Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1472 and Echvi_1473 are separated by 224 nucleotides Echvi_1473 and Echvi_1474 are separated by 182 nucleotides
Echvi_1472: Echvi_1472 - UDP-glucose 4-epimerase (EC 5.1.3.2) (from data) , at 1,686,915 to 1,687,928
_1472
Echvi_1473: Echvi_1473 - Acyl-CoA dehydrogenases, at 1,688,153 to 1,689,295
_1473
Echvi_1474: Echvi_1474 - Membrane-associated lipoprotein involved in thiamine biosynthesis, at 1,689,478 to 1,690,542
_1474
Position (kb)
1688
1689
1690 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1687.180 kb on + strand, within Echvi_1472 at 1687.180 kb on + strand, within Echvi_1472 at 1687.181 kb on - strand, within Echvi_1472 at 1687.226 kb on + strand, within Echvi_1472 at 1687.227 kb on - strand, within Echvi_1472 at 1687.227 kb on - strand, within Echvi_1472 at 1687.228 kb on + strand, within Echvi_1472 at 1687.228 kb on + strand, within Echvi_1472 at 1687.228 kb on + strand, within Echvi_1472 at 1687.228 kb on + strand, within Echvi_1472 at 1687.229 kb on - strand, within Echvi_1472 at 1687.229 kb on - strand, within Echvi_1472 at 1687.229 kb on - strand, within Echvi_1472 at 1687.256 kb on + strand, within Echvi_1472 at 1687.261 kb on + strand, within Echvi_1472 at 1687.261 kb on + strand, within Echvi_1472 at 1687.262 kb on - strand, within Echvi_1472 at 1687.262 kb on - strand, within Echvi_1472 at 1687.361 kb on + strand, within Echvi_1472 at 1687.361 kb on + strand, within Echvi_1472 at 1687.462 kb on - strand, within Echvi_1472 at 1687.508 kb on + strand, within Echvi_1472 at 1687.508 kb on + strand, within Echvi_1472 at 1687.543 kb on + strand, within Echvi_1472 at 1687.566 kb on + strand, within Echvi_1472 at 1687.566 kb on + strand, within Echvi_1472 at 1687.566 kb on + strand, within Echvi_1472 at 1687.566 kb on + strand, within Echvi_1472 at 1687.566 kb on + strand, within Echvi_1472 at 1687.567 kb on - strand, within Echvi_1472 at 1687.640 kb on - strand, within Echvi_1472 at 1687.643 kb on + strand, within Echvi_1472 at 1687.643 kb on + strand, within Echvi_1472 at 1687.643 kb on + strand, within Echvi_1472 at 1687.644 kb on - strand, within Echvi_1472 at 1687.644 kb on - strand, within Echvi_1472 at 1687.644 kb on - strand, within Echvi_1472 at 1687.872 kb on + strand at 1687.894 kb on + strand at 1687.894 kb on + strand at 1687.935 kb on + strand at 1687.936 kb on - strand at 1687.954 kb on + strand at 1687.974 kb on - strand at 1688.023 kb on + strand at 1688.066 kb on + strand at 1688.066 kb on + strand at 1688.066 kb on + strand at 1688.067 kb on - strand at 1688.095 kb on + strand at 1688.140 kb on + strand at 1688.140 kb on + strand at 1688.140 kb on + strand at 1688.143 kb on + strand at 1688.143 kb on + strand at 1688.143 kb on + strand at 1688.143 kb on + strand at 1688.144 kb on - strand at 1688.149 kb on + strand at 1688.150 kb on - strand at 1688.152 kb on + strand at 1688.152 kb on + strand at 1688.153 kb on - strand at 1688.318 kb on - strand, within Echvi_1473 at 1688.330 kb on + strand, within Echvi_1473 at 1688.361 kb on - strand, within Echvi_1473 at 1688.361 kb on - strand, within Echvi_1473 at 1688.361 kb on - strand, within Echvi_1473 at 1688.361 kb on - strand, within Echvi_1473 at 1688.364 kb on + strand, within Echvi_1473 at 1688.364 kb on + strand, within Echvi_1473 at 1688.365 kb on - strand, within Echvi_1473 at 1688.447 kb on - strand, within Echvi_1473 at 1688.447 kb on - strand, within Echvi_1473 at 1688.447 kb on - strand, within Echvi_1473 at 1688.563 kb on + strand, within Echvi_1473 at 1688.564 kb on - strand, within Echvi_1473 at 1688.594 kb on + strand, within Echvi_1473 at 1688.595 kb on - strand, within Echvi_1473 at 1688.595 kb on - strand, within Echvi_1473 at 1688.595 kb on - strand, within Echvi_1473 at 1688.687 kb on - strand, within Echvi_1473 at 1688.815 kb on + strand, within Echvi_1473 at 1688.815 kb on + strand, within Echvi_1473 at 1688.815 kb on + strand, within Echvi_1473 at 1688.815 kb on + strand, within Echvi_1473 at 1688.816 kb on - strand, within Echvi_1473 at 1688.816 kb on - strand, within Echvi_1473 at 1688.816 kb on - strand, within Echvi_1473 at 1688.816 kb on - strand, within Echvi_1473 at 1688.816 kb on - strand, within Echvi_1473 at 1688.816 kb on - strand, within Echvi_1473 at 1688.827 kb on - strand, within Echvi_1473 at 1688.839 kb on - strand, within Echvi_1473 at 1688.839 kb on - strand, within Echvi_1473 at 1688.941 kb on + strand, within Echvi_1473 at 1688.942 kb on - strand, within Echvi_1473 at 1688.942 kb on - strand, within Echvi_1473 at 1688.942 kb on - strand, within Echvi_1473 at 1688.946 kb on - strand, within Echvi_1473 at 1688.946 kb on - strand, within Echvi_1473 at 1689.004 kb on + strand, within Echvi_1473 at 1689.087 kb on - strand, within Echvi_1473 at 1689.087 kb on - strand, within Echvi_1473 at 1689.087 kb on - strand, within Echvi_1473 at 1689.090 kb on + strand, within Echvi_1473 at 1689.132 kb on + strand, within Echvi_1473 at 1689.165 kb on + strand, within Echvi_1473 at 1689.165 kb on + strand, within Echvi_1473 at 1689.166 kb on - strand, within Echvi_1473 at 1689.285 kb on + strand at 1689.285 kb on + strand at 1689.286 kb on - strand at 1689.286 kb on - strand at 1689.286 kb on - strand at 1689.286 kb on - strand at 1689.305 kb on + strand at 1689.306 kb on - strand at 1689.338 kb on + strand at 1689.356 kb on - strand at 1689.356 kb on - strand at 1689.437 kb on + strand at 1689.442 kb on + strand at 1689.444 kb on + strand at 1689.449 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,687,180 + Echvi_1472 0.26 -2.5 1,687,180 + Echvi_1472 0.26 -1.7 1,687,181 - Echvi_1472 0.26 -0.8 1,687,226 + Echvi_1472 0.31 -1.4 1,687,227 - Echvi_1472 0.31 -0.4 1,687,227 - Echvi_1472 0.31 -1.3 1,687,228 + Echvi_1472 0.31 +0.6 1,687,228 + Echvi_1472 0.31 -1.5 1,687,228 + Echvi_1472 0.31 -2.8 1,687,228 + Echvi_1472 0.31 -1.7 1,687,229 - Echvi_1472 0.31 -1.0 1,687,229 - Echvi_1472 0.31 +0.6 1,687,229 - Echvi_1472 0.31 -0.2 1,687,256 + Echvi_1472 0.34 +1.6 1,687,261 + Echvi_1472 0.34 -1.9 1,687,261 + Echvi_1472 0.34 -1.0 1,687,262 - Echvi_1472 0.34 +2.6 1,687,262 - Echvi_1472 0.34 +1.6 1,687,361 + Echvi_1472 0.44 -1.9 1,687,361 + Echvi_1472 0.44 +0.4 1,687,462 - Echvi_1472 0.54 -2.2 1,687,508 + Echvi_1472 0.58 +0.1 1,687,508 + Echvi_1472 0.58 -3.2 1,687,543 + Echvi_1472 0.62 -0.6 1,687,566 + Echvi_1472 0.64 +1.6 1,687,566 + Echvi_1472 0.64 -2.0 1,687,566 + Echvi_1472 0.64 -3.2 1,687,566 + Echvi_1472 0.64 -0.1 1,687,566 + Echvi_1472 0.64 -3.8 1,687,567 - Echvi_1472 0.64 -1.6 1,687,640 - Echvi_1472 0.71 +1.8 1,687,643 + Echvi_1472 0.72 -1.5 1,687,643 + Echvi_1472 0.72 -3.0 1,687,643 + Echvi_1472 0.72 -2.6 1,687,644 - Echvi_1472 0.72 -0.6 1,687,644 - Echvi_1472 0.72 -0.3 1,687,644 - Echvi_1472 0.72 +0.3 1,687,872 + -1.5 1,687,894 + -2.0 1,687,894 + -1.9 1,687,935 + -1.4 1,687,936 - -0.2 1,687,954 + +0.6 1,687,974 - -0.1 1,688,023 + +0.6 1,688,066 + -2.5 1,688,066 + -2.4 1,688,066 + +0.3 1,688,067 - -2.0 1,688,095 + +0.8 1,688,140 + -0.3 1,688,140 + -1.2 1,688,140 + +0.1 1,688,143 + -0.2 1,688,143 + -1.4 1,688,143 + -1.1 1,688,143 + -0.4 1,688,144 - -0.7 1,688,149 + -0.4 1,688,150 - -2.6 1,688,152 + -0.3 1,688,152 + -1.7 1,688,153 - -0.7 1,688,318 - Echvi_1473 0.14 -0.8 1,688,330 + Echvi_1473 0.15 +1.3 1,688,361 - Echvi_1473 0.18 -1.1 1,688,361 - Echvi_1473 0.18 +0.2 1,688,361 - Echvi_1473 0.18 -1.3 1,688,361 - Echvi_1473 0.18 -0.0 1,688,364 + Echvi_1473 0.18 -0.2 1,688,364 + Echvi_1473 0.18 -1.6 1,688,365 - Echvi_1473 0.19 +1.6 1,688,447 - Echvi_1473 0.26 +1.2 1,688,447 - Echvi_1473 0.26 -2.3 1,688,447 - Echvi_1473 0.26 -0.1 1,688,563 + Echvi_1473 0.36 -0.5 1,688,564 - Echvi_1473 0.36 -1.4 1,688,594 + Echvi_1473 0.39 +0.4 1,688,595 - Echvi_1473 0.39 +1.0 1,688,595 - Echvi_1473 0.39 +0.8 1,688,595 - Echvi_1473 0.39 -0.4 1,688,687 - Echvi_1473 0.47 -0.5 1,688,815 + Echvi_1473 0.58 -2.4 1,688,815 + Echvi_1473 0.58 +1.3 1,688,815 + Echvi_1473 0.58 -1.1 1,688,815 + Echvi_1473 0.58 -3.2 1,688,816 - Echvi_1473 0.58 -1.2 1,688,816 - Echvi_1473 0.58 -0.9 1,688,816 - Echvi_1473 0.58 -1.1 1,688,816 - Echvi_1473 0.58 +0.5 1,688,816 - Echvi_1473 0.58 -0.4 1,688,816 - Echvi_1473 0.58 -1.6 1,688,827 - Echvi_1473 0.59 -0.1 1,688,839 - Echvi_1473 0.60 +0.7 1,688,839 - Echvi_1473 0.60 -1.4 1,688,941 + Echvi_1473 0.69 +1.0 1,688,942 - Echvi_1473 0.69 -1.3 1,688,942 - Echvi_1473 0.69 -0.2 1,688,942 - Echvi_1473 0.69 -2.8 1,688,946 - Echvi_1473 0.69 -2.6 1,688,946 - Echvi_1473 0.69 -1.0 1,689,004 + Echvi_1473 0.74 +1.9 1,689,087 - Echvi_1473 0.82 -0.5 1,689,087 - Echvi_1473 0.82 -0.1 1,689,087 - Echvi_1473 0.82 -1.1 1,689,090 + Echvi_1473 0.82 +1.3 1,689,132 + Echvi_1473 0.86 -1.2 1,689,165 + Echvi_1473 0.89 -1.6 1,689,165 + Echvi_1473 0.89 +0.1 1,689,166 - Echvi_1473 0.89 -0.4 1,689,285 + -0.1 1,689,285 + -0.8 1,689,286 - -0.5 1,689,286 - -1.1 1,689,286 - -0.3 1,689,286 - +1.7 1,689,305 + -0.0 1,689,306 - -1.0 1,689,338 + -1.9 1,689,356 - -0.6 1,689,356 - -1.9 1,689,437 + +0.4 1,689,442 + -0.0 1,689,444 + +0.8 1,689,449 + +0.6
Or see this region's nucleotide sequence