on - strand, within Echvi_3634at 4316.061 kb on - strand, within Echvi_3634at 4316.061 kb on - strand, within Echvi_3634at 4316.061 kb on - strand, within Echvi_3634at 4316.064 kb on + strand, within Echvi_3634at 4316.265 kb on + strand, within Echvi_3634at 4316.265 kb on + strand, within Echvi_3634at 4316.340 kb on - strand, within Echvi_3634at 4316.360 kb on + strand, within Echvi_3634at 4316.362 kb on + strand, within Echvi_3634at 4316.362 kb on + strand, within Echvi_3634at 4316.407 kb on + strand, within Echvi_3634at 4316.407 kb on + strand, within Echvi_3634at 4316.408 kb on - strand, within Echvi_3634at 4316.408 kb on - strand, within Echvi_3634at 4316.478 kb on + strand, within Echvi_3634at 4316.479 kb on - strand, within Echvi_3634at 4316.493 kb on - strand, within Echvi_3634at 4316.493 kb on - strand, within Echvi_3634at 4316.522 kb on + strand, within Echvi_3634at 4316.522 kb on + strand, within Echvi_3634at 4316.522 kb on + strand, within Echvi_3634at 4316.522 kb on + strand, within Echvi_3634at 4316.523 kb on - strand, within Echvi_3634at 4316.523 kb on - strand, within Echvi_3634at 4316.523 kb on - strand, within Echvi_3634at 4316.541 kb on + strand, within Echvi_3634at 4316.546 kb on - strand, within Echvi_3634at 4316.557 kb on + strand, within Echvi_3634at 4316.558 kb on - strand, within Echvi_3634at 4316.675 kb on - strand, within Echvi_3634at 4316.696 kb on - strand, within Echvi_3634at 4316.696 kb on - strand, within Echvi_3634at 4316.701 kb on - strand, within Echvi_3634at 4316.781 kb on - strand, within Echvi_3634at 4316.873 kb on - strandat 4316.895 kb on + strandat 4316.895 kb on + strandat 4316.895 kb on + strandat 4316.895 kb on + strandat 4316.895 kb on + strandat 4316.895 kb on + strandat 4316.896 kb on - strandat 4316.896 kb on - strandat 4316.924 kb on - strandat 4316.990 kb on - strandat 4316.993 kb on + strandat 4316.993 kb on + strandat 4316.993 kb on + strandat 4316.994 kb on - strandat 4316.994 kb on - strandat 4316.994 kb on - strandat 4316.994 kb on - strandat 4316.994 kb on - strandat 4317.000 kb on - strandat 4317.001 kb on + strandat 4317.001 kb on + strandat 4317.002 kb on - strandat 4317.014 kb on + strandat 4317.059 kb on - strandat 4317.125 kb on + strandat 4317.126 kb on - strandat 4317.371 kb on + strandat 4317.394 kb on + strandat 4317.394 kb on + strandat 4317.394 kb on + strandat 4317.395 kb on - strandat 4317.401 kb on - strandat 4317.401 kb on - strandat 4317.413 kb on - strandat 4317.418 kb on - strandat 4317.495 kb on + strandat 4317.495 kb on + strandat 4317.496 kb on - strandat 4317.496 kb on - strandat 4317.510 kb on + strandat 4317.574 kb on + strandat 4317.575 kb on - strandat 4317.649 kb on + strandat 4317.649 kb on + strandat 4317.649 kb on + strandat 4317.650 kb on - strandat 4317.698 kb on - strandat 4317.698 kb on - strandat 4317.699 kb on + strandat 4317.708 kb on + strandat 4317.760 kb on + strand, within Echvi_3635at 4317.766 kb on - strand, within Echvi_3635at 4317.778 kb on - strand, within Echvi_3635at 4317.806 kb on + strand, within Echvi_3635at 4317.806 kb on + strand, within Echvi_3635at 4317.807 kb on - strand, within Echvi_3635at 4317.807 kb on - strand, within Echvi_3635at 4317.807 kb on - strand, within Echvi_3635at 4317.810 kb on + strand, within Echvi_3635at 4317.810 kb on + strand, within Echvi_3635at 4317.811 kb on - strand, within Echvi_3635at 4317.811 kb on - strand, within Echvi_3635at 4317.811 kb on - strand, within Echvi_3635at 4317.811 kb on - strand, within Echvi_3635at 4317.811 kb on - strand, within Echvi_3635at 4317.811 kb on - strand, within Echvi_3635at 4317.812 kb on + strand, within Echvi_3635at 4317.812 kb on + strand, within Echvi_3635at 4317.812 kb on + strand, within Echvi_3635at 4317.812 kb on + strand, within Echvi_3635at 4317.812 kb on + strand, within Echvi_3635at 4317.813 kb on - strand, within Echvi_3635at 4317.813 kb on - strand, within Echvi_3635at 4317.839 kb on - strand, within Echvi_3635at 4317.870 kb on + strand, within Echvi_3635at 4317.871 kb on - strand, within Echvi_3635at 4317.893 kb on + strand, within Echvi_3635at 4317.894 kb on - strand, within Echvi_3635at 4317.896 kb on - strand, within Echvi_3635at 4317.910 kb on + strand, within Echvi_3635at 4317.947 kb on + strand, within Echvi_3635at 4317.947 kb on + strand, within Echvi_3635at 4317.947 kb on + strand, within Echvi_3635at 4317.948 kb on - strand, within Echvi_3635at 4317.948 kb on - strand, within Echvi_3635at 4317.948 kb on - strand, within Echvi_3635at 4317.948 kb on - strand, within Echvi_3635

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (N)
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4,314,672 + Echvi_3633 0.39 -0.6
4,314,678 - Echvi_3633 0.39 +0.8
4,314,678 - Echvi_3633 0.39 -0.5
4,314,710 - Echvi_3633 0.42 -1.7
4,314,728 - Echvi_3633 0.43 +1.9
4,314,767 + Echvi_3633 0.46 -0.5
4,314,781 + Echvi_3633 0.47 -1.3
4,314,830 + Echvi_3633 0.50 -0.8
4,314,830 + Echvi_3633 0.50 +2.3
4,314,830 + Echvi_3633 0.50 +0.8
4,314,830 + Echvi_3633 0.50 +0.0
4,314,830 + Echvi_3633 0.50 -1.6
4,314,830 + Echvi_3633 0.50 +1.1
4,314,830 + Echvi_3633 0.50 +0.2
4,314,831 - Echvi_3633 0.50 -0.7
4,314,831 - Echvi_3633 0.50 -2.5
4,314,831 - Echvi_3633 0.50 +0.5
4,314,841 + Echvi_3633 0.51 +0.8
4,314,841 + Echvi_3633 0.51 +2.6
4,314,842 - Echvi_3633 0.51 -2.2
4,314,866 + Echvi_3633 0.53 -1.0
4,314,867 - Echvi_3633 0.53 -1.0
4,314,895 - Echvi_3633 0.55 -1.0
4,314,895 - Echvi_3633 0.55 -0.6
4,314,907 + Echvi_3633 0.56 -1.3
4,314,908 - Echvi_3633 0.56 -0.2
4,314,908 - Echvi_3633 0.56 +0.7
4,314,968 - Echvi_3633 0.60 -1.6
4,315,046 + Echvi_3633 0.66 -0.5
4,315,046 + Echvi_3633 0.66 -2.0
4,315,046 + Echvi_3633 0.66 -2.4
4,315,046 + Echvi_3633 0.66 +0.1
4,315,246 + Echvi_3633 0.80 +0.8
4,315,247 - Echvi_3633 0.80 +2.3
4,315,272 + Echvi_3633 0.82 +1.3
4,315,329 + Echvi_3633 0.86 +0.1
4,315,329 + Echvi_3633 0.86 +0.9
4,315,330 - Echvi_3633 0.86 +0.2
4,315,341 + Echvi_3633 0.87 +0.0
4,315,342 - Echvi_3633 0.87 +0.2
4,315,351 - Echvi_3633 0.88 -1.5
4,315,365 - Echvi_3633 0.89 +0.5
4,315,512 + -2.0
4,315,512 + -1.4
4,315,512 + -2.4
4,315,513 - +0.5
4,315,513 - -1.1
4,315,518 - -1.2
4,315,660 + -1.7
4,315,660 + -0.3
4,315,663 + -0.8
4,315,663 + -0.1
4,315,663 + -0.5
4,315,663 + +0.3
4,315,759 - +0.0
4,315,780 + +0.6
4,315,781 - Echvi_3634 0.10 -0.6
4,315,783 - Echvi_3634 0.10 +0.6
4,315,817 + Echvi_3634 0.13 +1.2
4,315,818 - Echvi_3634 0.13 +0.6
4,315,820 + Echvi_3634 0.13 -0.2
4,315,820 + Echvi_3634 0.13 -0.2
4,315,820 + Echvi_3634 0.13 +2.3
4,315,820 + Echvi_3634 0.13 -0.1
4,315,820 + Echvi_3634 0.13 -0.5
4,315,821 - Echvi_3634 0.13 +0.6
4,315,821 - Echvi_3634 0.13 +1.0
4,315,821 - Echvi_3634 0.13 -0.2
4,315,852 - Echvi_3634 0.15 +0.4
4,315,852 - Echvi_3634 0.15 +1.5
4,315,863 - Echvi_3634 0.16 +0.6
4,315,957 + Echvi_3634 0.23 -0.5
4,315,981 - Echvi_3634 0.25 +1.3
4,316,058 + Echvi_3634 0.31 +0.7
4,316,058 + Echvi_3634 0.31 +1.1
4,316,058 + Echvi_3634 0.31 -0.4
4,316,058 + Echvi_3634 0.31 -0.7
4,316,058 + Echvi_3634 0.31 -0.2
4,316,058 + Echvi_3634 0.31 -0.3
4,316,058 + Echvi_3634 0.31 -1.6
4,316,059 - Echvi_3634 0.31 -0.8
4,316,059 - Echvi_3634 0.31 -0.9
4,316,059 - Echvi_3634 0.31 +2.2
4,316,059 - Echvi_3634 0.31 -0.4
4,316,059 - Echvi_3634 0.31 +0.8
4,316,059 - Echvi_3634 0.31 -0.8
4,316,059 - Echvi_3634 0.31 +0.3
4,316,060 + Echvi_3634 0.31 -1.0
4,316,060 + Echvi_3634 0.31 -0.5
4,316,060 + Echvi_3634 0.31 -2.1
4,316,060 + Echvi_3634 0.31 -0.6
4,316,060 + Echvi_3634 0.31 -2.3
4,316,060 + Echvi_3634 0.31 -0.3
4,316,060 + Echvi_3634 0.31 +1.1
4,316,060 + Echvi_3634 0.31 -0.1
4,316,060 + Echvi_3634 0.31 -0.9
4,316,061 - Echvi_3634 0.31 -0.1
4,316,061 - Echvi_3634 0.31 -0.0
4,316,061 - Echvi_3634 0.31 -0.7
4,316,061 - Echvi_3634 0.31 -1.6
4,316,064 + Echvi_3634 0.31 -1.2
4,316,265 + Echvi_3634 0.46 +2.1
4,316,265 + Echvi_3634 0.46 +0.1
4,316,340 - Echvi_3634 0.51 +0.3
4,316,360 + Echvi_3634 0.53 -0.7
4,316,362 + Echvi_3634 0.53 +1.0
4,316,362 + Echvi_3634 0.53 -0.0
4,316,407 + Echvi_3634 0.56 -1.0
4,316,407 + Echvi_3634 0.56 -0.8
4,316,408 - Echvi_3634 0.56 +0.3
4,316,408 - Echvi_3634 0.56 +2.9
4,316,478 + Echvi_3634 0.62 -1.1
4,316,479 - Echvi_3634 0.62 +1.1
4,316,493 - Echvi_3634 0.63 -0.2
4,316,493 - Echvi_3634 0.63 +1.5
4,316,522 + Echvi_3634 0.65 -1.4
4,316,522 + Echvi_3634 0.65 -0.0
4,316,522 + Echvi_3634 0.65 -1.5
4,316,522 + Echvi_3634 0.65 +1.6
4,316,523 - Echvi_3634 0.65 +0.2
4,316,523 - Echvi_3634 0.65 -0.1
4,316,523 - Echvi_3634 0.65 +0.6
4,316,541 + Echvi_3634 0.66 -0.6
4,316,546 - Echvi_3634 0.67 -2.9
4,316,557 + Echvi_3634 0.67 -0.2
4,316,558 - Echvi_3634 0.68 -1.6
4,316,675 - Echvi_3634 0.76 -1.1
4,316,696 - Echvi_3634 0.78 +1.5
4,316,696 - Echvi_3634 0.78 +0.7
4,316,701 - Echvi_3634 0.78 +0.8
4,316,781 - Echvi_3634 0.84 -0.7
4,316,873 - -1.0
4,316,895 + +0.3
4,316,895 + +1.0
4,316,895 + -1.6
4,316,895 + -0.8
4,316,895 + -0.7
4,316,895 + -0.3
4,316,896 - -0.7
4,316,896 - +0.0
4,316,924 - -1.1
4,316,990 - -0.5
4,316,993 + -0.2
4,316,993 + -1.7
4,316,993 + -0.1
4,316,994 - -1.1
4,316,994 - +1.3
4,316,994 - +2.3
4,316,994 - +0.4
4,316,994 - -0.8
4,317,000 - +0.2
4,317,001 + -0.7
4,317,001 + +0.7
4,317,002 - +0.4
4,317,014 + +0.3
4,317,059 - -0.3
4,317,125 + +1.2
4,317,126 - +0.7
4,317,371 + -1.5
4,317,394 + -1.2
4,317,394 + -0.7
4,317,394 + -2.3
4,317,395 - -2.4
4,317,401 - -1.4
4,317,401 - -2.3
4,317,413 - -0.8
4,317,418 - +0.0
4,317,495 + +0.3
4,317,495 + -0.2
4,317,496 - -0.2
4,317,496 - -0.9
4,317,510 + +0.5
4,317,574 + -0.1
4,317,575 - +1.1
4,317,649 + +0.9
4,317,649 + +0.6
4,317,649 + -0.8
4,317,650 - -0.6
4,317,698 - +0.0
4,317,698 - -1.7
4,317,699 + -1.2
4,317,708 + -1.2
4,317,760 + Echvi_3635 0.13 -1.7
4,317,766 - Echvi_3635 0.13 -3.4
4,317,778 - Echvi_3635 0.14 +0.2
4,317,806 + Echvi_3635 0.16 +0.1
4,317,806 + Echvi_3635 0.16 -0.7
4,317,807 - Echvi_3635 0.16 -1.2
4,317,807 - Echvi_3635 0.16 +1.0
4,317,807 - Echvi_3635 0.16 -1.7
4,317,810 + Echvi_3635 0.17 -1.3
4,317,810 + Echvi_3635 0.17 -1.0
4,317,811 - Echvi_3635 0.17 +1.8
4,317,811 - Echvi_3635 0.17 -0.1
4,317,811 - Echvi_3635 0.17 +0.3
4,317,811 - Echvi_3635 0.17 +0.4
4,317,811 - Echvi_3635 0.17 +0.2
4,317,811 - Echvi_3635 0.17 -0.2
4,317,812 + Echvi_3635 0.17 -0.6
4,317,812 + Echvi_3635 0.17 -2.3
4,317,812 + Echvi_3635 0.17 -0.1
4,317,812 + Echvi_3635 0.17 -0.4
4,317,812 + Echvi_3635 0.17 +0.1
4,317,813 - Echvi_3635 0.17 +1.1
4,317,813 - Echvi_3635 0.17 -0.8
4,317,839 - Echvi_3635 0.19 +1.9
4,317,870 + Echvi_3635 0.21 +0.2
4,317,871 - Echvi_3635 0.21 -0.3
4,317,893 + Echvi_3635 0.23 +0.8
4,317,894 - Echvi_3635 0.23 +2.3
4,317,896 - Echvi_3635 0.23 -2.2
4,317,910 + Echvi_3635 0.24 -2.0
4,317,947 + Echvi_3635 0.27 -0.0
4,317,947 + Echvi_3635 0.27 -0.5
4,317,947 + Echvi_3635 0.27 +2.1
4,317,948 - Echvi_3635 0.27 -0.7
4,317,948 - Echvi_3635 0.27 +0.8
4,317,948 - Echvi_3635 0.27 +0.1
4,317,948 - Echvi_3635 0.27 +0.0

Or see this region's nucleotide sequence