Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1262 and Echvi_1263 are separated by 2 nucleotides Echvi_1263 and Echvi_1264 are separated by 312 nucleotides Echvi_1264 and Echvi_1265 are separated by 226 nucleotides
Echvi_1262: Echvi_1262 - asparagine synthase (glutamine-hydrolyzing), at 1,447,288 to 1,449,084
_1262
Echvi_1263: Echvi_1263 - endonuclease III, at 1,449,087 to 1,449,770
_1263
Echvi_1264: Echvi_1264 - hypothetical protein, at 1,450,083 to 1,450,205
_1264
Echvi_1265: Echvi_1265 - hypothetical protein, at 1,450,432 to 1,450,554
_1265
Position (kb)
1450
1451 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1449.124 kb on - strand at 1449.124 kb on - strand at 1449.124 kb on - strand at 1449.145 kb on + strand at 1449.145 kb on + strand at 1449.146 kb on - strand at 1449.146 kb on - strand at 1449.149 kb on - strand at 1449.204 kb on + strand, within Echvi_1263 at 1449.204 kb on + strand, within Echvi_1263 at 1449.204 kb on + strand, within Echvi_1263 at 1449.204 kb on + strand, within Echvi_1263 at 1449.204 kb on + strand, within Echvi_1263 at 1449.204 kb on + strand, within Echvi_1263 at 1449.204 kb on + strand, within Echvi_1263 at 1449.204 kb on + strand, within Echvi_1263 at 1449.205 kb on - strand, within Echvi_1263 at 1449.205 kb on - strand, within Echvi_1263 at 1449.205 kb on - strand, within Echvi_1263 at 1449.205 kb on - strand, within Echvi_1263 at 1449.205 kb on - strand, within Echvi_1263 at 1449.205 kb on - strand, within Echvi_1263 at 1449.205 kb on - strand, within Echvi_1263 at 1449.205 kb on - strand, within Echvi_1263 at 1449.205 kb on - strand, within Echvi_1263 at 1449.208 kb on + strand, within Echvi_1263 at 1449.285 kb on + strand, within Echvi_1263 at 1449.365 kb on + strand, within Echvi_1263 at 1449.365 kb on + strand, within Echvi_1263 at 1449.365 kb on + strand, within Echvi_1263 at 1449.365 kb on + strand, within Echvi_1263 at 1449.366 kb on - strand, within Echvi_1263 at 1449.366 kb on - strand, within Echvi_1263 at 1449.366 kb on - strand, within Echvi_1263 at 1449.366 kb on - strand, within Echvi_1263 at 1449.368 kb on + strand, within Echvi_1263 at 1449.368 kb on + strand, within Echvi_1263 at 1449.368 kb on + strand, within Echvi_1263 at 1449.368 kb on + strand, within Echvi_1263 at 1449.368 kb on + strand, within Echvi_1263 at 1449.368 kb on + strand, within Echvi_1263 at 1449.369 kb on - strand, within Echvi_1263 at 1449.369 kb on - strand, within Echvi_1263 at 1449.369 kb on - strand, within Echvi_1263 at 1449.369 kb on - strand, within Echvi_1263 at 1449.369 kb on - strand, within Echvi_1263 at 1449.369 kb on - strand, within Echvi_1263 at 1449.369 kb on - strand, within Echvi_1263 at 1449.369 kb on - strand, within Echvi_1263 at 1449.369 kb on - strand, within Echvi_1263 at 1449.369 kb on - strand, within Echvi_1263 at 1449.369 kb on - strand, within Echvi_1263 at 1449.369 kb on - strand, within Echvi_1263 at 1449.543 kb on - strand, within Echvi_1263 at 1449.544 kb on + strand, within Echvi_1263 at 1449.545 kb on - strand, within Echvi_1263 at 1449.545 kb on - strand, within Echvi_1263 at 1449.566 kb on + strand, within Echvi_1263 at 1449.567 kb on - strand, within Echvi_1263 at 1449.567 kb on - strand, within Echvi_1263 at 1449.623 kb on + strand, within Echvi_1263 at 1449.655 kb on - strand, within Echvi_1263 at 1449.655 kb on - strand, within Echvi_1263 at 1449.655 kb on - strand, within Echvi_1263 at 1449.655 kb on - strand, within Echvi_1263 at 1449.719 kb on + strand at 1449.719 kb on + strand at 1449.720 kb on - strand at 1449.720 kb on - strand at 1449.741 kb on - strand at 1449.741 kb on - strand at 1449.741 kb on - strand at 1449.741 kb on - strand at 1449.842 kb on - strand at 1449.865 kb on - strand at 1449.946 kb on + strand at 1449.970 kb on + strand at 1449.971 kb on - strand at 1449.971 kb on - strand at 1450.139 kb on + strand, within Echvi_1264 at 1450.189 kb on - strand, within Echvi_1264 at 1450.189 kb on - strand, within Echvi_1264 at 1450.191 kb on - strand, within Echvi_1264 at 1450.203 kb on + strand at 1450.234 kb on + strand at 1450.234 kb on + strand at 1450.312 kb on - strand at 1450.320 kb on - strand at 1450.470 kb on + strand, within Echvi_1265 at 1450.537 kb on + strand, within Echvi_1265 at 1450.537 kb on + strand, within Echvi_1265 at 1450.537 kb on + strand, within Echvi_1265 at 1450.538 kb on - strand, within Echvi_1265 at 1450.538 kb on - strand, within Echvi_1265 at 1450.538 kb on - strand, within Echvi_1265 at 1450.538 kb on - strand, within Echvi_1265 at 1450.538 kb on - strand, within Echvi_1265 at 1450.538 kb on - strand, within Echvi_1265 at 1450.539 kb on + strand, within Echvi_1265 at 1450.539 kb on + strand, within Echvi_1265 at 1450.615 kb on + strand at 1450.639 kb on - strand at 1450.639 kb on - strand at 1450.644 kb on + strand at 1450.645 kb on - strand at 1450.645 kb on - strand at 1450.651 kb on - strand at 1450.668 kb on - strand at 1450.668 kb on - strand at 1450.807 kb on + strand at 1450.808 kb on - strand at 1450.808 kb on - strand at 1450.823 kb on + strand at 1450.976 kb on - strand at 1450.976 kb on - strand at 1450.976 kb on - strand at 1451.007 kb on + strand at 1451.056 kb on - strand at 1451.075 kb on - strand at 1451.075 kb on - strand at 1451.075 kb on - strand at 1451.077 kb on - strand at 1451.077 kb on - strand at 1451.089 kb on + strand at 1451.177 kb on + strand at 1451.177 kb on + strand at 1451.178 kb on - strand at 1451.178 kb on - strand at 1451.184 kb on - strand at 1451.186 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,449,124 - -0.0 1,449,124 - +0.6 1,449,124 - -0.2 1,449,145 + +0.9 1,449,145 + +0.0 1,449,146 - -0.9 1,449,146 - +0.8 1,449,149 - +0.2 1,449,204 + Echvi_1263 0.17 -0.4 1,449,204 + Echvi_1263 0.17 +0.3 1,449,204 + Echvi_1263 0.17 -0.2 1,449,204 + Echvi_1263 0.17 +0.2 1,449,204 + Echvi_1263 0.17 +0.5 1,449,204 + Echvi_1263 0.17 +1.1 1,449,204 + Echvi_1263 0.17 +0.7 1,449,204 + Echvi_1263 0.17 -0.2 1,449,205 - Echvi_1263 0.17 -0.6 1,449,205 - Echvi_1263 0.17 +0.3 1,449,205 - Echvi_1263 0.17 +0.6 1,449,205 - Echvi_1263 0.17 +0.3 1,449,205 - Echvi_1263 0.17 -0.1 1,449,205 - Echvi_1263 0.17 -0.9 1,449,205 - Echvi_1263 0.17 -0.4 1,449,205 - Echvi_1263 0.17 +2.1 1,449,205 - Echvi_1263 0.17 -1.3 1,449,208 + Echvi_1263 0.18 +0.7 1,449,285 + Echvi_1263 0.29 +0.1 1,449,365 + Echvi_1263 0.41 -0.0 1,449,365 + Echvi_1263 0.41 -1.1 1,449,365 + Echvi_1263 0.41 -0.5 1,449,365 + Echvi_1263 0.41 -0.4 1,449,366 - Echvi_1263 0.41 +0.8 1,449,366 - Echvi_1263 0.41 -0.4 1,449,366 - Echvi_1263 0.41 -0.8 1,449,366 - Echvi_1263 0.41 -0.6 1,449,368 + Echvi_1263 0.41 -1.1 1,449,368 + Echvi_1263 0.41 +0.6 1,449,368 + Echvi_1263 0.41 -0.4 1,449,368 + Echvi_1263 0.41 -0.6 1,449,368 + Echvi_1263 0.41 -0.7 1,449,368 + Echvi_1263 0.41 -0.4 1,449,369 - Echvi_1263 0.41 -2.9 1,449,369 - Echvi_1263 0.41 +0.5 1,449,369 - Echvi_1263 0.41 -2.3 1,449,369 - Echvi_1263 0.41 +0.7 1,449,369 - Echvi_1263 0.41 +0.1 1,449,369 - Echvi_1263 0.41 -1.1 1,449,369 - Echvi_1263 0.41 +2.6 1,449,369 - Echvi_1263 0.41 +1.8 1,449,369 - Echvi_1263 0.41 -0.0 1,449,369 - Echvi_1263 0.41 +0.1 1,449,369 - Echvi_1263 0.41 -0.2 1,449,369 - Echvi_1263 0.41 -0.7 1,449,543 - Echvi_1263 0.67 -1.9 1,449,544 + Echvi_1263 0.67 -0.6 1,449,545 - Echvi_1263 0.67 +1.8 1,449,545 - Echvi_1263 0.67 +1.6 1,449,566 + Echvi_1263 0.70 +1.4 1,449,567 - Echvi_1263 0.70 -0.9 1,449,567 - Echvi_1263 0.70 +0.1 1,449,623 + Echvi_1263 0.78 +0.2 1,449,655 - Echvi_1263 0.83 +0.3 1,449,655 - Echvi_1263 0.83 -1.8 1,449,655 - Echvi_1263 0.83 -0.3 1,449,655 - Echvi_1263 0.83 +1.8 1,449,719 + +0.8 1,449,719 + -0.1 1,449,720 - -2.3 1,449,720 - +1.0 1,449,741 - +0.4 1,449,741 - +1.2 1,449,741 - -0.8 1,449,741 - -0.6 1,449,842 - -0.9 1,449,865 - +0.5 1,449,946 + +2.4 1,449,970 + -0.5 1,449,971 - +0.5 1,449,971 - -0.7 1,450,139 + Echvi_1264 0.46 -1.6 1,450,189 - Echvi_1264 0.86 -0.7 1,450,189 - Echvi_1264 0.86 +1.2 1,450,191 - Echvi_1264 0.88 -1.1 1,450,203 + -0.9 1,450,234 + +0.6 1,450,234 + -0.4 1,450,312 - -0.3 1,450,320 - -1.9 1,450,470 + Echvi_1265 0.31 -0.8 1,450,537 + Echvi_1265 0.85 +1.1 1,450,537 + Echvi_1265 0.85 -0.9 1,450,537 + Echvi_1265 0.85 -0.2 1,450,538 - Echvi_1265 0.86 +1.4 1,450,538 - Echvi_1265 0.86 +1.7 1,450,538 - Echvi_1265 0.86 -0.4 1,450,538 - Echvi_1265 0.86 -0.0 1,450,538 - Echvi_1265 0.86 +0.3 1,450,538 - Echvi_1265 0.86 +0.8 1,450,539 + Echvi_1265 0.87 +0.6 1,450,539 + Echvi_1265 0.87 +1.5 1,450,615 + +0.0 1,450,639 - +0.4 1,450,639 - +0.9 1,450,644 + +0.6 1,450,645 - -0.8 1,450,645 - -0.5 1,450,651 - -0.7 1,450,668 - -0.5 1,450,668 - +0.5 1,450,807 + +0.4 1,450,808 - -0.2 1,450,808 - -0.0 1,450,823 + +1.0 1,450,976 - -0.7 1,450,976 - +0.7 1,450,976 - -1.9 1,451,007 + +0.3 1,451,056 - -1.1 1,451,075 - +0.2 1,451,075 - -0.1 1,451,075 - +1.2 1,451,077 - +0.3 1,451,077 - -0.0 1,451,089 + +0.9 1,451,177 + +1.6 1,451,177 + +1.3 1,451,178 - -0.4 1,451,178 - -0.2 1,451,184 - -1.5 1,451,186 + -0.3
Or see this region's nucleotide sequence